Array 1 14-341 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNKX01001097.1 Vibrio parahaemolyticus strain C5_5 C5_5_contig1097, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 ............................ TATGGTCTGTTGTGTGGTTTCTAGCTTTAAGC 74 28 92.9 32 ......TG.................... ACAATACTCTCCTTTTTGGTATCAGAACTAGT 134 28 92.9 32 ........T.C................. ACTAAGATTAGTTGTGTACAGGTTAGGTTTTA 194 28 96.4 32 A........................... AAGCGTTGAAAAGCTTCTTATTCTGTTTGCAG 254 28 96.4 32 ...........A................ TTCACTGAATAGAAGGACTCAACATTCGAGTA 314 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 96.4 32 GTTATCCACCTCACTGGTGGCTTAAAGA # Left flank : TGGAATGGGTCAAG # Right flank : C # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCACCTCACTGGTGGCTTAAAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.80,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [11.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //