Array 1 1871140-1873081 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058278.1 Flavobacterium inviolabile strain P2-65 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1871140 35 83.3 30 A....A.A.G..-C...................... TACAGCATAGTACAGTATGTCAAATTTGTT A [1871144] 1871206 36 97.2 29 ........................G........... ATGCTAGGTTAACCCACAACAAAATTCAT 1871271 36 97.2 30 ..........................G......... GCTTTCAGTAACTTCATTATAATTGATGTG 1871337 36 100.0 30 .................................... CTTAAAACTAAATGGTGACCTACAGCTTAT 1871403 36 100.0 30 .................................... AATCGTAGAGAATGGGATATCAACTACGGC 1871469 36 100.0 30 .................................... GCCGAGATTTCAACACGACTATAATGATTA 1871535 36 100.0 29 .................................... GTTGAACATCTTTTTTAACATCGACTATA 1871600 36 100.0 30 .................................... CTTATTAAACAAGTATATATGGTCATACAA 1871666 36 100.0 29 .................................... GCGCTAATACAACTATATCTAATTCACAT 1871731 36 100.0 30 .................................... GTATAATAATTAACAGTTCATTACATCATG 1871797 36 100.0 29 .................................... AATTGAAATGGTAATTAAAGATGTTTTAG 1871862 36 100.0 30 .................................... AACGCTGCTTTCATTTTGCCAAAAATCTTT 1871928 36 100.0 29 .................................... ATCTTTATTACTAAAGATCACGGACACGG 1871993 36 100.0 30 .................................... AGAAGCAGCCAGCAAAGTGCAAGGAATTGC 1872059 36 100.0 30 .................................... AGATGGTTCGTTAACATATATCTTAAAATA 1872125 36 100.0 30 .................................... CCTCGAAACACAATATGACTATAAGATAAG 1872191 36 100.0 30 .................................... AGATGGTTCGTTAACATATATTCTGAAGTA 1872257 36 100.0 30 .................................... CAGGTCAGACGTTACCAGACCCTGAATTAT 1872323 36 100.0 30 .................................... TCAACCTTTCGTGCAGAAAATGCGTGAAAT 1872389 36 100.0 30 .................................... CAGTAGTGTTGGATTGTATATATTCAAGGG 1872455 36 100.0 30 .................................... CATAGGAAGTAAAATACTAGGTAACGACAT 1872521 36 100.0 30 .................................... ACTAGCATACTTCGATGCGTATAAAAACTA 1872587 36 100.0 30 .................................... CAGGGGACGGAAAGATAAAAACAGTACGAA 1872653 36 100.0 30 .................................... TAGCACAAGCTACAGAAACAACAAGTGTGA 1872719 36 100.0 30 .................................... CACCATTATATAATGGTGTGACGGTTAGTA 1872785 36 100.0 29 .................................... CGAACGAGCAAAAAAAGCTAAAAAAGAAG 1872850 36 100.0 29 .................................... TGGTATATCACCAGTAGCATTCTCGGAAG 1872915 36 100.0 29 .................................... TTGCCACTCTAAACCTAGACGCTCGAATA 1872980 36 100.0 30 .................................... CGGAATGCCACTGACAGCAAAAATGCTGGA 1873046 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.3 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATTATCCTTTATATAAAGAAAAAGAAATAAAAGGAAAAAAAGTACAAATTCCGGTTGCTAAAAGTAATAACAGAGATGTTATTTTGAAAAAAGGGCAACAAGTTGTTTTTTATGACAAAGAAGTGGAAAATCCCAAAGACATTACAGAAATAATTGATTTTAAAGATAGAGCCTATATTATTGAAGGATTGTCGATTAATAGAGTTAAATCCGGTAATAACTTTTACGAGTTTGGAGTTATTCAACTGAAATACTTTAAAGAAGCAAGAAAAGCTGATGATATAAAAAAAGATAATTTTAAACCAGATGGAGATTTTAAATTAACAGAATATAAACCAACAAGAAAAATGAGTCCGGGTCAATTTACAGCTTTTGTTGAAGGAATTGATTTTAAAGTTTTAACATCTGGTAAGTATAAGAAAATATGATTTTTTAGATTGTTTAATATAGGTTTTTATGATTTTAAAATATCAAAATGATAATGAAAACTCATCCATTG # Right flank : TAGTTGCGTTTTTAGCTTCTGATTATTAAGTGTTTAAAAGTAAATATCGTGATAAAAAATGCTTCTTTTTTAGAGTGATAAGCTAAGCTTGAAGCATTTTTTTATTTCTAAGGTTAAAACAATTCCAGTTGTGTGGGTTGCGGCGCTTTGGGGACTTCTGCTTTACCCCAGAAATTAATGATATTTCCAAACTGTTTGTCGGTGATCCTTAAAACACTCACTTTTCCTAAAGGCGGCAGCAGCTTATAAATCCGTTTTTCATGAACATCAGCACTTTCACTACTTGCACAATGCCGTATGTAAACAGAATACTGCATCATCGAAAAACCGTCCTTTAACAGGCTGTTTCGAAAACCGGAAGCATTTTTCCGGTCTTTTCTGGTATCAGTTGGTAAATCAAAAAATACAAACAGCCACATTACTCGGTATCCGTTAAGTTCCATAACGAAGGATATTTGATCTTTTTGCGGCTTCCTGTAAAACATTGCTGCAGTGAACTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 2070215-2070844 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058278.1 Flavobacterium inviolabile strain P2-65 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2070215 36 100.0 30 .................................... TACTCTACATGGTCTTTGTCTGTCTTTATC 2070281 36 100.0 30 .................................... TGCTTCGATAATTTTAGTTGTTATTAATTT 2070347 36 100.0 30 .................................... TGAAAGCGCATGATAATTTACAGCCGGTTC 2070413 36 100.0 30 .................................... AATGATTATTAATCTTAAAACTATCAAAAT 2070479 36 100.0 30 .................................... AATGATTATTAATCTTAAAACTATCAAAAT 2070545 36 100.0 30 .................................... CTGTCAATTGCTGTTGCAATGAGGCATTTT 2070611 36 100.0 30 .................................... CTTCATGTGATTTATTTACGAGTTTTAAAG 2070677 36 100.0 30 .................................... GTTGCAGCTGTGTTAGCTGTAATTGCTTCA 2070743 36 100.0 30 .................................... CTGAAAGGTCAAGGGAACCCCCAACAGTCA 2070809 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTGTGACTGCTCTTATTTTGAAGGGTAAACACAAC # Left flank : GAGCTATAATTTTGACGGGCAACAGCACCCTACAGATTTAGAGTATGAAAACAATCCTAAATTTAAGCACTATGTCGTAAATGGTGTTTTAAGGAAAAGAAAATTAGCTCCGGAAGATGAGATTCAGTGGTTATTAGATTGTACCGAAAAACAATTTGATAAATTGACACTAGCTGAATTAACCACCAAAACAGATACGATACAAAAAGCATTTCTTTTGATTATAATTCGAAATAAGTTTGCACATAATCAGCTCCCGAAGGGTATTTTTTATAGCTTGATAAAAAAGCATACTTATCCAGACGGGGTGGGGGTGTCAAATGATAAAACAGCTAGTAGTGTTATTTTAGAATTCACCCGAAGTGTAATAGCAATGTTTAGGGATTAGGTTAGGATTAAAAAATTGCTCTTTGACAAGACTGTTAATGTTTGAATATTCAAATTTTACATTTATAAAATATGTATTTTTCCCTTTAATGATAAGGCTTTTACAATATGAG # Right flank : CATAAAACCAATTGGGGCGGATATAGCTGGCGTTGTGGATATGCTAACTCCACGCTAAGTTAGCATATCCATCGTGCCATTAAAACTAAAAACTACAACCCTAAAAAGTTGTAGTTTTGTTTTTAAGGATATGTGATTTAGTGAGCACGGATTGTAAATCCGCGCTACCGGGGGAGAAAAAAACAATCAAGATAATAGATGATAAAAAGATTGCAAAATAAGCGTATTAGATTAGGTATAGTTTCAACAGTTTTCTTATTTGTTGGCTGTAAACAAAATCAATCGAAAGCATTGTGTGGAACATGGTCAATAAAAGAAATGACTGTTAATCAGAAAAATTTCGCACCATATTTATATGTCAATACATTCAGTCTTCATTGTAATGATAAGTCAGCGTGGTTTCATGCTTCATATTTTTTTGAAAGTGATAAGTCAGCACATTGGGAAATTGTAGAAAATAAAGGAGTCATAGATTCCATTAGAATCAAATCAAAAATTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGACTGCTCTTATTTTGAAGGGTAAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //