Array 1 791295-791526 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011524.1 Intestinimonas butyriciproducens strain SRB-521-5-I chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 791295 32 100.0 35 ................................ TGGTTCTGACCTTCTGATTTCCGCAGTAACTCAAA 791362 32 100.0 34 ................................ GTGGAGATCCTGGAGCTATGCCTGGAGGCTGCTG 791428 32 100.0 35 ................................ CGTCTGGAGGGAGACCGGGCCCTCTACGAGGCGGC 791495 31 81.2 0 ...................-T..T....C.CA | C [791499] ========== ====== ====== ====== ================================ =================================== ================== 4 32 95.3 35 GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Left flank : CGCGGGGATCTGGATGGGTATCCGCCGTTCCTGTGGAAGTGAGGATACTATGCTGGTGCTGATCACATATGACGTGAATACGGAGGATGCCGCCGGAAGAAGGCGGTTGCGGTGGGTAGCGAGACAATGTGTGAATTATGGGCAGCGGGTACAGAACTCCGTGTTTGAGTGCGTCCTGGACGCGGCCCAATACCGCCAGGTACAGGCAAAGCTGATACAGATTGCCGATCTGGAGCGGGACAGCCTGCGGTTTTATATGCTGGGCAACAACTACAAAAGCAAGGTGGAGCACTTTGAAATAAAACCGTCCTATGAGGCGGAGGGGGTACTTATGGTGTAGTGCGAGGACGGAGCGTGCAGCCAATTGCAGAGACGTTCGCACCTGCAAAAGTGCAGTGGAGAAAAGAAATTGCAAATGTATGGGCCGCACGAGGGAGAGAAAGTTGAAATTTGTGTGCAAGATCGCCAAAATAGATAGGGGAAGTTTGTGCGATTTTACT # Right flank : ACCAAAATGTGGTACGCTGGACAAGAAAAAATACCAGCAGTGAGGAGGAGCCCCAACGATGAGTTTTACCCTTCCTGTCTATCAGCCCCCTGATTTTGCCGCACTTGGTCTGGGGGACGCCCCCGATGTAAAGCTGGTCCCTGCGGAGCGGGACGGCGTGGTACCGGAGCAGTATCACGCCACCACCATGTTCCCCGAGTATTTCCGCCTGAACGGGCGGTGGGTGTTGGCCGAGGAGAGCCGCATGGACTGCGTGGCGGTATGCAGGGATGGGGCCGTCTCCATTGTGGAGTTCCGCAATGTGAAGAAGGGAGATCCGGTTGCCGTGGGCCGCACGGAGGATGGCGGTGAGGGAATTTATGTCCACACCGGCGGCTTTGGAGAGGAGGGCGGCGGTGGGGAGACCTTCTCCTTCCGGCAGGGACGCTCCAGGGAGACCGCTTACTCCATGGACTATGACTCCATTTACGAGCTTTTAAAGTATGAGCGCGACCATGGGA # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.50,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2953401-2951955 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011524.1 Intestinimonas butyriciproducens strain SRB-521-5-I chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2953400 33 100.0 33 ................................. AGCGCTGTTCGGCCTGTCTGACCGGAGCATCAC 2953334 33 100.0 36 ................................. TTGGAAATGAACCCCAAAGGACGGGTATAGTTGTCC 2953265 33 100.0 34 ................................. ACCCCGGAACTTCTCGATGCCCTCCCGGAAGGAC 2953198 33 100.0 34 ................................. ATCAGAAACCTCTGTGTCTTTTACAACATCGTCA 2953131 33 100.0 35 ................................. CAAAGGGTACAAGGACGCTTACATTACCTGCGACA 2953063 33 100.0 33 ................................. GCCGCTCGTCCGCGTCCAGGCGCTTGTCATTAC 2952997 33 100.0 36 ................................. TTTTGTCTGGAGGTGATAGCCCATGGCGCAAAAACC 2952928 33 100.0 34 ................................. ACAAGTGGCACAAAGTTGCTGGAGAAGTCGAAAA 2952861 33 100.0 35 ................................. GACCCAGGGCGCCGCCGCCATCCAGACCATGGTGT 2952793 33 100.0 33 ................................. GTCAGGGTGTGTAGAAAAGGAGAAAAAGCCTTG 2952727 33 100.0 35 ................................. GGCGAAAGCCTGTCCCTGCCCGCCGCTCATGGTCG 2952659 33 100.0 36 ................................. ATTTCCTACCTGACCGCCTATGCCATCTACCCCAGG 2952590 33 100.0 34 ................................. GGCCATCTCCAGAGCCGTTTTTTGGTTGTGATGC 2952523 33 100.0 35 ................................. ACGGTAGCGCTATCTCCGTTGACTAGGACGACCAC 2952455 33 100.0 33 ................................. CTATGGGGCGGCTACAACGCCGACGAGCTGCGG 2952389 33 100.0 34 ................................. TGGAGCAGGTATTGACCGAGCTGTGCCGGATCAT 2952322 33 100.0 35 ................................. GACCACTGAAACCGCCACCCTGAACTGTAGTGGAT 2952254 33 100.0 34 ................................. CATATGTCACCGCATCTGATGCTGGCAAGATTTT 2952187 33 100.0 34 ................................. AACGAGGTCGGCGCAGGAGATATTGCCGGTGTCC 2952120 33 100.0 34 ................................. CATGCCGTCAATGGATGCTTGCGACATTCCGTAA 2952053 33 100.0 33 ................................. AGTCCGGCATTCATGGCCGTGTTTCCCAGGCGG 2951987 33 81.8 0 ........................A..CTCC.C | ========== ====== ====== ====== ================================= ==================================== ================== 22 33 99.2 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTACCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAACGCGCAGAAAATCACCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGGAGAGGATATTTGTAAGAATTGTCTATTTTTCGCGCGAACAGCTTGAATTTTTAGCTGTTTTTGCT # Right flank : TTTATACAGTCGCTCACATATGGATAAAACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAAATGAATATCCAACAGGCCCAATGGTTTTTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATTGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCTCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCCTGGAGCCGCAAGGCTTAATAGTGATAAGGTACTATTTAGCTTTGCGAGGGGCAGAGAACGGTGTGACCGCAATGGTCACGCCGTTTTTCTGCGTCCAAGGGTAGATTTTGCAACAACAGGCTCGGAAATCACAGGAATCTCTACGTCATCCACGAAGTTGAAATAGATTTTTACCTTCTGTACCCGCTTGCCACTGGATTTGTCCGGCGCAAACACCTCAATCTTCTTGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //