Array 1 111-261 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WOSX01000016.1 Acetobacter fallax strain LMG 1636 contig00016, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
       111	    29	 100.0	    32	.............................	CCCGAGGGTCGGCCGTCCCACCATGCGTTTGG	
       172	    29	 100.0	    32	.............................	GCTGTTGGTGATGCCCGTAGCGTCAATATAGA	
       233	    29	  93.1	     0	.........................A..T	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	  97.7	    32	GTGTTCCCCGCCTGCGCGGGGATGAGCCG	                                	       

# Left flank :   ACGCAGTCAGTTCAACCATCGGCGAACTCCTGCGCAGCTACACTCCCAGCGAATGCGCCAACTACTTCACCAACTCAGGATATGGACCAACATAAAATCATCACGCTCTAG
# Right flank :  TGTGATCTTGCGGCAGGATGTCGGAATGAAGCAGCCTGCTTTCTGAGCATTGGTGCGTCATTCCGTCGTCATTGGGGGGTGCAGGCTGTTTTTAGGGTGGGGATATCAAGAACTTCCAGTTCTCTGCTTCATCACCTGTAGCACACCAGTCTTTTCAACGAGACAGCAATCACAAATCGAAACGACTGACCATTATAAAGACGATGAGCACATGGTCCCAACGGATCCATGATCCCGCCCTATCGGGTGCACCCGTGGCGACCTGTCCGCCTGCATCTGACGGCAGGCCAGGTCAGCGATGACAAGGGAGCCGAAGTGGCTTCCTGCTGATCTGCCCGGGGAGACCACCGAACTCATCGGCGACTGCGGATATAACAGCAACAGGATCCGGAACTCCCTTGCTGATCAGGGTGTCGAACCCTGTATCCCCCTCCTCGCAAAACAGAAAAGCCTCAGTCACAGGCGCCAGAAACAGCCTGACCATAACGGATACTTCGCCC

# Questionable array : NO	 Score: 5.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCCTGCGCGGGGATGAGCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCCTGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//


Array 1 292-141 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WOSX01000005.1 Acetobacter fallax strain LMG 1636 contig00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
       291	    29	 100.0	    32	.............................	ATTTCCCACTGTTCATTCGCCCGGACGCACGA	
       230	    29	 100.0	    32	.............................	GCGTGGAATCTGCCAGCCATTCGTCATGCCAA	
       169	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	 100.0	    32	GTGTTCCCCGCCTGCGCGGGGATGAGCCG	                                	       

# Left flank :   CGCTCATCGACCTATCCACCGTCCCGCTCCCCAACACCCAATATCCAGCATCAGACAATCATTAATAGCGCCCGGCGCCCATGGGCAGGTCTTATGATCCGCCATGCCAGTCGCTCGCTGTCTGGCTTCCCTGTGACCGCCTTTCTGGCCACGCAATCCGACAGCGGGCCTTCCACTGCCCCGCCCTGACGCGACAGCGAGCCAAATTTCGTTTCTAACGTCAGATGAGCATCAGAAAAACTTACAAACTACAGATGCATTTGACTTCTGACTTTTTGTGCCGCTGTCTTTTGAAAACGACAAAATCGCCACAAGTCCGGCATGTCCCGGTTTCGTTAACCTGGTACCTGCACTCAGATGGATATTCTGTGTTAATGACCTGATAATAAAAAACCCTTCTACCTGCTGACGGAGTCACGCAATGCAGTGGGCTGACTGGCCCGGTAAAAGCCCGATAATTTCCGGGGGCATGGAACATCCGGCTGCTTTCCACATGCTTG
# Right flank :  GTAGTGACATGATTCGGGCATTGGCGGATGTTAGAGCCTGATGATTTTGGGCTGAATCGGAATATGGGTACCCAGATTGGCTGAAATCTGATTCAACCATCTGGCTGGATTGGAGGCCAGCATGGATGGCGCGTCCTTATT

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCCTGCGCGGGGATGAGCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCCTGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-15.00,-13.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.15,4.5   Confidence: MEDIUM] 

# Array family : I-E [Matched known repeat from this family],   
//