Array 1 32-1830 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCML01000015.1 Klebsiella pneumoniae strain COL-Kpn32 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 32 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 93 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 154 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 215 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 276 29 100.0 32 ............................. TCATTTCTGACGCGAATGGCCGACATGCTGGG 337 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 398 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 459 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 520 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 581 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 642 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 703 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 764 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 825 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 886 29 100.0 32 ............................. TAACAGACGTATCATTTATGTTTGCTTACTCT 947 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 1008 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 1069 29 100.0 32 ............................. ATTACATCGTTTTCCGGGTTTCGTTTGAGCAA 1130 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 1191 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 1252 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 1314 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 1375 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 1436 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 1497 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 1558 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 1619 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 1680 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 1741 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 1802 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 30 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGTATCCCTACCGCGACAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //