Array 1 87699-84103 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMFN01000001.1 Flavobacterium sandaracinum strain LB-D12 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 87698 36 100.0 30 .................................... CTGTTTGTGTTTTCTTTACAAGTATTCTCA 87632 36 100.0 30 .................................... TTTTCGGTAGTACTCACACTTTGATCTACT 87566 36 100.0 30 .................................... AGTAGCGCCTGCTTTTAGATCAGGAAACAA 87500 36 100.0 30 .................................... TTCCTAAAGGTTCTACAATTAGCGTTACCT 87434 36 100.0 30 .................................... GGTGCTATTGTCTATGTAAAAAGGACCAAG 87368 36 100.0 30 .................................... ATAGAAAATACGATAGATCAACTATTTATG 87302 36 100.0 30 .................................... TCATGCAATATCATAATATACTGCATGATG 87236 36 100.0 30 .................................... TGGAACATCAAAAATTAACCAAAGACATTG 87170 36 100.0 30 .................................... AAAAAACTCGATGTGCAAAAGAAAGGGATT 87104 36 100.0 30 .................................... GCAATGATGTAAATAATGGATTTAACATGT 87038 36 100.0 30 .................................... ACTTGCTAAATTCGCCTTTAAATCTAGTTG 86972 36 100.0 30 .................................... AATTTCACTTTTTCGCATTGCAATTAATAT 86906 36 100.0 29 .................................... CTTTGGTTTACCCACATTTATCCCCTTAA 86841 36 100.0 30 .................................... TGGCTTTGGCTTTTTGTGTTTTTATTTTAG 86775 36 100.0 29 .................................... GGTATAAACTACGGTAATAGAATAAATAA 86710 36 100.0 30 .................................... TTTTCGGTAGTACTTACACTTTGATCTACA 86644 36 100.0 30 .................................... ATTACTGGTTTGAATACTTGCATCTCAGCA 86578 36 100.0 29 .................................... TGATTGTTCTACAGAATATAATTCAGATG 86513 36 100.0 30 .................................... CTCAAGGATTAACATATAAAGTTGGCTGTA 86447 36 100.0 30 .................................... ATTGATACTCTAATGCCCTTGGCGTAGAAT 86381 36 100.0 30 .................................... TTTTCGGTAGTACTCACACTTTGATCTACT 86315 36 100.0 30 .................................... AGTGGCCGTATCAATATAGATCGTGTTCCA 86249 36 100.0 30 .................................... ACGGTCATCCAAGAAGTGCGCAAAGGTGCT 86183 36 100.0 30 .................................... GGTCTGCTGCTATTCAAAATGTAATAGCAG 86117 36 100.0 30 .................................... ATTTGGATAGTTGGTGACGGTTACGGAGGT 86051 36 100.0 30 .................................... GCAAGCCAAATCTAATTTTAATTGGTCAAG 85985 36 100.0 30 .................................... TCAATTACAATTCCAGTTGAGTTATTAACT 85919 36 100.0 30 .................................... AATTGAGAATTTAACTAAGGACGCTTTAAA 85853 36 100.0 30 .................................... CGTAGCATTAGACAACACGGCAATAGTCAC 85787 36 100.0 30 .................................... TTAAATTGCTCTAACCATTCAATAAGCATA 85721 36 100.0 30 .................................... CTTTAGATACAATTGAACCATTATAAAATA 85655 36 100.0 30 .................................... AATGGAGTGTTAACGCCCGTTCCAAATAAT 85589 36 100.0 30 .................................... GTTCATTATTGTAGCAGTTAAGGAAAAGTA 85523 36 100.0 30 .................................... ATAAATAAATAATTTGTATATCAAATTTAA 85457 36 100.0 30 .................................... ACGTTACCTTATAATAATAAACAAATATAG 85391 36 100.0 30 .................................... AAAACTTTCAAATAAACGAAGGTGCATTAA 85325 36 100.0 30 .................................... CTTTTTAAAGAACTTTACCTCAAAGAAACC 85259 36 100.0 30 .................................... GTTGTATGCATTATTGGACCACTTTCGCTG 85193 36 100.0 30 .................................... GGGCAAGGTGGTGTTTATTGCCCTACAACT 85127 36 100.0 30 .................................... AATCCCATTCACGAGCGAAGCGTCTCCGTA 85061 36 100.0 30 .................................... CACGTTTGTTTTTTAAATTAGCACGTTGTG 84995 36 100.0 30 .................................... AAACGATACTAAATTGAAGTGTAAAAGATA 84929 36 100.0 30 .................................... CTGTTACAGGTACAGGTACTGTTAATAGAA 84863 36 100.0 30 .................................... GTAGTAAGTTCACGTTTGGTAGTTCGCAAG 84797 36 100.0 30 .................................... CCCCAAATTTGTTAACCATGTTTACAAATG 84731 36 100.0 30 .................................... ACGTTTTTCAAAGCATTTTGAGCGATTGCT 84665 36 100.0 30 .................................... TATGCTTTGGAGTTATAATGTTTCTAAAAT 84599 36 100.0 29 .................................... TTAATACCGCATTTAGTGATGTCAAAAAT 84534 36 100.0 30 .................................... TATCCAGTTCCCTTTGATCGTCCTCACTTG 84468 36 100.0 30 .................................... AAGATCACGTTCGCACAGATGGAACTTGTG 84402 36 100.0 30 .................................... ACAGAACCACGGTAGATAAGATCAACTCAG 84336 36 100.0 30 .................................... CCAACTAAATTATTAACCAATTCGTTAATA 84270 36 100.0 30 .................................... GAATATGTATTTAATGACGATGCTCCGGCA 84204 36 100.0 30 .................................... TTTTATTCCCGACATCCTTCGTCTTGAATA 84138 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 55 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TGTTACATCATTCAGAAGCAAGAGATAAGAAACGAATAACCGAATTTATGGGCTTAAAGACAGGTATGAAAGGTGGAAAAAATGTTGGAGAACATAAAAAATATCCATGGATTAAAATTGGTGCAAATTCATTTGATTGTTTAGTGGAAGACTATGAATTCAAATTAACTCCTACTGGAAAAATAAAATTTTTAAAATAATTTAGTGGTTTGTCATTCCGCCGAGGGAGGAATCAAATAACGATAGGAATTTGGTTCTTTTTCAAGAAACCAAAATAAAACAATATGTTGAATTTACTGGTAAAATGGAAAATTATGTAGTGGTTTGTCATTCCGACGAATAAGGAATCACATAACGAGAGCAACTGATGTGATCCCTCCTCTGGTCGGAATGAAAAAAAAAATAAAAGTTCTTTGACATACAGTTTTTCAACGTCTTAAGCATCTCAAACCACAACTGAAAGTTATGGCGTCCGCCCAGCAGGGACGCGAGAACTTTCA # Right flank : AGTTGGCTTGTTATCTTCTGATTTTCATAGTATTAAAAGTAAATATCGTATAAAAAAATGCCTCTTTATTGGTTTGATAACCCAATATTGAGGCATTTTTTTGTTTGTAGCGACCGCCCCACCCTTTATGCATTCCTCCAGAGGAGGGGAAATTTAGAACAGTTCGAGTTGTGTGGGTTGCGGTGCTTTTGGGACTTCAGCTTTGCCCCAAAAGTTTAAAATATTTCCAAATTGCTTATCCGTAATTCGTAAAACACTCACTTTTCCTAAAGGTGGTAAGAGTCGGTGTATGCGTTTTTCATGTACATCAGCACTTTCACTGCTCGCACAATGGCGCACATAAACAGAATATTGCATCATGCTAAAACCATCTTTCAAGAGATTACCTCGAAATTGTGAGGCATTTCTTTTATCTTTTTTGGTTTCTGTCGGTAGATCAAAAAATACGAACAACCACATTATTCGATATCCGTTAAGTTCCATAATTTAGGATATTTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 41401-37943 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMFN01000009.1 Flavobacterium sandaracinum strain LB-D12 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 41400 46 97.8 30 A............................................. TTTTACAAAATTATCCGAACTATCAAAAAC 41324 46 100.0 30 .............................................. TTCTATAAAAATAACGGTAAATGCTCAACT 41248 46 100.0 30 .............................................. AAGCAAGCATTGAAGGAACAACCCGAACAG 41172 46 100.0 30 .............................................. TATTCTTTTTTTTAATGAAACATCTAATCC 41096 46 100.0 29 .............................................. ATTACTTCTTTCAGTTACGATGTACGGAC 41021 46 100.0 30 .............................................. TTTTACTGTTTTTTGTGCTTCTACTGTATC 40945 46 100.0 30 .............................................. TCTCATTGATTTCAATAGCAGGTAGTCCTT 40869 46 100.0 30 .............................................. AGCCGTCAGTTGAGCCTGTTGTTGTTGGGA 40793 46 100.0 29 .............................................. AAAACTGAATTTACTTTGTCAATCGGAAC 40718 46 100.0 29 .............................................. AGGAACACAAGTATTAAGAAGATTCAATG 40643 46 100.0 30 .............................................. AGTACTCCATCGAGTGCAACGGCTTAGGTA 40567 46 100.0 30 .............................................. TCGCTTAATGCGAAAGTTTACTGACGTAAA 40491 46 100.0 30 .............................................. TTACAGCAATAAGAAAAGTATTTTCCCCTT 40415 46 100.0 30 .............................................. TAAAACCCATGAAAAGACTAAATTATTTCC 40339 46 100.0 30 .............................................. TCGTTTTCTAACAGCGTCTTTTCCCGCTTC 40263 46 100.0 30 .............................................. GATCGCCGGTCAGGGGTGGTGGCGGCGTAA 40187 46 100.0 30 .............................................. TATCTATCTTCATATCTTCATATCTTCATA 40111 46 100.0 30 .............................................. AAAATATTTAAACATTGAATTGAAAGGTGA 40035 46 100.0 30 .............................................. CAAAAACGCTTTTTCTTGTCGTTCAACTGA 39959 46 100.0 30 .............................................. TTACACGTTTTAATATAAGTGTATGTGTTT 39883 46 100.0 30 .............................................. TAGCAACGGCCAAACCGTTTGCATCGGTTA 39807 46 100.0 30 .............................................. AATAGATCAATAGTTTTGGAAGGAGCAAGC 39731 46 100.0 30 .............................................. GGCGGATGCTGCAGCCAATGCGGTTTCAAC 39655 46 100.0 30 .............................................. TTATCAGATGAAGCGCCATTCGATCATTTA 39579 46 100.0 30 .............................................. ATATAAACTTTGACCCCATTGTATACGAGT 39503 46 100.0 30 .............................................. GAAAGTCGCCGCTAAAATAGCATCATAGCG 39427 46 100.0 29 .............................................. GGGTGAGGCTGCGAACCTCTTAACAGTAA 39352 46 100.0 30 .............................................. TTAAAAAGTCTTCATCCATACAACCTATTC 39276 46 100.0 30 .............................................. GAAAAATTTAGATTTCAAAGGAACTGTACA 39200 46 100.0 30 .............................................. CAGCATTTTCAAAATTAGCAGTAATCGTTA 39124 46 100.0 30 .............................................. AGAATGAATTGTATGTCGATAATCAGTTTC 39048 46 100.0 29 .............................................. AGTGCACCCTGTTAAGTTTCTTAACACGG 38973 46 100.0 29 .............................................. TTTTGCATAGGTACCAATTGCAATCAAAG 38898 46 100.0 30 .............................................. GTCGTTCGTCAACACCGTAGCCACGTCAGC 38822 46 100.0 30 .............................................. GGTTGACACAAAACAGTATGCTCGAAAAGA 38746 46 100.0 30 .............................................. CGTGACCGAAGAAACAGTTTTGGAAGCCGT 38670 46 100.0 29 .............................................. CAAGTTGCAGCAGAACCATCCGTTGCAGT 38595 46 100.0 30 .............................................. GCGGGATTTCCGTCATGTTTTATTTTTCCG 38519 46 100.0 29 .............................................. TAGTTCCTTTAAAAGCTTTCAAGTTGATT 38444 46 100.0 30 .............................................. AACCTTCATTGAAGCGTGTTGATCTTCATG 38368 46 100.0 30 .............................................. TTGGAAAATATCACTTGTACAACCAGCATA 38292 46 100.0 30 .............................................. GCTCTACTTGTGCTGGCTCTAAAGTTCGCC 38216 46 100.0 30 .............................................. TTGTCCCAGTTGATAAAATCAGTTGAAACA 38140 46 100.0 30 .............................................. GGTCTATTTATAAAAAAAACTATTGGGACC 38064 46 100.0 30 .............................................. ATTAAGATTCAATCCATAAGCAAACTGATT 37988 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 46 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Left flank : AGTTTTGATGCTTCTTGAATGTTTAGAATTTAGTCCATATTTTCCTGTACAATAGAGAATCCTATAATAAGTTTTTCCCAATGCTCCAATTTATCATGAATTTTGTTCATCATTATAGGTATTTGATCAAAAGTAAATTGCTTCATGGTGATTGTTTATTTAAATTTTATATAAAAGTATTTAATACCAACATTGGAGATAAAAGATGTCCTTAAAAGGGGAAGTTTGGCTTTTAATTTCTAATGGTTGCCGTTTATAAGACTATAAGAATCCATTATGGAGAAATGTTGGCTAGAACTGCCGGTCTAGCTGCCCTGTCCAAACAGAAAATCCCAAGAGAAAAAAATCATAGATCTAGAAAGGACCGATTTTGAATCCCTAAATGCAATGAAACGGGAGCAAGATACAGAAGACTAAAATATTTTAGTGTGCAAGTGATTTTCTAATTGGATAATTGGTAATTAGGAAGAGTGTAAAAAATCAAAGGGAGTACTGAGGCA # Right flank : ATACCTCGACCTAATCGTTTGATATGTTGGCAGTTATGGGTTTGTTTTGAAATTAAAAAAAAGAAGTGTTTATATGTTGTTGTACAGTGAGTTATACTTTTTTCTAATCCTGTTAGATTAAAACAACTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACCAATTTTTTTCCATAAAAAAGCTCCATCATCCCAAATTGTTTATCGGTTATTTGCATGACGCCAATTTTGCCGTGTTCGGGTAAGTTATTTTTTATTCTTTTAGTGTGTACTTCCGCATTTTCCCTGCTGGCACAAAATCGCATATAGATCGAAAATTGAAACATAGAAAAGCCGTCGTCTAATAATTTCTTACGAAATGTACTGGCTATTTTGCGCTCTTTGCGCGTTTCCGTAGGAAGATCAAAAAATACTAATATCCACAAACTTCTATATTGATTTAAACGGGTGTAATGTTCATCATACATAAACGGGGTATAAAATTTTCCTTGCCGTTCCCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //