Array 1 22907-22683 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKJO01000019.1 Geobacillus sp. LEMMJ02 NODE_19_length_52138_cov_16.875, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22906 30 100.0 36 .............................. TCGTCTGAATTTGCCGACAGGGATGGGAAAAACATT 22840 30 100.0 39 .............................. AAAACTGTTTCACACCAAAAATGAGGCTGTATCAAATGA 22771 30 100.0 29 .............................. TCAAAGGGACAAAAGATCGGTCATATTGT 22712 30 90.0 0 ................TA...........C | ========== ====== ====== ====== ============================== ======================================= ================== 4 30 97.5 35 GTTTTTATCGTACCTACGAGGGATTGAAAT # Left flank : TGAGACGATGGATGGGAGAAAGAAAACGCAATTTTTTGATCCTGATGATGAGGTATTCCCCCACTTGATTGAATTGAATTTCTGTCACAAATATGCAGCGTACTATGGTGTTCCGCCAGCGGAACGATTATCGATTCAACCGATCTATGTTCATCGGCGTCATCGTGTGGTCACACTATTCAAGGACATATATATTACAGGCTGGATGGGACATTATCGTCTTTGTTCTTCGCCAGAACAGTTGACATTTTTGTACCACGTCGGTCTTGGCAGTCGAAATTCACAAGGGTTTGGAATGTTTCGCCTCGCAAGTGGATAAACCAGCCGCAAGATTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATAATTTTTGGCGGTTCAGACTTACAGCCATCGAGGTTGAAGGGTATTGACAGAATTTTTGGAACGTGGTACTCTGAAAACAGTGTTAGATCGAAATACTTGATACAACAAGCATTTTTGG # Right flank : TTTGAAATAAAAGAATCATTCGAACCCGATGAGCAGGTACAAGACTGGTTGGGTTGCAGCCAAACCAAAGAAATGATGATGTCGATTCAACAAAGATATGGAAAAAATATTTGGAGATTTATCATCTCGCGCCGAGGAGCCCCCCACTTCCACGCGTGGGCGTAGGTGGGAGAGCGTTCAATGTCCGAGCTTTTGGTTCGTTTGGAGTTGTTTCCATCAGTTGGCTTCACATCATTCGGAAGTAAATGGAGGTTGCAATGCGCTCTAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGCGGACAGTGATCCGCACTGGGGTGACGGCGGTGTTGCCGCATGGGGGCAACTGGTTTTTGGAGAAGGTGCCCGCGGCTTGTTTTGTTTTGAACGGTTTTGGGAAAACGGTCGGGTTG # Questionable array : NO Score: 8.74 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTACGAGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.00,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 29461-30021 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKJO01000019.1 Geobacillus sp. LEMMJ02 NODE_19_length_52138_cov_16.875, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29461 36 100.0 30 .................................... CATTTCGTGTTGTCAATCGCCAGTTTGTTG 29527 36 100.0 30 .................................... GTTGCAATCGTTCCGCTTGCTTCTGCTGTT 29593 36 100.0 29 .................................... CTTCGGTTTGACCCGGAATACGAAAAAAT 29658 36 100.0 28 .................................... TTAAAAACCTTGTCACGATCCTCAGCTG 29722 36 100.0 30 .................................... TTGCTTGTTGGTCTGCTTTAATACGGTTTA 29788 36 100.0 30 .................................... AGCATCTTAACATTAACATCCTTGCCTTTG 29854 36 100.0 30 .................................... TATGCGTCAGTTTGGTAACATCCCAGATCG 29920 36 100.0 30 .................................... ACAACGTTTGAAACTCGTTTACGTCGAGGA 29986 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AAGCTTCGTCACTGCAAGCCGAAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCGTTACAACTGCACGTGTATGAGTAAGTTTATGCGGTTGCTCGTCTTTTTCGATCTTCCCGTCGTGACCAACCGGGAGAAGCGCGAATACCGGCGATTTCGCACATTCCTGCTAAACGAAGGGTACGATATGTTGCAGTTTTCGGTCTACAGCCGCGTCTGCCACGGACATGAAGCAACGGACAAACACTTGGCAAGATTAAAACGCAACTTACCTCCTCGAGGATCGATTCGGGCGATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTTGGGGAACCGACAGCACAAGAAAAGAAAATCACATCCACCCAACTTACACTTTTTTAAAAAAACGGAAATGGTCCCCTTTTTTGCATAAGCATATTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATAGCAGGCTTTTTTGGATACGT # Right flank : CAAACGCATAAAACCATTGTCGTCGATCCCCCGGGATTTTTGCACGATTGGGGGTCGACGACAATGTGAGGCTCGACGGCGAAGAGTCTGCTCTGCTTACCCCTTCACCCGTTCGATCTTCTCAACCGGCAGCCCGGTCAGTTCGTGGATCGTGTCGACATCATACCCTTTCGCCAGCATTCTCTTCACCACGTCGAGCTTCCCTTCCTCAATCCCTTGTTGGCGCCCTTGTTTAATACCTTGTTTGATCCCTTGTTTGACCCCTTGTTCGATTCCCTTCTCGATTCCCTTTTCCATTCCCCGCTGTTCGTACGAGACGATGAGCTCCATCACTTGCTTCGCCTCCTTCGTCTCCATTTGGCTCACCTCGTTTCGCAGTTTGACTTCCTCCTCTTCGGACAACCGCAAATACGTTTCAAAAAAACCGAACAACAGCCGCTGTTTCGCCTCATCGAGCTCAAGGCGGACGAGCATGCGCAAAAATTCTTTTTTCACTTCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 32890-33254 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKJO01000003.1 Geobacillus sp. LEMMJ02 NODE_3_length_243010_cov_17.0167, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 32890 30 100.0 35 .............................. CAACACAGAAAAACCAGCCCAATGACAATATAACA 32955 30 100.0 38 .............................. TCATCATAGCGATAGCGATATTCATGTCGGCACTCAAA 33023 30 100.0 39 .............................. TCCAAGTCACCGACAGACCGTACAAGCCGATCCAATTTG 33092 30 100.0 36 .............................. TATAGCGATCAATGGCCAAAAATACGCGCCGACGCC 33158 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 33225 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 97.8 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 57217-59452 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKJO01000014.1 Geobacillus sp. LEMMJ02 NODE_14_length_64509_cov_17.6224, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================= ================== 57217 28 100.0 38 ............................ AAAAATTCGCGTTGCCGCGCCTGCATTTCCTTATGAAG 57283 28 100.0 36 ............................ GACGCCTAGCCGTTCAAGTGTGTTTGCCGCTTCCTG 57347 28 100.0 103 ............................ TGTAGCAAGCGGCAGACATTCATGCAATCCGTGCGATGTTTAAATCCCTCGCTCATCCGCTTAGGCGACGCCGATGTCGTTGTCGCATGCAATCCGTGCGATG 57478 28 100.0 36 ............................ GAACACGGAAAAAGGCATTGTGAAAAGCGATAAGAG 57542 28 100.0 36 ............................ AACCATTCCAGCCCTCACATTACGCTGAAGTACATG 57606 28 100.0 37 ............................ AAAATGGCTAAATACCGATACATCTATACAACATTTG 57671 28 100.0 36 ............................ TCTACAGCAAGCGCCGCAAAGGACGGGGAGCGCAGG 57735 28 100.0 38 ............................ GCAGAATTAGAAAAGGATGGAAGGTAGTGATGTGAGAG 57801 28 100.0 38 ............................ TTGCTTATTCTCCTTTCAGTTCTCTTGTACAAAAACAG 57867 28 100.0 37 ............................ GACTGTACCGTTTCCACAACTGATCGCCCCGACGATG 57932 28 100.0 36 ............................ TTTCGGCGTCGGCAAAACTCATTTACAAATCGCACG 57996 28 100.0 36 ............................ AAACCGCCTGCAAAAAGATACTAAAGGAGCGTGATG 58060 28 100.0 37 ............................ AATTATGCGACAAGGCCGTGCGGTATAAAGACGAGTG 58125 28 100.0 37 ............................ GCGAACAGGAACGACAACAGTGGACTATTTAAGTACG 58190 28 100.0 39 ............................ GCATTCTTCCTCCTTTTGCTTAAGCAAAACGTGAAAGTG 58257 28 100.0 37 ............................ CAAGAACACTCCCTCATTGGTCGCGAACATTTCAATG 58322 28 100.0 36 ............................ AGCCCGTTTTGCTCTTTCATATCACCAAAAAATTTG 58386 28 100.0 37 ............................ TCGCCTCCCGTCAGCTGCTTGATGAGCGATTCACTGG 58451 28 100.0 37 ............................ GTAACCCCTCGTATCGTCCCCGCCGTCACCGTCCCGG 58516 28 100.0 36 ............................ GGAACGGGACATCAAGTATTTTCCAAGTTATTACGG 58580 28 100.0 36 ............................ TAATTTGCTCCATTATCATTTCTAGTTGCTCTGAAG 58644 28 100.0 36 ............................ GGTAAGATAATCAAGTTTCGCTAATGATGAGAGTAC 58708 28 100.0 37 ............................ GCATTAGGTTTAAATTCGGGATTTTTGGACAAGACTG 58774 28 100.0 36 ............................ ACGGCATTTGACAGTTTCGAGCGAGAATTTAGGCTG 58839 28 100.0 40 ............................ GATTTTTACAGCAAGCGTCGCAAAGGCCGGGGGAGTCAAC 58907 28 100.0 37 ............................ GGTAAGCTCTTTGATGTCATATGGTCAGTCATAAAGC 58972 28 100.0 35 ............................ AATATCTCGCCGTGTTTGGCGACATGCCGACAGCC 59035 28 100.0 36 ............................ CGAGTTTGAGAAAGCGAAGATCCGGGAGCGTACAAC 59099 28 100.0 40 ............................ TCTCGCCGTACAGTTACCAGGTAAAAAAAGACGATTGCCC 59167 28 100.0 37 ............................ CAAGTGTCACCCGGACGACTGCTTTAACGCGTATATC 59232 28 100.0 36 ............................ TCGATATGGAGGCGGGCTTCGACTCGCGTGACCTTC 59296 28 100.0 37 ............................ GCTGGACTTGCCGGAATTCCACGTTATGAACTTGATC 59361 28 100.0 36 ............................ ACGGACGCTACAATAACACGGTCGCCGACTTTTAGC 59425 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================================================================================= ================== 34 28 100.0 39 TTTAAATCCCTCTCCGTTCAGATAAAAC # Left flank : AGAAAAACTCCTTTACGTTCCTTGTGTGTCAAGGATTCATTCGACATCGGAACGAAAAAATCCTCCCGATTTTCGTCGAGAGGGTGCGAAATGTGAGTCAAACGGCAAATCGACACATGTGAGCTGTTGATTTTGGACGAACTCGGCTATGTGCCTTTCCAAAAGCAGGGGTCGGAACTGCTGTTTCACATCATTGCCGATTGTTATGAACGAAAAAGTGTCATCGTGACATCGAATTTAGAGTTTGGACAATGGAATCGGGTGTTTGGGGACAACCGCCTGACGGCAGCGCTGGTGGATCGTTTGGTCCATCACGCCCACATTCTCGCGTTTACGGGAGAGAGCTACCGCTTGCGGCACGCGCTTTCTGCCGTTCAGTCGCTCCCTTCTCACTCGGTTGAAAGATAAATTCATTGAGCAGGCAAGCCTATGTATTTTTTCTTGCAATTCTCTGCACTTTTTGCTTGCAAAAAACAAGCTTTTCAAAGCTATACGCACAT # Right flank : CCCCTATCAGTTACAAAGCAATATTCATTGATGTAGCAGGGAATTCCGGCTAATGCCTACACAACAATTATACCTCATTTTGCAGTAAAGTAGTAATTGTGTTTTCTATGCTGCGCAAATAATGACACACTTCCCTTGATAAATCAAGCTTTTCCCCATTTATCCGCTAAAAGGAGGTTCACTGCAAATTCTTAAAACTTAGAGGAACAACTCATCAAAATTCTTTTCCTGACCAAATACCCGCTTTTTTATATTCTTCGGATTTCCTACTTCGTATAAATAAATGGAGTCTTCTTCTTTATCAATGATCATCTCCAATTCATACATGCACTTCATCAGCAGGCTTTTCGAAATCTCCCCTTCAAATACGCTATTTTGCGTCCAAGTGAGGTATTCCTTTAATTTTTTGCAAACTTTGTTGACCCGCTTTTCCGCTACGTCATACGTAATGATGACAAACATGTTTCACCACCACGCTTTCAACGGTTTATATAGTTCAT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATCCCTCTCCGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //