Array 1 217404-215196 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTSF010000004.1 Francisella philomiragia strain F1094 philomiragia_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 217403 37 100.0 36 ..................................... TTGGTTCGATCTTTAAAACTCTTGCTAGTTCAGCTT 217330 37 100.0 34 ..................................... GCTAGATGGTTTATGGGTGCATCAAAGCCAAGTA 217259 37 100.0 36 ..................................... TTGGTTCGATCTTTAAAACTCTTGCTAGTTCAGCTT 217186 37 100.0 34 ..................................... GCTAGATGGTTTATGGGTGCATCAAAGCCAAGTA 217115 37 100.0 35 ..................................... GTGATAGCACTGTTTTAAGCACCAAAGAAAGATAT 217043 37 100.0 36 ..................................... ATTAGTACTTGATGATGTTATTGTCGGTTTCATGGA 216970 37 100.0 34 ..................................... TTTTAAATATGTATTTTCCCTGTGGAAAAATATT 216899 37 100.0 37 ..................................... TAGTAAGTACCTTTTTGTTAGGTTTCCATTCAATGGA 216825 37 100.0 36 ..................................... AGATGATGTGGTAGGGGATGTTAAAAGAATGATTCT 216752 37 100.0 36 ..................................... TAAAGATGTGGGTTTCTGCGAGCTAGATCCTTTTGT 216679 37 100.0 37 ..................................... GGTAAGCATTTTGAGTGTTAGTTTGTGTTGCTGATTG 216605 37 100.0 35 ..................................... ATTTATGAGGGTGATATTGTTATTAGAGACCTCGA 216533 37 100.0 35 ..................................... GATTATGATTTGTATTACAAGTTTCAAAGCGTTCC 216461 37 100.0 37 ..................................... AACACATTATTGCTTTTGTACCCTCTTCGATATGATT 216387 37 100.0 35 ..................................... CTTATATTGACTGGCAATGCTCAATTTAACTTTGA 216315 37 100.0 34 ..................................... CCATGACGGCAATGCTTGGGTTTCCGGCAATGCT 216244 37 100.0 36 ..................................... TTTAGAATCTCGACAAAAAGGCGGCGGTACTATTGT 216171 37 100.0 34 ..................................... CTTTCACTGGCACAGCTCAATCTGCTATTGCTGT 216100 37 100.0 35 ..................................... CCAGTAGCAACGACACCGCTAGCATGATCTTCTAA 216028 37 100.0 35 ..................................... ATTTATGAGGGTGATATTGTTATTAGAGACCTCGA 215956 37 100.0 35 ..................................... GATTATGATTTGTATTACAAGTTTCAAAGCGTTCC 215884 37 100.0 36 ..................................... AGAAAATGTACATAAAGAAGTAACTTGCAAATATTT 215811 37 100.0 36 ..................................... CAATAGCAGTTTAGCCGTTGGCACATGGATAAATAA 215738 37 100.0 34 ..................................... AAAGAAAGACAAATGATTAATATTGGTAAGTTGG 215667 37 100.0 37 ..................................... GTTTAGTTTCTACAGCTAATAATGTAACATCGCTTGG 215593 37 100.0 34 ..................................... AGAACATTGCCAGTTTAAGATAACGCTGATAGAA 215522 37 100.0 35 ..................................... CGAGATGGCTTAGTTTTCTTAATCATGGGCTTTAC 215450 37 100.0 36 ..................................... CAAAAGAGCAATGATTGCATGGTTCCTAAATTTTTT 215377 37 100.0 35 ..................................... CAAATTGAGGATCAACTTCAACTAACATATGTATA 215305 37 100.0 36 ..................................... AATTTTACTCGCAATTAGGGTTATATTTTTTTAGGT 215232 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 31 37 100.0 35 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : | # Right flank : AGCCAAAATAAACCTAGAGTTTATAAGGCTTTGCGAGAATAATTTATTGGTGTTTTTTCGCAAACACCCTACTTGTCAAAAAAAGTAGACATTTTGCGAAAAAGTATCTAAAATAGATTTTGTACCAAATATTTAATGCTCTGTAATCATTTAAAAGTATTTTGAACGGACCTCTGTTTGACACGTCTGATTGATATAAAACAAAAAATTGCCATTTAAATGGCTTTTTTTGTTTGTGTAAATATGGATTTGATAGATACCCAATCAAGTTGGGTATTACGAATGGTATTTGTATAATGCTTATCGAAATTCCTACTAAATGGCGATCTAAGAAAATCAAGCTGAGTATTGCAAATTAACTCTATACTTTACAGGAACTTGATAGGGTTGATGACCTTTTGCTCTTAGCGATCATTGCAAAAGTTAAGATACTCACATTGTATACATTGATGACCTGTTGCTGATGAATCAGGCTTATTGCCATTATCAAGAGCATTTGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 489-17 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTSF010000016.1 Francisella philomiragia strain F1094 philomiragia_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 488 37 100.0 35 ..................................... GTAATGAGGAGGCTATGAATGGTATTAGGGCAGCT 416 37 100.0 35 ..................................... ATATTTGATTATGGCCAACGAATTTGCGGAACGGT 344 37 100.0 36 ..................................... AATTCCTGCACTAAAAAATAAAAAATATAGTTTGAA 271 37 100.0 35 ..................................... TTCAAAACTTCTGATACTAAAAATTCTTGATAAAT 199 37 100.0 36 ..................................... TAAGTATAGTTGGCTTAACAAGCTTCCATTCATCAA 126 37 100.0 36 ..................................... TTGGTTCGATCTTTAAAACTCTTGCTAGTTCAGCTT 53 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 100.0 36 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : CATTTTGGGCCAATCATAGTAAAAATGCTGAGTTTATATCTGAGCTAATAAACTATATCTATAGCAATAGCGACTATACGAGTATTATAAATAATGATCTTGCTTTGGTTGGTTTCTCTGCTGGAGGATTAGCTACTTTGATAGCGACATCAGAGAATACTAGGGTCAAGCTTTGGATAGGATTAGACCCTGTAGATGTAGGCAATCTTGGCTCTCAAGCCGCCAAGAATATAAATTGCCCAACCTATATAATAGCTGCCTCAGCAAGCGCATGTAATGCCAATAACAACTACAAAAACTTCATAACAAATCTAAAAGAAAACAATCTTATCAAAATTGATGGAGCTGTACATGTCGATGCTGAATGGCCAACTAATAGATTCGCTGAGTTGTTCTGTGGTAGATCCACACAGCAAAAAAGAGAAAGATTTCATGATGATGTGTTGACGATTTTGGATAAGAGTTTTAAAAATGAAAGCTATATACAAAATATAAAATGA # Right flank : GGCTAGATGGTTTATGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //