Array 1 149042-145292 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZOY01000008.1 Fusobacterium naviforme strain CCUG 50052 contig_0000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 149041 27 100.0 33 ........................... CGAATTAGCGCCATCCTGTGCCAAAGGCGTGCA G [149028] 148980 27 100.0 33 ........................... TATTTTCAGAAAGAAACCGTATTTTCTTTGTAA G [148967] 148919 27 100.0 33 ........................... CAAATATCGTAGAAATAATTTTTCCGTCCGCGA G [148906] 148858 27 100.0 33 ........................... TTTGGAACGTTGACATGCCAGATGGCTTTTTAT G [148845] 148797 27 100.0 33 ........................... TAAACAAGGCTGTATAATAACCGCGTGCCTGCA G [148784] 148736 27 100.0 33 ........................... CACAGCACGATATGATTGTTGGTATGTATATCA G [148723] 148675 27 100.0 33 ........................... GTGTATCCGCGATCAAGTTCCATCCCTTGATAC G [148662] 148614 27 100.0 33 ........................... TTTTCCCCTTCACTCGCAGCCTCACCGCTCCGG G [148601] 148553 27 100.0 33 ........................... CATATCCGACGACGGCAAAAATATTTACATCAG G [148540] 148492 27 100.0 33 ........................... TAAACCTATTATTCACAAAAGGGATCAAGGAAA G [148479] 148431 27 100.0 33 ........................... CACTAGCGGAATATAGTTCACAAACTTGTGTTT G [148418] 148370 27 100.0 33 ........................... TCCTTTTTCTGGCTTTGTGCATGGGTCACCTGG G [148357] 148309 27 100.0 33 ........................... TTCCTCGCGCATATCGTGGTATTTTTACAGTTC G [148296] 148248 27 100.0 33 ........................... TATTTGATGTACTTAATCCATCTAGGGATAGTA G [148235] 148187 27 100.0 33 ........................... TATCTTGTATCCTGTCACCGTCATAGACTCTCC G [148174] 148126 27 100.0 34 ........................... TAAACCCGTTGCGCCGGGTATAAATAGCCAGTTA G [148113] 148064 27 100.0 33 ........................... TCCATGAGAGAGATCTACATGGATGGTTATTAT G [148051] 148003 27 100.0 33 ........................... TCATCGAGGATTATCCCCGTGACTGATACCGGT G [147990] 147942 27 100.0 33 ........................... TTTTCACTAAAAGGCTGTGCTTCGATAAAATCA G [147929] 147881 27 100.0 33 ........................... CAGATCGTAGGTTTTATTCATAGTTCCCAAATA G [147868] 147820 27 100.0 33 ........................... TGCTTTGGGTGAAATCGGGCTTGCAGGGGGAAG G [147807] 147759 27 100.0 33 ........................... CAGCCTGCTGGATGGCGGGCGAAGCCCGGCGAT G [147746] 147698 27 100.0 33 ........................... CACCTTCTGACATTCCAGCTTATTGCAGTTCAC G [147685] 147637 27 100.0 33 ........................... TCCTCATTTTCACGTACCATTTCTGCAATTTTG G [147624] 147576 27 100.0 33 ........................... TGAACAGGTCCAGAACCTGCTGAATACCATTCA G [147563] 147515 27 100.0 33 ........................... TCTGCCCAACGCCCGCCTAGTCGACAATGTCTA G [147502] 147454 27 100.0 33 ........................... CGAAAATCCGTATTTGCTGGGAGGGACCGGGAC G [147441] 147393 27 100.0 33 ........................... CGACTCCGACCGATAAGGTCAGCGAGATCATCG G [147380] 147332 27 100.0 33 ........................... CAGTACTAGATCGGAGCTCGAACAGGTACGGGA G [147319] 147271 27 100.0 33 ........................... CTTGAAAGCAAGTTACACACCGCCGAAACGCTT G [147258] 147210 27 100.0 33 ........................... CCGACGCCTTGTAATCGTACGCGTTTCCACTCG G [147197] 147149 27 100.0 33 ........................... TCCCAGCCGACCGTTTTTGCCGTTGATCCGGCT G [147136] 147088 27 100.0 33 ........................... CAGGCTGTTGTTCCAGAAAATCCCGTATAACCC G [147075] 147027 27 100.0 33 ........................... CAAGTAAGAAACGGCTCGCAAAGTTCGCACAGT G [147014] 146966 27 100.0 33 ........................... TACTGGTTGTTTTTAAGTCCCTTGCGGTCTCTG G [146953] 146905 27 100.0 34 ........................... AAACGCCCGTTCAAAAATCATTGAAAGGTGTTTT G [146892] 146843 27 100.0 33 ........................... CGGCAACGGGTCAAAGGACGATAAAATCCCGCA G [146830] 146782 27 100.0 33 ........................... TCTCCCACCAGTGAGGAAAACTCTTTCTTTCCG G [146769] 146721 27 92.6 33 .........................TT TTCTGTAACATGTCCGACGACGGCGAAAACACG G [146707] 146660 27 100.0 33 ........................... CCTCTTTTTCCAGTTCGATTACGAACCTGTCTC G [146647] 146599 27 100.0 33 ........................... CGATGTTTACAAATCTTTCCGGAGGTGAAGTAG G [146586] 146538 27 100.0 33 ........................... CAACCATGGCCCTTAACCTCGTCGGCGGGATTG G [146525] 146477 27 100.0 33 ........................... GATGGATGGGACTTGATTATTGCACACCCGCCA G [146464] 146416 27 100.0 33 ........................... CAGTTCCCGGATGGGACATGATACTGCCCGACA G [146403] 146355 27 100.0 33 ........................... TATCGGACTTCGGAACCAGCACTGTTACCTGAA G [146342] 146294 27 100.0 33 ........................... TCATTCGACCGGAAGCATCGAAGACGTACCAGC G [146281] 146233 27 100.0 33 ........................... CAAGCTCATAGTATCATCTTCGGGGCATCCTGT G [146220] 146172 27 100.0 33 ........................... TCGACCGAATTCCCGGCTCTTCCACCAGAACAA G [146159] 146111 27 100.0 33 ........................... CACCAAACCGTCTGCTATTTTGTTCGGATTTGA G [146098] 146050 27 100.0 33 ........................... GTGGCGTGAAGCAAATCCACATATCAAAGCGAT G [146037] 145989 27 100.0 33 ........................... TACCCCACCGCATTCCGGAGATCCTCGTTCTCC G [145976] 145928 27 100.0 33 ........................... TGATATGACTACCAAAAATCTTGAATTAGAAGA G [145915] 145867 27 100.0 33 ........................... TATCTCTCCTGTTGTCCTGGCTGCAAAGATATT G [145854] 145806 27 100.0 33 ........................... TATTCAGCCTTTGGCTGCATGATCTGGTTGTCC G [145793] 145745 27 100.0 33 ........................... TGTGCCGGACGTATCTGTCGGAAGTACTCCTCC G [145732] 145684 27 100.0 33 ........................... TGGCAGTAAAGTTACTGGAACGCTGGAAGATAG G [145671] 145623 27 100.0 33 ........................... TTGCCCCTAAATTTGCCCCATGACCGAAAAGAA G [145610] 145562 27 100.0 33 ........................... TGGCAGTAAAGTTACTGGAACGCTGGAAGATAG G [145549] 145501 27 100.0 33 ........................... CAGTGGCGGGGACGGCGGCGAAGGCAGTCGGCG G [145488] 145440 27 92.6 34 ....................A.....T GCTTTTGCTGACGCTCACCGCAATTCATAAAGCG 145379 27 92.6 34 ....................A.....T CTCAGCCCTTCATGGTCTCCCCGGTCAATCTGCG 145318 27 96.3 0 ....................A...... | ========== ====== ====== ====== =========================== ================================== ================== 62 27 99.6 33 ATGTTCCCCGCGCAGCGGGGGTGATCC # Left flank : AGCGACTCGGAGATCATAGAACTGGCAGCGCTGCTCGTAGAGGAAGGAAAGGTGGTGGGTGTCTATCACAGTTATATCTCTGCGACAACACACGTTCCGGAAGACGTACAGCAGCTTACCGGGTTAACTCCGTCAATCCTTGCAGAACAGGGAATTCCGTTGCGAGAGGCATTACAGGGTCTGCTGGACTTTATAGCAGATCATAAAATGGTCAGCCATAATGTGGCCTTCGATTGCGGTTTCATCCAGGCGGGCTGCAGAAAATCCGGCTTGAGGCCCCCGCGGAATCCCTGTGTTGACACTTTGACCATGGCAAGGCGTAAAATTCGAGGGGTGACAGATTATAAACTGAGTACGCTGATATGTCATTTGGGATTAGAGGAGCTGGAGGCGCACCGGGCAGAAAATGATTGTCGTATGACAGTTATGCTGTATGAGAAACTAAAGGAAATGCAGTGATGTGCCGGGAGAGAATCCTTTAAAATAAGGATTTGTTTAGT # Right flank : CTGGGAAAAACTCGCTGTGATGGAGCTTTTCCCATGTTCCCCGCGTGGTCCGGACAGTCAAAGAAACAATCATGCAGGTCAGCTCCAGCAAGAAATGGGCGTCCCGTCCGGAGCTGGACGCGGCCGGCAATCCAGTCCTCGGCAAGGCCGGAAAGCCCAGTCTTGTCAAGTCCTATACGGTTCTGCAGGATGACGCCATCCGCCTGATGAGGTCTTACGGCTATCATGATATTGAACGCGGGGAACGCGGAAGCGGCGAGGAACATTTGAGCGTCACTCAGTTCAAGGTCATGAAGGAAAAGGAACGTCTGACGAAACTGGAGGAGCGTTCAGCAGATCTGGAGAGCTCTCTGACAGGCCTTGAAGCGGATATCTTGGAGTCGGAAGCAGAGCTGCAGACGGTGGGTCAGACGCTGGAGAAAAAACAGGAGAAGCTCGATAAGCTCGCACTGGTCCTTAAGGGCGTGCAGGAGGTCACAGCCGGATTTGACGGCATAGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCAGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [19-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //