Array 1 4063373-4059628 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025636.1 Klebsiella pneumoniae strain LS356 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4063372 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 4063313 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 4063252 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 4063191 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 4063130 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 4063069 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 4063008 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 4062947 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 4062886 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 4062825 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 4062764 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 4062703 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 4062642 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 4062581 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 4062520 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 4062459 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 4062398 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 4062337 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 4062276 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 4062215 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 4062154 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 4062093 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 4062032 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 4061971 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 4061910 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 4061849 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 4061788 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 4061727 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 4061666 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 4061605 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 4061544 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 4061483 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4061422 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 4061361 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 4061300 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4061239 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 4061178 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4061117 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4061056 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4060995 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4060934 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4060873 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4060812 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4060751 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4060690 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 4060629 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4060568 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4060507 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4060446 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4060385 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4060324 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 4060263 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 4060202 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 4060141 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 4060080 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 4060019 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4059958 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 4059897 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 4059836 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4059775 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4059714 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 4059656 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //