Array 1 59859-57301 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXBP01000015.1 Pontibacter actiniarum DSM 19842 Pact_Contig00028_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 59858 30 100.0 37 .............................. AATTCAGGGACCTGGGCGTGTTCCAGAACCGCAACGC 59791 30 100.0 37 .............................. CCTCTCCGACTGGACCGGGCAGGCGTCCCACGACTAC 59724 30 100.0 37 .............................. GTGGAGCTGGACTACCTGAGCGAAAAGTTTGAGAAGG 59657 30 100.0 38 .............................. GCTGGCAGACAAATATAACAAGAGCCTGGCGCAGCACC 59589 30 100.0 37 .............................. TCGCCTATTTTTTCTTTCAGCGCCGTTTTCTGTGCGT 59522 30 100.0 39 .............................. GCACCATCTGGAGAAAGCAAAACCAGAGCACCAAAATCG 59453 30 100.0 37 .............................. TGATGCCGCTGCCTGATCTGTCGGAGCTCATCGTCAC 59386 30 100.0 36 .............................. ACCGCCAGCACCTGGACCTGGTGAAGCTCCTTTACC 59320 30 100.0 35 .............................. GCAGGATTGAGGTCCAACCCATGCACAGGCAGGAA 59255 30 100.0 35 .............................. GAACGACCTGCTGGTGAAGCGCGAGGCGCTGTACC 59190 30 100.0 37 .............................. ATAGTATAGTAATATGGTACAAGGTCGGGGAGTTGTA 59123 30 100.0 36 .............................. GTCGAACAATACCAAAGCCAAAGGCGAGGCCATCAT 59057 30 100.0 37 .............................. TTATTCTGTCGCTGCTAATAAAAACTCTGCTATCTCC 58990 30 100.0 38 .............................. GGTGGTGCCCTCAGTGGTAATATCGTCCGTACTGTTGA 58922 30 100.0 36 .............................. GAAAAAGGAAACAGACAATGCCCAAGCAAATCACAA 58856 30 100.0 38 .............................. GTTGCCCACCTCCGATACGGTGTGCGTGTGGCCAGTGT 58788 30 100.0 38 .............................. CATCTTAGAGACGGAAGTTTCAAGCAAGTATTTCCTAT 58720 30 100.0 36 .............................. GTACGTACCTAAGTACATTAGGACTACTGATATCAA 58654 30 100.0 37 .............................. TCGAAGAAGCCCATCGTTATAGTTGCCACCTTGCTGC 58587 30 100.0 36 .............................. CCGGGCGCAGGCCGTGCAGCTGCGCCAGGCTTACAG 58521 30 100.0 37 .............................. TCAACGACGACCTGGTGATCATCGTGCCGCTGAATAG 58454 30 100.0 36 .............................. GAACTACACCCGCTTCGGGTGTTACCCTACGACCAG 58388 30 100.0 37 .............................. AAGCAAATACAATGGCAATTACAAAAGAAGAGAAGGC 58321 30 100.0 35 .............................. ACACTGCTTAGAAGAAACGAAGTAAATACAGACTT 58256 30 100.0 37 .............................. GCTGCAAAAGGAGCAGGAACGGCAGGCAGAGCGCAAC 58189 30 100.0 39 .............................. TATCCGAGACCAGGCAGTTATTGCCTCGCTTGCCACAAA 58120 30 100.0 35 .............................. CCCGTTGCGCTGCCTGCTCCTGCTTTAGCTTTTGC 58055 30 100.0 35 .............................. AACATGCCGACCACCTCCACTGCAACACCCTCCTG 57990 30 100.0 38 .............................. GCAGGTGGATATTCCAGAGGCGCAGCAGGTGCCCACAT 57922 30 100.0 35 .............................. GTCTAGTAGAACCTTTAAGTACACATTATCCCCAA 57857 30 100.0 36 .............................. TGGGCTGAGGACTTTCACACTGACATAGACGAACCC 57791 30 100.0 37 .............................. ACAAGCGCGGAGGTCGCTTTCTACAGCATTAAACTCA 57724 30 100.0 37 .............................. GATTGGATGGCAAGGGCTAAGTCAAAGACGAAAGCGC 57657 30 100.0 36 .............................. TGCTTTATCCAAGATTGTTGCCTTTATCTGGTCGAA 57591 30 100.0 34 .............................. AATTTGGCGACATAGTCTATGCCGCCCCTGTTAA 57527 30 100.0 36 .............................. AATGTGCAGCACGCCCGCGTCCATGGAGGCCGAGGT 57461 30 100.0 36 .............................. TGCATTCACTTGAAGTATAGCAAAATGCGGTTTAAA 57395 30 100.0 35 .............................. CGCAAGGGCATCATCACCAAGAGCGTGATCGAGAC 57330 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 39 30 100.0 37 CTTTCTATACCTCTAAGGTGCTATTGAAAT # Left flank : GAGGGGGGTTGCGGTAGGCCTCCTGAGCCAGGCGACGC # Right flank : GCAGCCCAAAACTAACAATAAAAAGCCTTTCAGGCTTAATCTGGATGGATTTTAAATAAATAAGCTTTGCCTGAAAAGCGTCATGTGGCGGTAGTGTAAAAAAGACGGGGAGCTGACGACTTATTTAGGTGGCTTACTATCAGTGATTTAAATGTGATTTCAAGCCACTTCTAGCAATATTATGTAACGTATAGGTGTTGTTATCATTCACCTGACGACTACAGAAAACGCTGTGGCTTGCCTTTGTCCACTCCTAAAACATGGCGTTCGTGGTAGCGCTCCTCCCGCATGCGGTAAATTACCACACCGTCTCCTTCCTCCATAAGCATGTTGGCTTCGTGGCGGAGGCGCTGGTATTGGGCTTCTGTTAACTCACCTTCAAACACGGAATTTTGGATCCAGGTGAGGTACCTGCGGAAGAGTTTCAGCATCTTGCCTACGCGCTTCTGGTTTACATCATATACGGCTATAAAGTAAGGCATGTCGTTTAATTTATTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTATACCTCTAAGGTGCTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 997-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXBP01000016.1 Pontibacter actiniarum DSM 19842 Pact_Contig00029_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 996 30 100.0 36 .............................. TCACCTTCTGAAAATCCTACAGCGAAGTGCATCAGG 930 30 100.0 36 .............................. AAAGAACCAGAGGAGATGATAGCCCCTGGCGTATAG 864 30 100.0 38 .............................. TCGATTGTAGCCAAAGACGGGGAAGTTGAGGCGCGTAT 796 30 100.0 35 .............................. GGAGGTCTTCACCTACCCGGGCGATGAGGTGAAAC 731 30 100.0 36 .............................. TGATCACCAGCGAGTGGGCCAACGACACCATAGGCG 665 30 100.0 37 .............................. GTGTACATAAAGATGCACCTACGCGACGCGGAGGAGG 598 30 100.0 37 .............................. GCCTGGTCTGCCTTTGCCTTCAGGGCATTGTAGTCCT 531 30 100.0 38 .............................. ACGCGCGGCTCTTTCGGCTTGCAGTCTTGGGTGTCTTT 463 30 100.0 35 .............................. ACCGCCACACCTTACCGCCTCGATGGCAAAGGGCT 398 30 100.0 35 .............................. CCTTCATGGCCCAGAACTCCTTTATCTTCTCCTCA 333 30 100.0 36 .............................. TGTACCATAGCCGCAGAAACACGCGGGGGTACGCGC 267 30 100.0 37 .............................. TAGCTTTTAGGTATGCGTTTGTCGAATACCTGCAAGC 200 30 100.0 36 .............................. TGGAGATCAGCACACCGTCCGCGGTCCGGTATTGCA 134 30 100.0 35 .............................. GCTCTTCCATTTCTTCTGCTGCCTCTTGGATGCGC 69 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 100.0 36 CTTTCTATACCTCTAAGGTGCTATTGAAAT # Left flank : GCTGGTATACCTCAGCAGAACCGAAATTGAACAGCTCTGCCAAACAATCCACGATGTTCTAAAGGTGCGGGGAGGTTACTGGATAACTTCTGATATTTACATCAAGCATGATTTTGTACAAGGGGCAACCCGGCAGACCAAAGAGTGGGATGCCTTTTTCCAAAAGCAAGGTGCAAGCAACTTCTCTTTTGCGGATTTCCAGGAGGCGCAGGATTTCTTCGAGGCCAATGGGTTCAAGCTCGACAGGGTTGCTGCGCCTGCGTACGAAACGCTAAGTGCAACGCCCAGCCTGTTGGCTGTTGCCAATGAGCAGCAACTGAACGCCTTAAGAAGCGGAGGGCAGGTGCAGGCCACCTGGAGGCTAAGCTGCAAGTAAAGTCAGCGGAAACAGCGTGAGGGCAGGCCGGTTTCTGCAGGTTTGGGAGCCTTGGGATATGGTTGCTGCATCCCTGTCTACTTTTGTCGACAGGGGTGCAGCGGCTTGTGAGGCTAATACTTTA # Right flank : TCTCCTCGTTAAAGGTCCAGTTACCGTTCACATCGTAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTATACCTCTAAGGTGCTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 996-39 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXBP01000007.1 Pontibacter actiniarum DSM 19842 Pact_Contig00014_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 995 30 100.0 36 .............................. TTGTTCAGCTCGTCTATCTTTGCCTGCAAGGCGCGC 929 30 100.0 35 .............................. TTTGGCAACAGAACCTTTAACCTGCGCTCGTCAAT 864 30 100.0 37 .............................. GAGTTCCTGCAGTACGCTGCTGCATAGCGCTCCAATC 797 30 100.0 36 .............................. AGGCGCAGGAAGTAGAGCCGCCAGTAGCCGCCAGCA 731 30 100.0 40 .............................. TAGCCTGCGGCCTGCAGGACCAGGGGTACAAGGCAGGCAG 661 30 100.0 38 .............................. TGCCCAATCCCAAACCAGCACCAACGCGCTATGTCAAG 593 30 100.0 36 .............................. TGAAGGTTTTAGGCGAGTAGGAGCAAACGTTCTGAT 527 30 100.0 35 .............................. TGAAAAAGCAGCAGCAGCTGAGGCCGCACGATTAA 462 30 100.0 36 .............................. CAAGGTCGTCTGCGCCCGCCGCCGAAGGCAAGCCGC 396 30 100.0 35 .............................. GATAATGGATTATGAAGGCGGCGCGCAGGAGCCAG 331 30 100.0 37 .............................. GTAGGCATCAGAGCTTTGCAACCCTGCCCGCTCCAAA 264 30 100.0 36 .............................. GACCGCGAGCATCTCCGTGTCGGTCAGTACGCTCAC 198 30 100.0 34 .............................. CGGGAACATGAGATAAGCCGATTGAAGGGGGAGC 134 30 100.0 36 .............................. GGTGCTTCCAAAATCATGATTGATTACAACTCTGAT 68 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 100.0 36 CTTTCTATACCTCTAAGGTGCTATTGAAAT # Left flank : GTGTCCACAGACCGCACGAAGCTGTGGAAAGCA # Right flank : TGACGTGCACACGCTTAAGAACATGCTGGCGCATGAGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTATACCTCTAAGGTGCTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //