Array 1 8771-7198 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTXC01000057.1 Enterococcus faecalis strain CVM N59458F N59458F_S25_L001_R1_001_contig_57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 8770 37 97.3 29 ....................................A GTGTTTCCCATAATTAATCATCTCCTTCT 8704 37 97.3 29 ....................................A TTGTACACCTCTTGTTGTTCTAAATGAGT 8638 37 97.3 29 ....................................A CGACCAAAGCGAGCTTCGTGAACGTCTTC 8572 37 97.3 29 ....................................A CCTTACATGTATTTAAACCCAGAAACAAC 8506 37 100.0 29 ..................................... GTTCTGTAAGGCTGTAGATCGGCCGGACT 8440 37 100.0 29 ..................................... GGACTTAACTTCTATAATGACCGGTTAAT 8374 37 97.3 29 ....................................A GTGACAGATGGTAAATCGTTGTTACTTGT 8308 37 100.0 29 ..................................... AAGGGCAAAACTGAAAACGATACAACGAT 8242 37 97.3 29 ....................................A GGGATTGTTGGGATTAGTGAAACATCTGT 8176 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 8110 37 97.3 29 ....................................C ACTTGTCCAATATGAATGTGTTGTTCTAT 8044 37 100.0 29 ..................................... TAGTTATTGAACCTCAACGCACACCATTG 7978 37 100.0 29 ..................................... GTTTTAAATTCATACATAACGAAACATGT 7912 37 97.3 29 ....................................C ATCGCAATGAATAAGTCATCTACGCCGAT 7846 37 97.3 29 ....................................A AATATTTCTTGCTAAAGTCAACAGCGCGA 7780 37 100.0 29 ..................................... TAGAAAAGACGTGACAGAGCAAACAGCGC 7714 37 97.3 29 ....................................A GGTACAATTTATGGATTGTCACATGTCAT 7648 37 100.0 29 ..................................... GATGAAAACCGATGGTATTTACTTTCACA 7582 37 100.0 29 ..................................... TATGCAGAAAAATTAGAGCAGCTGAAAAA 7516 37 97.3 29 ....................................C TCGTTAGAATGCCCTTCACAGCTGTTAAA 7450 37 97.3 29 ..................................T.. CTAATGAGCATTCATTACATATGTAGAAC 7384 35 81.1 114 ......................TT.--.CG......G ATATGATTGATGTAAAAATATCATTGATATGTATAAATATGGTTATTATATAAAAAATATAAGTAACGAATTAAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [7352] 7234 37 67.6 0 A...........C...A....TT.CTT...G..T.GA | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 23 37 96.4 33 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : AGCACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAAAAAATAATTCTCCGAG # Right flank : GAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTAATATTTATAGACGCTTTGTAATGAATGCGCTTTCTACGAAACTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTT # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.30, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //