Array 1 114237-114932 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQJ01000001.1 Enterococcus canis NBRC 100695, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 114237 36 100.0 30 .................................... AGTCATCTTAGCTACTTTGAGGTGACTAAT 114303 36 100.0 30 .................................... CACGATCAACTATGCTGGTAGTAGCTTTGC 114369 36 100.0 30 .................................... TACATACTTAAATCTAATTTGTACGCTAAT 114435 36 100.0 30 .................................... AAATCCACACGGAGTTACTGCTGAACAAGT 114501 36 100.0 30 .................................... TGCATTTTGCTTAATATCGAATATTGTACT 114567 36 100.0 30 .................................... GTAATGAAAACCGCTAACGGTATATAGTTT 114633 36 100.0 30 .................................... TTTAGATATTGCGATTGGTGAGGATATAAC 114699 36 100.0 30 .................................... TTGTTCCTCTGGCGTATTTAGGTACTGACC 114765 36 100.0 30 .................................... ATAAACTTATTCTGTATTGTAAACTATAAA 114831 36 100.0 30 .................................... TTTTTGCTATTTTTAGGTGAGTTTTTGTGC 114897 36 86.1 0 ..............................G.TTGT | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.7 30 GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Left flank : CAATGATAGACAAACTGACTGCTACAATCAGTGAACTTATTGGCTATGAACTATTAGAACATGAGTTAGATTTAGAGGAGGATGAAATTACTGTAAATGAGCTGTTTAAAGCATTAGGAATTAAAATTGAAACTACAAGCGATACTATTTTTGAGAAGCTTATTGAAATTGTGCAAGTTTATAAATATTTGTCTAAAAAGAGATTACTCATCTTTTGCAACGTGTATGCTTATTTGGCAGATGAAGAGCGATCCGAATTGCGGGAGTATATTGAACTAAGTAACGTCGATGTTCTCTTTATTGAACCTCGAAAAGTATCTGGAGCGATGCAAGTAATTTTGGACGAAGATTTTTTTCTAACCGAAAAAAACGTGTAACCGATAATTGTTCTTTGACAACTAAATAGTAATACCAACAATTAATGCAATTTGAGACATTTAAAACTAAAGTCTTGCTATGGATGAATAGCGCGATTACGGAACTTCGAAAAAGTCTACGAG # Right flank : TTGGCGTAGAGAAATAATCTTGAATAGTATATTTTTTGAGAGATAATTGCGCTGCAAAAAACCGTAATTTTAGGATTGCGGTTTTTTTATGGTTCTGCAAACCCTATCACATCAGCATGTCTAGTGATTTTGACATAGCTTTTCAGCTACAAAACGGCATACTTCTCCAATACTTTGCTACAATAAAGTTGTGGAAGATTCGAGAAGGAGAGGAGCAATATGAAATTAGGAGAACAGCTAAAACAGCTGCGTTTAGAAAAAGGCTATACGCAAGAAGAATTAGCAAATAAACTTTTTGTGACGCGTCAAACGATTTCCAATTGGGAAACCGAGAAAGGACAACCTGATATTGAGAATATTGTACTGCTAGCGCAAACTTTTGATATTTCAATCGATGAACTAATGACTGGAAAGCGACTAATCATTAGTGAGAAAAATGCTATTGGCAAGAAACATTTTATTGCCTTGATTATTTGGTCAATTGTATTGTTGGCGCTACA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 206625-204035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQJ01000003.1 Enterococcus canis NBRC 100695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 206624 33 100.0 35 ................................. AACGTCTGCCTTCATTTTCTCCATAAATTGGATTG 206556 33 100.0 35 ................................. ACTCCACCACGTTTGGACAAATTAATTTAGAATCT 206488 33 100.0 34 ................................. CTTTTTAACGATGCAGATGTATCGTTGGGAGATT 206421 33 100.0 33 ................................. TCCTCCTACCTGATCCGTGGAACTGGTAGAAAC 206355 33 100.0 34 ................................. TGTAAAGCATACAAATCACTACTAATCAGACTCT 206288 33 100.0 35 ................................. CGCCCACGCCCGTATCATAAGCGGCGGGTGGATAA 206220 33 100.0 35 ................................. CATTTCAACTCGCTCTTGGTAAGCATCCTCGGCGG 206152 33 100.0 34 ................................. GCTACTAAACGAGGTGGGTCAAGGCAAGTCAAAA 206085 33 100.0 33 ................................. CTGTGTGCAAGTCCCCACCGTCCCACACTTTTG 206019 33 100.0 34 ................................. TACTTCGTTTGAATCATCTAAGTTATTAGCGAGT 205952 33 100.0 35 ................................. TAAAAGGAGGTTTGATAGATGGTTAAAGTGTTTAA 205884 33 100.0 35 ................................. AACACGTCAACGGTCTAAAACAAGTTTTAGCTGAC 205816 33 100.0 34 ................................. CCTATGCCCTTGGTGTTTACAATAAAAAAATTAG 205749 33 100.0 33 ................................. ACCCAACGTAACCGTTAAACGTCAACATTTAAA 205683 33 100.0 35 ................................. AAACTGCTAACGATATTTTCGGGATGAACATTAAA 205615 33 100.0 35 ................................. GCCCATAATTGACCAATACCCCGCTGTATAATCAC 205547 33 100.0 33 ................................. CATCTTTCTACGATTTTTTTGAGGTCATTTTTG 205481 33 100.0 34 ................................. CTGACGGCACGTTGCATAATGAGGTTAACGGTTA 205414 33 100.0 34 ................................. GTTTTGCAGTCAGTAAAAATAGCGTGCATTGCAA 205347 33 100.0 33 ................................. ACCATTATCATAACCATTATGAACCGTGGTATG 205281 33 100.0 34 ................................. GGCTAGGAGCTTGGGACGTGGAAAACAACGATAT 205214 33 100.0 35 ................................. ATTTCAAAGAATTGAAATACGACGGAGAGAAAGAA 205146 33 100.0 34 ................................. CGAATACGAAAGGTTATAAGCCTGTACGCCTTGG 205079 33 100.0 35 ................................. TTGCCCTTGCGTATCAGCTCCGATTGAAGTATCTC 205011 33 100.0 34 ................................. TTCATTGTCGTCGTCCTCCTTTTTAACTTCTGTT 204944 33 100.0 35 ................................. AAAAATACCGTTGCCAATTTCTGACTTGTGCCAAT 204876 33 100.0 35 ................................. TCATCCTTCGTGGTGGTGCGCTCAAAAAAAGTAAT 204808 33 100.0 34 ................................. ATCCGTATTGTACTTATAGCGTATTTGCTTTTGA 204741 33 100.0 36 ................................. TCTTTTAGCATTCATAAGAAGCCACCTTTCGATATC 204672 33 100.0 33 ................................. GGTATAGATGGGGTTGATTGCGCTTTTCAAAAA 204606 33 100.0 35 ................................. AAGATAGCTTTTGTGAGCTGGCATATTATCAATAA 204538 33 100.0 33 ................................. CCACTCGTCAGGTAAGTAGTCACTTTCTAAGGC 204472 33 100.0 35 ................................. TTTCATGATTCACCTACTTCCACCAAAAAAGAAGC 204404 33 100.0 34 ................................. ATACTTCCTCCACACTCCCATCAACTAACGTAGC 204337 33 100.0 35 ................................. TCGTAACCAGATGAAAAGTAGGCCAAAGAAAGGGT 204269 33 100.0 35 ................................. CCAAAAGTATTCTAGGTTGTCTAACTCAGCAATCG 204201 33 100.0 35 ................................. AATTTCAAGCTTGTTGATTTTCATTGCCATATGAT 204133 33 100.0 33 ................................. AAACGACTCAAGAAGGAAGTTATCAAATTCCAA 204067 33 87.9 0 ................A.A.........A...A | ========== ====== ====== ====== ================================= ==================================== ================== 39 33 99.7 34 GTCGCTCCTCACTTGAGGGGCGTGGATTGAAAT # Left flank : GATGAATACCCTCCTTTTTTATGGAAGTAGGTGGTTTTTTTTGATGATACTAGTAACTTATGACGTTTCAACAGTGGAAAAAGAAGGAAAGCGGAGACTGAGAAAGGTTGCGAAGATTTGTCAAAATTATGGAATTCGTGTTCAAAATTCGGTGTTCGAATGCGTCGTTAACCAGACGGAATATACGCAAATGAAAATCAAGCTTTTAGCTGTCGTGGATGATCAAGAAGACTCATTAAGAATCTATCGTCTAGGAAAACAGTACAAGAGTAAAGTGGAACATTTTGGAGCGAAAGAGTCTATAAATGTAGAAGAAACGTTAATTTTTTAAAAAAGAAAAGTGGTGCGAATCAAAGGTACACATAAAATTTCTAAGAGATTCGCACCATTAGTTTATGTGTTAGTTAGAGTATTATTAGAAAATACGGATGCTGAAACATCGAAAACAAATATAATATGAAATAAGAAACAAAAATATAGATGAAATTCTTTATTTTTGC # Right flank : TTTTTCTGCCCAATCCCTTGATATACTTAATTTTATCATCGCTATTCATACCAAGAACTAAAATAGAAATCATGCGTACTAATTACAATTCTATGACGTAATATTCACTCGGGTTACCAAAATGATAAACACATCTTCTCTATCTATCGTTAAGCCTCCAGAAAAAGAACCTCTTGAGGTTCTTTTTTGGTATCCACTGATAAACTTCTCATTTTTAAATTTCTAGAAAAAATACTATTCGTCAAATAATTCGATATTGTTTTCACAAACTAACGTAACTGGCAACTGCAAATTTTAATAAAACCATATAATTTGGTGGATAAGGATTACTTATGTTTCTGTAAGATTGTGAAACTTACTCAATTTATATAAAAGCTCCTACCAATTACACTTTGTTAATGAGTGTACGATAATAAAAATGATAAAAATATGAATGTTATCCATTTGTATATAAATACAAATGGAAAGTTGAAAATATTATAAGGATATACAAACTAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCACTTGAGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 2 215149-217483 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQJ01000003.1 Enterococcus canis NBRC 100695, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 215149 33 100.0 34 ................................. GACCCAATAGGGTTTATAATAAGAATGTAGATAA 215216 33 100.0 36 ................................. ACACATGTAGTAGGCAATGGGCAAGTGATCCAAACG 215285 33 100.0 34 ................................. TTTCAACGAACGAACAGCTCAAACAATTACAGCT 215352 33 100.0 35 ................................. ATTAGTTATACCACTTAATGAAAACATATCTGTTT 215420 33 100.0 36 ................................. ATCAACTTGAAGAGTATCGCCTTGAATATCCTAATT 215489 33 100.0 37 ................................. CGCTTTGAAAGATATTCTTATCTTAACAAGTGACAGT 215559 33 100.0 34 ................................. AGGGTATATTGGTTGGGGGCTTGCAAAATTACTT 215626 33 100.0 35 ................................. AACACGTCAACGGTCTAAAACAAGTTTTAGCTGAC 215694 33 100.0 34 ................................. CTGAAAAGGCAAAAATCTTAGATATTAGCAACGT 215761 33 100.0 35 ................................. GCAATATTGCTGACACGGTTCGTCAGTAGCTTATC 215829 33 100.0 35 ................................. TTGAGTGGTTCGGGTTTTGGTGCAGGCACTGGGGT 215897 33 100.0 35 ................................. ATTTCACGCCTCTTTTCGTAGTAAATCCAAATGGC 215965 33 100.0 34 ................................. AACGGCTGAGTAGCTCCCCTCGATGTTGCCGTCG 216032 33 100.0 34 ................................. TTGTAACATACAAGTTTAGTGGGCTGATTAATTC 216099 33 100.0 35 ................................. GCCATGATTATTGACGTAAATGCCTTACGCTATAA 216167 33 100.0 34 ................................. AATTGTCAGCTGATGTGATTATTAGTAAGTTTGA 216234 33 100.0 35 ................................. CTGTGTGCAAGTCCCCACCGTCCCACACTTTTGGC 216302 33 100.0 35 ................................. ATATGCTTTAGGTGTTTATAACAAAAAAATTAGTG 216370 33 100.0 35 ................................. ATCACTAGTGGCATGAGTGGATCGTCAATATAGTC 216438 33 100.0 34 ................................. TTTGGTTTTCCATAACGATTCCTCCTATGAATAG 216505 33 100.0 35 ................................. AATCTCTGAAAAAGCATAATGCTCCAGCAGAAGCA 216573 33 100.0 35 ................................. CGCACAAGCCTTATCCTCACGACCGCCGCTTTCGT 216641 33 100.0 36 ................................. CTCCCACTCTGTTAAATCGGTCGTTAACCGAACAAC 216710 33 100.0 34 ................................. TGATACCCACTATGCTACGGACTCCGTCATTCGT 216777 33 100.0 35 ................................. ATTTTTCACTTGCCATTCGGCCATCGCACCAGCAG 216845 33 100.0 34 ................................. GAGAATTGGCGGATGAAGGGAATATCACTAAAAA 216912 33 100.0 34 ................................. AATCGCCTGTTCGAGTTCAGCTTCACGAGTTTTG 216979 33 100.0 34 ................................. TACCTAAAAAATGACGGAATTTATCAGCTAGGAA 217046 33 100.0 34 ................................. GTTTTTAAAAGGAGATTGGAAATTACCATGGGAG 217113 33 100.0 34 ................................. ATTTTTCAATATTTTCAGTTTCGACTCAGTAGTC 217180 33 100.0 35 ................................. AGATAGGCATAGACGTACGTATCGATTAATCCAAC 217248 33 100.0 35 ................................. AGAAAGCTACTATGGAATATCGTCAGGAAATGGAT 217316 33 100.0 35 ................................. TGTAGGCGGCACTCACATAATGAAATACTACAGAA 217384 33 100.0 34 ................................. AACATCTCCAACGCGCCACCACTCAATGATTCTA 217451 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 35 33 100.0 35 GTCGCTCCTCTTATGGGGAGCGTGGATTGAAAT # Left flank : ATGAGCCATTATCTTTTGAAATGTTGGCCGTTTCTTTTAAATGTTGTACCAGTGGCTGTTTTGCACCATCACTTGTCCTAAAATGTGCTATATACAATTTATTCACCTCACTGTAATTTTATAAAGCTCTCAAAGAAACCGTTTTCTTTAAGTCTAATATAAAATTCACCCCTTCACAAGTACGGTAAGATTCTTACTTATAGTTATATAACCCATCTGCATCATAACCACTGACTAAATTTCCGTTTAGAATTATGTAAATAGATTTAATCGATTCCATAATGCTATAATTGATATGTAAGGGATACCAATTATCATACTTTGAGTCTTTACTAAGCTGCTAGTGCGAACCTGAGGTACACATATTATCCCTAGTGATTCGCACCATAAATTTAGAGTTTATTAGAACTATATGTTAAATACGTGCTACTAATCAAAAATTCTTATTATTTTAGTAAAGAAAAACTAAACAAAATAAGGAAATTATGCCTTATTTTGCA # Right flank : TAAACAATAACTCTAGAATCATTCAACCACCTGCCCATCGCTCCTCATATGAGAACGATAGAAGTTCTTCATCGCAGGAATACCTATCGAGCTTAGATTTCCTCGTTGTACACTCGTGCTCTTTAGAAAGATAGCAAAAATACTCTTCAGTTATAAGAAAATCTACATACTCAAAATATTCTTTTAGACCTTTCCAGTAAAATCACGAAAAGACTTCTTCTTACCATACTCATTAGTGCTAGTATTGGTGCTACTTTCATTTTGACGAATTAGAAAAAGCTAGGAATACCTATGTATCAGCATTCCTAGCTTATTTTTCTCTATTACCCCACAGACCCTTCCATTTCATAACTAATCAAACGATTTAGTTCAACGGCGTATTCCATAGGTAATTCTTTGGTAAATGGTTCCACAAAGCCCATGACGATCATTTCAGTTGCTTCTGATTCGGTCAGGCCGCGGCTCATTAGGTAGTAAAGTTGTTCTTCAGAGATCTTGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTATGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA // Array 3 291223-289472 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQJ01000003.1 Enterococcus canis NBRC 100695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 291222 36 100.0 30 .................................... ATCGCAATTCGCAAGCTAACGGTTCGTGGG 291156 36 100.0 30 .................................... CAAAAAACGGTTTTTCATCATTAGTATCGG 291090 36 100.0 30 .................................... AGCTTGTAAACTATCTGACGTAGTGTAGTT 291024 36 100.0 29 .................................... ACAGACAAGCCCAAGCAAAATAGCAAGCC 290959 36 100.0 30 .................................... CCAGTTTACATTTTACCGCAACACACCATT 290893 36 100.0 30 .................................... CAGATGCTTACAATGCCGCAGTGAATGGGA 290827 36 100.0 30 .................................... TCCAGTCGCCATAGACTCTTGTAAGGTACG 290761 36 100.0 30 .................................... TTTAGTTGTGAAAATTGTTCAAGGTATTGG 290695 36 100.0 30 .................................... TATGATAGTTGATAGCACCTATCACCACGT 290629 36 100.0 30 .................................... TCAACGTCAGACGGATCTACAAGAGTATCC 290563 36 100.0 30 .................................... CGTTCATAGAGCGTGTCGTACACGTTCCCT 290497 36 100.0 30 .................................... TTAAAGATATTTCGCTCCGTAGTGTTAATT 290431 36 100.0 30 .................................... TCAAATTCCGTCTCAAATAAAAAACCATCC 290365 36 100.0 30 .................................... CTTAAAACAATTGCATCCTAAATTTGATTT 290299 36 100.0 30 .................................... CGTCCGCCACCATCTTATTTTTCTTGTACT 290233 36 100.0 30 .................................... ACGCCCAACATTTCAGACAGCTCAACAGCC 290167 36 100.0 30 .................................... AAACTTGTGTACCGATCAAAACAATTGGCG 290101 36 100.0 30 .................................... GGTGATAATTCCCGTCAATTTCTAGGTAAT 290035 36 100.0 30 .................................... TTTTTTCTAGTTGGCGAATAAGTTCCGCAG 289969 36 100.0 30 .................................... CGTAATAGGTCCCTACAGCTGTGACCACAG 289903 36 100.0 30 .................................... AAAAGTTACAACACGGTTACACAGGCAAAG 289837 36 100.0 30 .................................... TGCTGTTAGAGAAGTTACTCTAGGCAAGTA 289771 36 100.0 30 .................................... CCAAAATCATAGAACTGCATTACTTGACCT 289705 36 100.0 30 .................................... GCGCATAGACAGACGAATGTCAACAGTAGG 289639 36 100.0 30 .................................... TCTCGGTGGCTTCCATTGGTTCTTTGGTGT 289573 36 97.2 30 ...........................T........ AACAAGGTTATTTGCTCCCTCGTCTGAGCA 289507 36 77.8 0 ....................A.....TTAAA..C.G | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.1 30 GTTTTTGTACTCTCAAGAAATCAGTAACGGTAAAAC # Left flank : TTGGTTATGGATCAATAATCCTAACGCATTTATCTCGAAAAAAATTCTATCAAAATTTATTTGTAAGTTAAGAAAGGTTTCGGATGATACAAGTCTGCTCCATATCTTTATTATGAGTGATGATTATCTGGAGCTTTCTTATGAATATGAAGATATTTCAAACACGGTTCTTCTTTATGAACGTTATCAACAATTACCTGATTTCGAGAACTTTTGTGATTCATTAGCTCGTTATTATCCAGATGAATTATGTATGGATAATAGACAAATAATTCAATCTTTATACCGAATTTTTCCATATGTAGGTTATCAATCTGATATGCAAGAAGTGTATCTAAAAAATCAAGATATGGTATTATTAAAAGTAGTTAGTCAACTTTTGAATTGCGCTTCCACTGTGAAATGTACGGATTTAGAACGTGCATTATCAATTTTGGAACACAAATTTTTAGTAAACTAACGGAAAAACGAAAATTTCGGATTGGAGACGTCCATTTGAG # Right flank : GCCTCCCAAAGACTACAAATTGTCGCGGGAGGCCTGTTTTCTATTTTCGTTCTGCCTTCTGTATTAGTGCAATCGGAATTGTTCCGAGTCCGGCTCCGAGAATAATTAAGCAGACATTTGCAAGAAAAAGAATCAGGGAACCGCTGAAAATAGCTGAGGATTGTGTGGCGATCCCAAAGCCAATGGTGGCTAAGGGCGGCATAAGTGAGGCGGCAATGGCGACGCCAGGTAAAATATTGCCGGAATCTTTTTTCGCAGAACCAATGATGGCTGCTAGTCCACCAAAGAAAGCTACGATGGCAATGCCGATAGATAAAGAGGTACGGTCAAGAATAGCTTGGTTCACGGTGGCGTCTGGCGCAAGCAAAAAGTAGATTGTAGAGGCAATAATTGCCACGACGATTTGTAAAAATAATAATAGACAACCTTTGAGAAAAAGTTTTTTGTTGCGAAGCACACCACCATAACCGATGCCTAAAAGAGGATCCATCAAAGGTGAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGAAATCAGTAACGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //