Array 1 3293-1729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRWF01000050.1 Flavobacterium psychrophilum strain TR contig57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 3292 46 89.1 30 A.CAAA........................................ ATGGCTTACTTCATAACAGGAGTGATTATG T [3286] 3215 46 100.0 30 .............................................. ATTAATGCGATAATTATCGAAGGTAGCACT 3139 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 3063 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 2987 46 100.0 30 .............................................. AAAAATAATATCCAAAAACTGAAAGAGAAT 2911 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGTTCC 2835 46 100.0 30 .............................................. TATATCCATATTTGAATACACATTGTCACC 2759 46 100.0 29 .............................................. CGTTTTCGCACGTTAAATCAAAGTACTAT 2684 46 100.0 30 .............................................. TTTTAAAAAATGGTTAACTATGATTACTTA 2608 46 100.0 30 .............................................. TTTACTAAGCTAAATGTCGTATATCAAAGT 2532 46 100.0 30 .............................................. AGCCAATACCTTGTGTCCTGTTATGTGTTC 2456 46 100.0 30 .............................................. AAATTATTTAGCAACATAGATGATTGTTTT 2380 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 2305 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 2229 46 100.0 30 .............................................. AGTAGCTAATGTATTCACAATAGACATATT 2153 46 100.0 29 .............................................. AAAACTAAATACATACAGCGTACGAATTC 2078 46 100.0 30 .............................................. TTTCTTTTTTTGAGTCTTTTATAGCTCTTT 2002 46 100.0 29 .............................................. AGTAATAAATGCCCGGTTTGTATGCCGTA 1927 46 100.0 30 .............................................. TGATCATCTGATGAAAATTGCTGTTCAATA 1851 46 100.0 31 .............................................. AAGCATAATGGATGAAAAGAAATACACAGCA 1774 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 21 46 99.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACAAATTTGCGTGGTACATCAAATTAGAAACGCTTGCAGATACGTGGTATGGAAAGATAAAAAACAATTTACATCCGATATGAAACTTGTTTATACCGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTC # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTAATTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //