Array 1 211689-208368 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKDA01000004.1 Klebsiella pneumoniae strain EuSCAPE_FR019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 211688 29 100.0 32 ............................. ACCGGTCTTTATCTCCAGATAGCGAGAGATGT 211627 29 96.6 32 ............................T GGCATCGGCTTCTTTTCTGGTGCGCAAATATT 211566 29 100.0 32 ............................. CGTCCGGCGCCATAGCCTGCAGCCGTCGCCAC 211505 29 100.0 32 ............................. AAACCATCGGCAGAGCAATACCCGGTCGAGCC 211444 29 100.0 32 ............................. GTTCGATCTCCGCATAGAGTGCGGTTCGACCA 211383 29 100.0 32 ............................. CGCGGTTTATTGACGGGGTGTCGTTTGACCTG 211322 29 100.0 32 ............................. GCACACCTCAAAACACTGTTAATATATACAGT 211261 29 100.0 32 ............................. GTACTGGACGCAATGGACAGAGACCAGGTACG 211200 29 100.0 32 ............................. GGTCGCCATGCGTTCATTAGCTTTGCAAACGC 211139 29 100.0 32 ............................. CCCCGGCATTGCGGGGCTCTTTGTTTGTTCCG 211078 29 100.0 32 ............................. GGATCAACTGGCGGCTGATACACCAGTTCATT 211017 29 100.0 32 ............................. CTATCGGGCTGTTCCGGATTAACGGGGAGTGG 210956 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 210895 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 210834 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 210773 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 210712 29 100.0 32 ............................. GATATTACGATCGATGTAGGTGTTACCGGCGT 210651 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 210590 29 96.6 32 .G........................... TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 210529 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 210468 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 210407 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 210346 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 210285 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 210224 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 210163 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 210102 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 210041 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 209980 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 209919 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 209858 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 209797 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 209736 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 209675 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 209614 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 209553 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 209492 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 209431 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 209370 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 209309 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 209248 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 209187 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 209126 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 209065 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 209004 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 208943 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 208881 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 208820 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 208759 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 208698 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 208637 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 208576 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 208515 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 208454 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 208396 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 55 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGGTGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //