Array 1 971011-967783 **** Predicted by CRISPRDetect 2.4 *** >NC_017954.1 Thermogladius calderae 1633, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================================= ================== 971010 24 100.0 41 ........................ GGCAGGTATGTTCCACCAGTCTGGCGGCTGGTACCTCCTCA 970945 24 100.0 43 ........................ AAGTTCACGGCTAAATAGCCCGGGTTTACAGCCTGCTCGACGT 970878 24 100.0 43 ........................ CTAATGCTGTGTGGAAGGCGGCGCACAAGCGCCTCGGCCCGAT 970811 24 100.0 43 ........................ GGCTAATAAGCTTGTGGGGGTGTGTTGCCTTGAAGGTCGTGGG 970744 24 100.0 40 ........................ ATAAGCTTTACGTGGTGTACACGGCGTCGAAGAAGACGGG 970680 24 100.0 41 ........................ CAGGGAATATTACCCGCGATGAAAAAAGTGTTTCTTCGGGG 970615 24 100.0 41 ........................ TTATAGTGTTCATTGGTCTTATCACGCTCTACGGCTTGGAA 970550 24 100.0 43 ........................ CAATTTTGAATATCCAAAGCTCCAAGACTCCTACCTCGTTGAC 970483 24 100.0 39 ........................ GACCGCGTGCCTGCCGCTTTCGAACTCGACATCCGCAAC 970420 24 100.0 39 ........................ TCTTGGCGTACACAGCTGTGGTGGCGCCCACGCGCGCGA 970357 24 100.0 42 ........................ GTTAGATGGAATGAGGCTTGGATCAGTGATGTTAAAATACTT 970291 24 100.0 46 ........................ TGGTGACGCAGTATCTCTGCCGCCTCCTCTCGCGTGGCCAGGTTCT 970221 24 100.0 46 ........................ CGCCGCCAGCATATTTCAGCCCCGCCTCGTACGCTTCGAGGCACCA 970151 24 100.0 41 ........................ CCTAGCCGCCGAGTCGGAGTTAGTTATCCGCATGGTGAGCT 970086 24 100.0 46 ........................ GCAAGTCTTTAACACCTCGCACTCCGATTTAACTATTTCCGTCGCC 970016 24 100.0 42 ........................ AAACAAAGATACGTGTACCGCCCGAAAAGTGGCGTACATTAA 969950 24 100.0 47 ........................ TGTCAGCTCCAGTATCGAGTCGGCGTATTTGTCCACGTCTATCCCGG 969879 24 100.0 46 ........................ TTTACCGCTTAGCATAAAGCCCATGTATAGCTCCAGCTTTTTGGCT 969809 24 100.0 42 ........................ CGCGAAAATTAAAACTGTCGTGAACCAGCTTCACGAGTACAG 969743 24 100.0 44 ........................ GTATGGGAATACAATTCTGCGTCCATTGATTACAGCCTCACCAT 969675 24 100.0 42 ........................ CGGTTCTCGACGAGGAGATATTAGCAGAGCTCGAGGAGTCGA 969609 24 100.0 42 ........................ GTATCGGGCCGAGCCTCTTGTGCGCCGCCTTCCACACAGCAT 969543 24 100.0 39 ........................ GACGTTTATCTCGATGCCTTGGCGCGTCAGCACCCAGGC 969480 24 100.0 42 ........................ TAGTCTCGCAGAATCGGGTCGAGCCAGCTCGGCTTCTCTATC 969414 24 100.0 41 ........................ CAATCTATGTTAGGACTCCCACCTATGAAAAACTGAAAGAA 969349 24 100.0 39 ........................ TTTTTCCCTCTAACACATAACTTCTCACGGTGATAGGGT 969286 24 100.0 41 ........................ GATCGTGGTACCACCACAGAACATCACGATACACTTCTAGT 969221 24 100.0 55 ........................ CGCGGAAGTACTTCAGGGTGGAGGAGGACTGGAGCGGGTACAACAGGTGGAATTA 969142 24 100.0 44 ........................ ATTATATACAGTTAATGCGGGCTAATTAACCTAACGCATCTCAA 969074 24 100.0 46 ........................ TCGGCGGTATCTTCGACGCGATACGAAACGCGTTCTCGCCGATATT 969004 24 100.0 40 ........................ TTTTTTTCCCGCGCCCCATTCGCCCTTCTTCGACACCCGT 968940 24 100.0 46 ........................ ATCGGAGTGCATCAAGGGTGTGGACGAGGACAAGATAGTCTTCAAT 968870 24 100.0 43 ........................ AGGACTACGAGGACGACGACTACGAGGACGACCCCTAGGTGAG 968803 24 100.0 43 ........................ ATCTCCTGCTTCTTGAGCAGGGCGTCAGCCTCTGCCAGGAGGT 968736 24 100.0 42 ........................ CCCAGACCACGTGAGCCACGTACCTCTTCTTGACGCCAGTGA 968670 24 100.0 41 ........................ TTTCTATGTATTCCTTGGGTATGTGCGGACATACATTTTCT 968605 24 100.0 43 ........................ ACGAGTATTCTCGTCTCGAGGTTCACGCCCTACCTCTCTGCCA 968538 24 100.0 41 ........................ GGCATGTTTACGTACACGTTGAGAACTGCGAGGGACTACTA 968473 24 100.0 41 ........................ AGGGATCAACTCGCCCTTATTGTATTTGTTGATCAACTCAT 968408 24 100.0 41 ........................ GTAAATGTCTTTTAGAAGGTCCTCCACGCGCCTCCAGGAAA 968343 24 100.0 37 ........................ GTACGCATCTAGGATGTCCCTCCTCCGCGTCACAGCC 968282 24 100.0 46 ........................ TAATCAGATATCTCCTGACGGAGTACTACAACCAACTCGTGAACAA 968212 24 100.0 46 ........................ GGATCAGCTCGTTGAGGGCGTCCAGCACCTTCTTCTGCTCCTCGGT 968142 24 100.0 40 ........................ CTTGAGCGAGTACGCTACACTGGATGCGTGCCTGCAGAAG 968078 24 100.0 45 ........................ TACATATGTCGTACTTCTTGTGGTAGTCACAGTACGCCCACACGA 968009 24 95.8 47 ..........G............. ATTATTACGAGTATTAGTGAGGCGATGATTGCTGTGATCTCTTTCCT 967938 24 95.8 41 .........G.............. GATCCGTCGCACATAAACGTGTACAATCTCGATCCTAACGT 967873 24 91.7 43 ........GG.............. CTTTCAACTCATACGCGGTGAACGCCGTCGCTAGTGCTACTGT 967806 24 95.8 0 .........G.............. | ========== ====== ====== ====== ======================== ======================================================= ================== 49 24 99.6 43 GAAGCAATCAAGAAGAATTGAAAG # Left flank : CAGGTAGGCCCTGGGCTTCACCGGCGGCCTGTCCCAGCTCCACCCCCTCAGCTCCTCCTCCACGGGGTCCGCCCTGGACCACGCGTAGAGCCTGCGGACGCTCCTCAGGACGAGCCTCCTAGCGAACAACCCCGGCACCCGGGGGAGGCTCTGGGAGGGCAGGGATTTAAAACAGGCGGTCAAACGCCAGGGGGGAAATCCCACGTGCTACATGGGACGGGCAGCCGCCGGGGAGCCCGCGCCGCGGGGGCGGAAAACGGGAACACGCCGAGGACCGATCACACGTGTAAAGAGGGGACATTACACCAGCCAGCAGGCGCGACGGGGAGCAGGCGCAGGCGGCGATCGTCCCAGGAGGGACATGGGACGCACAGCCTCCGGACGAGAGGGGGCTGGGGCGATCAGGCCCCGAAGAGGCCCCTGGGGCAGACAAAAACCAGGGGGCGTAAAGGCTTAAATAGCCGATCTAGTTTAAACAAACAATTAAGGAGCGAAGCTCA # Right flank : CACCGTGGAGGCCGGGCGTTGCGTGGACTACGCTAAAAATTCCCTGTTGCAATAGAGTTTAGCCGCTGGTCTCCATGTCGGCTGTAGAGTCGAAGCTGGCGCTCTTCAAGGTGGCCGCCTACCTCGACGGGTTCAGGGGCTTCGTTTACACGGGCAAGCTGTCGAAGACCCTTGTCATCACGGCGGTGCCGGAGCTCGCGCCGCACTTCCAGCCCTCCTCGGGCTCTCCCCCCAAGCTGGTCCACGTCTCCCCCCTCTACAGGGAGTCCGGCGGCAGGGTCGAGGCCGTCTACACCAGGCTCTCGTGTAAGGGGGGTCAACTGGCGAGGTGCGACGACGGGGTCCCGAGGCCCGTCTTCCTCGAGGGCTTGTACACCTTCTACCTGGGCCTCTCGACCAGCCTGGTGGACCCCGGCAGAGTGCTATCGGGGCTGACGAGCCTGGAAGGGTATTTGGAGTTCATGAAGCAGAAGGTCAGGGTCTCGGTGAGGCAGGTCGAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCAATCAAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 975000-976610 **** Predicted by CRISPRDetect 2.4 *** >NC_017954.1 Thermogladius calderae 1633, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 975000 24 100.0 44 ........................ CGGACACCACAGCTGTGGCACCACAGGCTACGGCACAGGCTCCG 975068 24 100.0 43 ........................ ACGATCGAGGAGGTCACGATACGAGACCCGGTAACTAAGCAGC 975135 24 100.0 43 ........................ GAACTCGATCATTGCGACCTGGCCTCAGTGCTTGCGCTTCTTC 975202 24 100.0 45 ........................ GCATAGCCGAGCTCGCCGAGACCAGGCTGAAGGGGGGTGCGGGCA 975271 24 100.0 45 ........................ CGAGCATCTGCTTGAAAGCCGTGAACAATCCGAGCTCGGGGTATG 975340 24 100.0 40 ........................ AGCACTTGACTCGCTCTAGAGAAGTCGTAGCCATACTCAT 975404 24 100.0 40 ........................ TACAAGGTGATGGAAGAGGCCGCGTACACCACTCCGAGCC 975468 24 100.0 43 ........................ TTAGTACTGGTTTACCATCGGTTGTTGTAAAGTACTCTACTTT 975535 24 100.0 41 ........................ CATTTTTACCCTTCGCCCCTACGGTAAAGAATAGCCGTGGA 975600 24 100.0 43 ........................ TTACTAACTGCTTGAACAGCTTTCCGCGTTCATTGAGTAGTAG 975667 24 100.0 39 ........................ CCTTAGAGCTCTTGAAGGGGATGACAATCCTGTCGTCCT 975730 24 100.0 41 ........................ GTTTAGCGTCGTGTCGAAGATTTCGTATTCGTCGAAGATTC 975795 24 100.0 40 ........................ ACTTGAGAGTAGCCTCGTGAGTTTAGCATAAACATACTCA 975859 24 100.0 41 ........................ CGGGGACGGAGAGCAGCTCGTCTTCGACGAAGTGTACGAGC 975924 24 100.0 43 ........................ ACTCCATGATACAAAAACGCCCTTTCAAATTTCCCTCCTTTAG 975991 24 100.0 42 ........................ GGCGACTACTACGACTACGAGTGGAAAATCTTCAACGAATAT 976057 24 100.0 50 ........................ TCAGCTAACCCATCACTCACTATTGGAAACACAACATACACCATCCCAGT 976131 24 100.0 44 ........................ ACTACCGCATATTGACCAGCCTGACCCAACCAGAGGTTAAACAG 976199 24 100.0 40 ........................ TTTTACCCCAGTCAAACAGGACATCTATAATGTGATACTT 976263 24 100.0 41 ........................ TTTATGGTGTGGACCGCGTACACGTACCCGCGTTTCACAGT 976328 24 100.0 38 ........................ GTACTTTTTCCCAGTCTTCAAGACCCACGGATCCTTAA 976390 24 100.0 43 ........................ TTTTTTAAATATAAGTTGCATACCCTTCTCCTAGGTGATGAGG 976457 24 100.0 41 ........................ AGACAGATAATCATTCCACCCCAGAACATCACGGTGCACTT 976522 24 100.0 41 ........................ TTCCACGGGAGTCGCCTTTTATTCTTATTTATAAATATTTA 976587 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================== ================== 25 24 100.0 42 GAAGCAATCAAGAAGAATTGAAAG # Left flank : AACGCCCTCCTAGACCCGGGCGCCAGCGGGCTGCAGGTGACCGCCACCAGCCTGTCCCCGGGCGAGGCCCTGTAGTGCACCAGCATCCTGAGGACGGAGTCCTCGTGAAAGCCGAGAGGGGCTATGAAGACCCTCAACAAGGCACCCAGATCAACTAAAAGGGGGCCGGGGATAAAAGCTCTCCCGCGCAGGCAAAATCCCACGCAAGCCGTGGGATGAACAGCCGCCGAGGAGCCACAGCCGCGGGAGCCGGGCACGTCCAGGGCGGCGAGGGGTGATCACACGTGTAAAGAAGAGACATTACACCGGGCATAAAACGAGACAGGAGGCGGGAACCAGAAGAGGCCGTCCCATGAGAGCCATGGGAGACACAGCCCTTCAACAAGAGGAGGCAGGGGCGATCAGGCCCCGCAGAAGCCGCCGAGGCTGGCAAAAACCTTGGAGCGTAAAGGCTTAAATAGCCGATCTAGTTTAAACAACCAATTAAGGAGCGAAGCTCA # Right flank : GTGAATGGAAACCCGAGAGATGGGGTTAGGCGATTTACAGCGGCCAGCACCCAAAAGTAGTTATTTTTATCCAATATTCAATTTTTATAATCTTAAAAACACAGCAAATAAACACGGCTATTTGTTGTTAATGCTGGGACGTCCAAACCTGATGAGACCCACCGTACTGTGGCAGCACGGTGTTGGCCTTACTCATTATCAAACCCTATTGTTGGAGGACCGAGATCACGCCTTGGCTTACTTTTTGTTATATAGGGAAGTCACAAATTATAAGTAAAGATGCAGAACCAACGCTCAGCGTCAACACCAATCCTATTCTCAGCTCTCTTTCCCCCAACCTCAGTTAAGCGATCATGAAGGATTAAGAGGCCCGTTCTACTTTGCGAAGGGTGTTTTGAACCGCTGTTTACCTTGTGTTGTGCCGCTGAGGCGTGCACGGGGGTGGGTGAGGGGGTGTTCAGCGGTGCGGGGCCCGGCCTCATCCCCCGCCGCTGTGGGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCAATCAAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //