Array 1 297750-297120 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKO01000001.1 Pseudoflavonifractor sp. An176 An176_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 297749 36 97.2 30 ...........A........................ CAGGGGACTCATCGGCGAAATCATCGGCAG 297683 36 100.0 30 .................................... CTGGAGTTGATCTCCACGACAAAGGACTTC 297617 36 100.0 29 .................................... CGGTCCAGCACTGCCAGAGGCGTGCCATC 297552 36 100.0 30 .................................... GAAGTGCCACGGTCAACAATGACCCACGCA 297486 36 100.0 30 .................................... AAGAGCCTGTAAACGCCGCCCCGCTGACGG 297420 36 100.0 30 .................................... CAGATAGTACAGCCGTTTGTGTCTCGGTCA 297354 36 100.0 30 .................................... ACCACCCCCACTTGCCACGGGGGGAAAAGG 297288 36 100.0 30 .................................... ATGGCTCAGCCCCTGCATAGAGTGAGCCCG 297222 36 100.0 30 .................................... GGGTGACGGTCTCCCCGTCTATGTCCTCCA 297156 36 83.3 0 ..................C.......CA..GG...A | G [297123] ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.0 30 GTTTGAGAGTCGTGTTGTTTTAGATGGTAGTCAAAC # Left flank : TCTCTGATGTGGGAGGAACTGGAGGTGGAAAGTACACATCTCCAGCAGAGCATTCAGGGCTATCTGGCCCGTTTGGCGTCCCAAATTCCGGTTCCCGTGGAGTATGGAGAGGGGGATGCCGTGTGGCCCCTGCTCAAAGGGTTGAAATTTCAGCCGGTGCTGGATGGTGTGTCTCCGCTGGAGCGCTTGACCCAATACCTGGAGCTGTACCATCAACTGATGCCCCGGCCCTGTGTTCTGTTGGTGGGGATGCACCTGTACTTTTCCCGGCAGGAGCTGGAGCAGCCTTACCAGATGGCCCTTTATGAGAAGTGGAATGTCCTGGTGTTGGAACCACACCAGTGCCCTCCACAGCCCCAGGAGCAGTGGTGCATCATAGATCACGATGGCTGCGAATTAAGGGTTGATTCCCCGGGAGAAATCCCGTAAAATAGAATTGGTCAAGAGAAAACCATCTAAAACAACACAGCGCAATGTCGTGGCGTACACTCTCATTTGAG # Right flank : AACCTGCGTGCAGCCTTTTCGCTGCACGCAGGTTTTCACTTTATTGGAACGTAGGTGTCAGCACCAGCTTACCCTCCACACACTTGACGTCCAGGGCCACAATGGGCTGGTCGTAGTGGTCGATGAGCAGGGTGGCGATGGCGTCCTCCAAATCCTTCTGAATCTGGCGGCGCAGGTTGCGGGCGCCGTAGACGGGGGAGAAGGAGGTGTCCACCAGGTAGTCCAGCACGCTCTGGTCATAGGTGAAGGTGATGCCCTTGTTGCGCAGCACCTGGCTGAGCTCGCCCAGCATGATCTTGGCGATCTCCTGGAAGTTCTCCTGAGAGAGCTGGTTGAAGCAGATGATCTCGTCCACCCGGTTGATGAACTCGGGGCGCAGGAAGGACTCCAGGCCCTTCATAGCCTTATCCTTAGCCAGTTGGGTGGGGGAGCGGTCGAAGCCCAGAGAGCCGCCCTTGACGTTGCTGCCGGCATTGGAGGTCATGACGATGACGGTGTTC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTCGTGTTGTTTTAGATGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 25514-24392 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKO01000029.1 Pseudoflavonifractor sp. An176 An176_contig_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 25513 33 100.0 37 ................................. ACCGTTGTGGCCGCCCTGGTCAACTGGTGGAAGAACA 25443 33 97.0 36 A................................ CCTGGGGCGCGTCAGCCGCGGCCATACAGTGGGCGT 25374 33 100.0 34 ................................. CCCGCCAACGAGTACAACGGCTCCTCCATCACCG 25307 33 100.0 35 ................................. CATCGTCATACTCCTCTCTCTTGCGGCGCCCAAAT 25239 33 100.0 35 ................................. TATGCAACGGCGAACGACATTTCGTCCATCACGGT 25171 33 100.0 33 ................................. ATCCCCGTTTTTGATTGGCTGCGATATGCCGTC 25105 33 100.0 35 ................................. AGTTGCCGTGTAGTTGACCAAATGAACTCCACAGC 25037 33 100.0 37 ................................. ACCGTTGTGGCCGCCCTGGTCAACTGGTGGAAGAACA 24967 33 100.0 36 ................................. CCTGGGGCGCGTCAGCCGCGGCCATACAGTGGGCGT 24898 33 100.0 35 ................................. TCAGGTACACCGGCAGATTTCAGGATAGCACCATA 24830 33 100.0 36 ................................. TCATTGCCCCTGGAAACGGGGGCACATGTCGCCTTG 24761 33 100.0 35 ................................. ACCTTTGCTGCGCCCGCTGCATCAGCGTGGCCCTT 24693 33 100.0 33 ................................. ATAGCGTCACGCAAATGCTCCATACTCACACCT 24627 33 100.0 34 ................................. ATCCTGTATACAGGGGTACGCAAGGGAGAAGCCC 24560 33 100.0 35 ................................. CCGAGGAAGAGTACCACTGCAATGCGGCGACCGTT 24492 33 100.0 35 ................................. CATCCTGGGTGATGGCTGTAGAATACGGGCCATTA 24424 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ===================================== ================== 17 33 99.6 35 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : AAATAGTTGCCGTGTAGTTGACCAAATGAACTCCACAG # Right flank : ATCGTTACCTATGGGCGGATGATTGAACTATATCTGCTCTTTCCATTCTCTGAACTCGTCTCTTCTTTTCCCCGTATAAAATATCCATCGAACCTCATCGAACAATAAAAAATATCCCCCCTCCCTGTGCTGCATGAAAGCCACCTGCTTGGAGATACTTACATACAGTATCTTCCAAACGAGGTGGCTTTTTGTGCAAGGTAAGGTGGACTTATGCGGCGTGAACACGTCGAAACTCAAGGTTCTGAAAAGCGAGGAGAGCATTGCCCTGCTCCGCCGGGCCCGACAGGGCGACCAGGCAGCCCGGGAGGAACTGATTGCCGGGAATCTGCGCCTGGTGCTGTCGGTGATTCAAAAGTTTGCAGGCCGGGGCGAACACATGGACGATCTGTTCCAGGTGGGGTGTATCGGCCTCATCAAAGCCATTGATAACTTCAATGTGGACTTGGACGTGAAGTTTTCCACCTATGGGGTGCCCATGATCATTGGGGAAATCCGCC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 12515-33125 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKO01000022.1 Pseudoflavonifractor sp. An176 An176_contig_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 12515 33 100.0 34 ................................. CATCCTCCTTTTAATTCGGGCCAAACTCTGGCCT 12582 33 100.0 35 ................................. TTGTCCTGGAGCACCGTATAGCCGCACAGCAGGGC 12650 33 100.0 35 ................................. AAATTGATATATAGATCTTTCTTATCCTGGAGCAC 12718 33 100.0 33 ................................. TACAGGTCCAAAGCATGGCAGGCCTGCCGGGCA 12784 33 100.0 36 ................................. CTCCTTGTCCCACTCGTCCGGGCTATCCAGCTGGTA 12853 33 100.0 36 ................................. TTGGTGTCCTGCCATGGGTTGGGCCGGTAGGCCAGC 12922 33 100.0 35 ................................. ATTCCCGGCAATGTGTCCTACCCTGTGGAGAAAAC 12990 33 100.0 35 ................................. CAAGAGTGTGGCTGCCCGCAATCTCCACGAGGAGA 13058 33 100.0 37 ................................. CTCAAGAATGGCAGAGGCGGTGGCGCTAAGTGACCAA 13128 33 100.0 33 ................................. TTTGCCACTCCCGGTACCATGAGTGACCGCAGG 13194 33 100.0 35 ................................. AAACTGGTGCAAATAAGGTTTCTGCCGCAGCTGAC 13262 33 100.0 35 ................................. AACTTCTCCAAGGCTCCCGTGGTGGAGAGTGATGG 13330 33 100.0 37 ................................. ATGACTACGGCGTGGACGACGGTGAGCGGGGCGATAG 13400 33 100.0 34 ................................. TGAGGGAAGGCGGTACCATTGGAGAATGGGCAGC 13467 33 100.0 36 ................................. AATATAGCGGTCGATGGCGGCGCCGACAGTGAGGGA 13536 33 100.0 34 ................................. TGTTTGCTTCGACTTCGAAAAACTAAAAACGAAA 13603 33 100.0 35 ................................. CCTGATACTCTCAAGATTGAGAGCCTGGCGGACAG 13671 33 100.0 33 ................................. AATTTTGCCAAGGCTCCCACCGTGGAAAGCGAT 13737 33 100.0 36 ................................. CGGGCTTCGGCCTTTGTTCCCCGCCTCTACCGGCAC 13806 33 100.0 35 ................................. AATCTGAAAAATGTGCACTATGCGCCCATGACTGC 13874 33 100.0 36 ................................. CAGTGGGCGGCACCCCGTCTCCTGTGTGGGCCAAGC 13943 33 100.0 34 ................................. CAGCACCTAATGTGTCCAACTTGGACACAAGGGA 14010 33 100.0 34 ................................. AATTTTGCCAAGGCTCCCACCGTGGAAAGCGATG 14077 33 100.0 35 ................................. CCGGCTGGACCTCCACAACCGAGAGCGAGGGCCGC 14145 33 100.0 34 ................................. CAGCACCTAATGTGTCCAACTTGGACACAAGGGA 14212 33 100.0 34 ................................. AACCAGGATGGGCTGACTGTAAGCAAGACAGGCA 14279 33 100.0 35 ................................. TATGCCGATGGTATCGTCTATTGGCAGTCCAGCTC 14347 33 100.0 36 ................................. ACACCCTGGTTGTGGCAAAACCAGCAACCGCCCCTG 14416 33 100.0 33 ................................. TCTTTGAGCCGCATGGGCAGGAACAGGCCCACC 14482 33 100.0 33 ................................. CCATCCTCACCAGGCCTTTTCCCAACTGCCAGA 14548 33 100.0 34 ................................. ATAATGGTTTCGGGCGCAACTCCGAGAACCTTAG 14615 33 100.0 33 ................................. CAAAGCAAGCTAGAGGGCTGTACAAACGTGGTT 14681 33 100.0 33 ................................. AAGATGGCCCTGACCGATGCAATCAGCGTTGCC 14747 33 100.0 37 ................................. TCCTTTCCTAGCCCCCGCAAGGGGGCGCATGCCGGGG 14817 33 100.0 34 ................................. AACTTGGCACTGTGTGTGCGAATTGCAACGACCC 14884 33 100.0 34 ................................. CTTTCTCTCCCCCGGTCATTGACACGGTGGAGTC 14951 33 100.0 36 ................................. CAAAGCACCGTCAACGATAACCCCGGCATTCTCCGT 15020 33 100.0 33 ................................. TTTCCCGGCTTGCCATTGAACTTCCCCCGGTCT 15086 33 100.0 34 ................................. TCCAGTCGTCCAGTTCAGCTGACCGCCGTACACG 15153 33 100.0 35 ................................. GTCTTGTGAAATTGACGATAGAGTTTTAAGCTTGT 15221 33 100.0 34 ................................. TGCATTGCCAAGATGGTGGGCACAGCCCCCCTAT 15288 33 100.0 33 ................................. ATCCAGATTCGGAAATCGGTGTCGATGGGGTAT 15354 33 100.0 36 ................................. ACCGCCTAATGGAGAAAAAAAGGAGGAAGAAAAATG 15423 33 100.0 33 ................................. GGTCAACTTGATTTGCACGCCATCATCATACCC 15489 33 100.0 36 ................................. TTCCAGTCGTCCAAGGTCAGCCCGCCCGGGATGCAT 15558 33 100.0 35 ................................. CAAAGTCAAAAACCGGTATAGAAGTGACTGTTTTT 15626 33 100.0 33 ................................. CCCTGTCGTCCTTTTTGGTGATGCCCGTCTCAA 15692 33 100.0 37 ................................. ACTGTCAAAGAATGCACCGTAGGTGCGGCACTCGGTC 15762 33 100.0 34 ................................. AAGCGGCCCACGACAAATACAGCGTCGCCCTTTC 15829 33 100.0 37 ................................. CAGCTCCTCCAGTTTGTCGGCCTGGTCGGTGAGTTGG 15899 33 100.0 35 ................................. CTCCACGGTCTGGATGCCCAAAAGAACCTCGGGAC 15967 33 100.0 34 ................................. CATCGACCTCAAGTCCACTGGCGTGGCCCCCACC 16034 33 100.0 35 ................................. ACCGCCTTCGCTCCGGTGATGACCTGGGCTTTGGA 16102 33 100.0 35 ................................. CTCAATTCGCCTTTGCGGGTCGGTGTAGGGGTATT 16170 33 100.0 33 ................................. ATTAACGGCATGATCATGCCCGGCACCATCGGC 16236 33 100.0 33 ................................. ATCCTCACCCGTCTGGAACTGCCGGATTTCCCA 16302 33 100.0 35 ................................. CCCATGGGCAATAAAAATTCACGGACTTCCCGGAA 16370 33 100.0 34 ................................. ACTTTGCTGTCCGGCATATTCCCGAGAGACACTG 16437 33 100.0 36 ................................. AACGGCGGCATCAGAACCAGCTGCGGACGTTGTAGC 16506 33 100.0 34 ................................. TACGGAATCCTGGGCGACGTGGACACAGCAACAG 16573 33 100.0 36 ................................. CCGTCCAGGTCAGTGATCTGGTGCAGTTGTGGAGTG 16642 33 100.0 34 ................................. AGCGAAAACACGGGATGGAGAGTGGATGCCAAGC 16709 33 100.0 35 ................................. AACGAAAAACTCGCCGCATGCTCCGACGAATCCGA 16777 33 100.0 34 ................................. AGAGCGTCAGCGAGTACGCCAACAACCGTACCTG 16844 33 100.0 33 ................................. ACGGAATCGAACTCTATTGCAGCGTGTGGGGTG 16910 33 100.0 34 ................................. ACTCACTGGCCGAAAATGGGGGCAGGTGTATATT 16977 33 100.0 34 ................................. ATCAAAAGGGCAACGGGCCGCCCATGTCGTCCAG 17044 33 100.0 34 ................................. CTCCAAATAATTTTTGCCAATAAGCTTGATAAAC 17111 33 100.0 34 ................................. TCTTAACGCCAGATACCATGGACTTGATACCATT 17178 33 100.0 35 ................................. CAGGTACTCTCCAAGGCTGGTCATGAGAGACGATG 17246 33 100.0 34 ................................. CCGAGGCCACAAATGATGTTGCATGATATACTCG 17313 33 100.0 34 ................................. TTGTTGCTCCACCACACGACGCTGGGTGACTCGA 17380 33 100.0 35 ................................. ATTTCCCTACTGCGCTCCCTCCCAGAGGATTGCGA 17448 33 100.0 35 ................................. CTCGATGGTGCACCCAAATCTGGCGGCAGCGTGAA 17516 33 100.0 34 ................................. TTTGTCGGCCACAAGCGCGCTGTGGATGTTCCCG 17583 33 100.0 38 ................................. ATCCTCGGAGATTCCGGCCCAGTTCAGAGCGTCAGCAA 17654 33 100.0 34 ................................. AGAATGGGAAGGTCATCCAAAACAGATTGATAAT 17721 33 100.0 35 ................................. TGTACGCCTACCTGTATCAGCTCAGATACTGCATC 17789 33 100.0 36 ................................. GCCAGCAACTGTGAGGCCTCTGTGGCGGTGTCAACG 17858 33 100.0 35 ................................. CGATTTTGCCGAATGCATTTTGCCAAAAAGGCAAA 17926 33 100.0 35 ................................. TGTTGCTGTTCGTCGTCGCCCCGTGCGCTGACGGC 17994 33 100.0 33 ................................. TGCTTGGCCTGTCCGCACCCGGAAGAGCCGTGC 18060 33 100.0 35 ................................. TCCAAGGCCAAGGGAGCCGCACTGGTAGACAGGAA 18128 33 100.0 35 ................................. CTAGGTTGGGGCGGTCAATAGTAGACGCTGAAGTG 18196 33 100.0 34 ................................. AATTATGCCTTAACAGCAAAAGACCGAAAGTCGA 18263 33 100.0 34 ................................. ACCGCCTAATGGAGAAAAAAAGGAGGAAGAAAAA 18330 33 100.0 36 ................................. ATATGTGGTAAAGGGCAAGCCTGCGTGGAGTGGCTC 18399 33 100.0 36 ................................. AGAATCTCAATTTGCATCTTATTTTTGTCAATCATG 18468 33 100.0 32 ................................. CATCGTCGTTGAAGTCAGTGCACCCAGCTCCG 18533 33 100.0 35 ................................. TCCCTCGTGCTTTATATACAGCTCAATTGCAACAA 18601 33 100.0 35 ................................. CGTGTTGCTTGCACTCTTGGACCACCAGATCAACA 18669 33 100.0 36 ................................. TCTGCGTAGGCATTGCCTCCGGCGGAGGCGCCCAGG 18738 33 100.0 33 ................................. TGCACGGAACTTGTGACCTTGCCCAGCACTTGC 18804 33 100.0 35 ................................. GGAATCACCCCACACGCTGCAATAGAGTTCGATTC 18872 33 100.0 36 ................................. TCGCTCGTTCCTGTAGAACAGATTGTAAATCAACAG 18941 33 100.0 36 ................................. TGCTCAGAATTTTGTGAGCTGTGAAAAATCGCTCAA 19010 33 100.0 36 ................................. CAGATACATTCGGCGCAGAAAACCCGTAGCCTCCAC 19079 33 100.0 36 ................................. AGGTTGATGCCGGTGGTGTCGCTCCAGGGCTTGCCG 19148 33 100.0 34 ................................. CTGGGCCCGTAGTATGTGCGGACATCCAGGTACA 19215 33 100.0 36 ................................. CTGGGCCCGTAGTATGTGCGGACATCCAGGTACACG 19284 33 100.0 36 ................................. CACCGCCCGGTCCAACTCGCTTTGTTTCATACCCCG 19353 33 100.0 36 ................................. AAGTCTCTTTGCGGCGTCAGCGTACCCGGAAACAGC 19422 33 100.0 34 ................................. GTGGCAGTGCATTTTTTATTGCTCCGCCTCCGCC 19489 33 100.0 34 ................................. CAACCTCTTTCTCAAAATTGGCGTGTCCAAACCG 19556 33 100.0 33 ................................. ATCTTCCCCAGTTTGGAACTGCCGGATTTCCCA 19622 33 100.0 37 ................................. TGACCGTTTACAACGAACCCGTTCACAAAGCCAAGGC 19692 33 100.0 35 ................................. CGATGGTCGCCATCTGGGACGGCAGTCCGGAAATT 19760 33 100.0 36 ................................. TTCTGGATATCGGTCAATCTAGCAGCCATAGCACCA 19829 33 100.0 35 ................................. AAGCTGTCCGCCTTGCCACCGCCCTTGAAATACAC 19897 33 100.0 34 ................................. CTCCGGTATCTTGTCAATGATATGACGCTTAGGG 19964 33 100.0 34 ................................. AATTATGCCTTAACAGCAAAAGACCGAAAGTCGA 20031 33 100.0 35 ................................. CCGGCCTGATTAAGTCCATCCCTACCATCGTCCAG 20099 33 100.0 37 ................................. AAGATGCCGTCCCCGGTGCCCAGGGCAACATTCCCGG 20169 33 100.0 33 ................................. ATATATGCCCCGTTTGTCAACTGCCTGGACGTG 20235 33 100.0 35 ................................. CTAACAATTGGTGGGACAGTACCAATTATGTCGGG 20303 33 100.0 35 ................................. TAAAAGTGTTGTTATTTTGACGGATAGAATTTTGA 20371 33 100.0 36 ................................. AATAGTGATTGACCGTTTAATGTTTTCCAGTCTCAT 20440 33 100.0 37 ................................. AGAAAGATTTGATGGAATAATCGACAAAAGAGCCATA 20510 33 100.0 35 ................................. TTGTCCAATACTTAGACCCTTCACCAATAACATCG 20578 33 100.0 36 ................................. TAGCAGTAGACCGATAATATTGTTGAGCTTCAAGAT 20647 33 100.0 35 ................................. GTCATCGTCCTCCCAGTTACAAGCTTGACACTCTT 20715 33 100.0 34 ................................. AATGTGGGCGAAAGTCCAGCCAGCCTCGGTGCGG 20782 33 100.0 35 ................................. TTAGAGACAATAATATCATCGTCTCCGTCTGATTG 20850 33 100.0 35 ................................. AATGAGGACTATGTGACATTTCCCAGGGACGATAT 20918 33 100.0 36 ................................. ACAAACAGGCCAATGGGACACACGCCCTTAAATCGT 20987 33 100.0 34 ................................. TCAATCGTCATAGTGGCCCAAGCAGGAGATAATA 21054 33 100.0 34 ................................. CCTGTGGGCAGCTTTGAGCGGAAGGGCCATTTTG 21121 33 100.0 34 ................................. ACATCTTGCATGACGCTCTCCAGATACCGGAGGT 21188 33 100.0 33 ................................. CAGGGCCGGAAACCGCCCCTAATCCTTACCCTG 21254 33 100.0 36 ................................. CAGTCCGCTCGGCTCTGGTTCCAGTGGTTGTCGTAG 21323 33 100.0 36 ................................. ACACCACCCCTGTATATCTGGAGGAGCAGCAGGCGG 21392 33 100.0 36 ................................. TCCCCGGTATTCCCCACCCAGGCAGGGAACCCGCAG 21461 33 100.0 33 ................................. TGGGTAGGCACAGGAGCTGGGGTGGTGGGCTTG 21527 33 100.0 35 ................................. AAAACACATTACAGGATACTTTAGGTGCTCAGAAG 21595 33 100.0 35 ................................. AATTAGACTCGCAATATAGTTGCCATAAGACAATA 21663 33 100.0 34 ................................. TTATAATATTTTGCCATCTTGAATTGGCTCTTGG 21730 33 100.0 34 ................................. CTTTGGGGAGACCAATTGGATGCCATCCTTGACC 21797 33 100.0 36 ................................. TATGACACTGAGGGCAATATGCTCTCCCTTGTTGGT 21866 33 100.0 36 ................................. AGTTCATATATAATGCCTTCAAAGAGATTTGGAGCA 21935 33 100.0 34 ................................. CGCAAAGACCTCTATGCCATACGAAAAGTAGCTG 22002 33 100.0 36 ................................. TTGAGGATAACGGGTATGCAATACGCTATATCCCCC 22071 33 100.0 34 ................................. TCAGATTAAGGAGGCTGGGCTTGAGTTGACTGAT 22138 33 100.0 34 ................................. AGGGGGGATTGGGAAGGGTTTTTGAATGGCTTGC 22205 33 100.0 36 ................................. ATTGGTAAGCGGGTTGCCTGGTTTGTGAACTTTGAT 22274 33 100.0 34 ................................. TCAGATTAAGGAGGCTGGGCTTGAGTTGACTGAT 22341 33 100.0 37 ................................. CATGGGATTGGTCTTTGACATTACAGGCTCTGATTTG 22411 33 100.0 36 ................................. CTGGTGGCGGCGGTGGTGTTTATCGGCGTGGGCCTG 22480 33 100.0 35 ................................. GATATCCGCATGACGGTTACCGACTATTTTGGGGC 22548 33 100.0 35 ................................. CTTCTTCGGCTCTTTTGCCGTTACCGTTCCTCTCC 22616 33 100.0 34 ................................. AACGTAGCCTGGAAAACTAGGCTCTCCGGCGGGC 22683 33 100.0 36 ................................. TGGGTAGGCACAGGAGCTGGGGTGGTGGGCTTGGTG 22752 33 100.0 35 ................................. TGATTGGTGTGGCCATGGCCACCCTGGTGGAGCTG 22820 33 100.0 35 ................................. CTCCAGGGCATCTTCCTGACGGACTGGACCAAGAT 22888 33 100.0 33 ................................. TTTTCCCGCCGGACGAGCGGGACTTTACCACCC 22954 33 100.0 34 ................................. CCCAAGGGCACCATTGATCCACTTCTCACCGTCC 23021 33 100.0 34 ................................. TGGAACAGCTCCAGCTTGAGGGGCTGGCCCAGGC 23088 33 100.0 34 ................................. TAACACTAATCTGGATGCTACTAAATTCCACGTA 23155 33 100.0 35 ................................. TGATTGGTGTGGCCATGGCCACCCTGGTGGAGCTG 23223 33 100.0 33 ................................. TTTGGGGGGTGACCTATGGCAGACCGTATCAAG 23289 33 100.0 34 ................................. TCGTTGGTGGCCGTCCCTGCCCAGCGGGCGGCGG 23356 33 100.0 35 ................................. CCCCGGCCCCCTGCCGGGTCCTATGCCGTTTACAT 23424 33 100.0 36 ................................. ATCGATCATTCCAATTCCTCCAATCTCTTGATCTGC 23493 33 100.0 35 ................................. ATTGCCAATGAAGTGTTGTCCGTGGTGGAAAACGC 23561 33 100.0 34 ................................. TCAAGCGCCCACCACGCAGGCTTGCACTTCTCGA 23628 33 100.0 33 ................................. TCCTCATTATCGTCAAACACTACTGGGCACTGG 23694 33 100.0 37 ................................. GGTGTTATTTGAGCGACAACGACTGCTACAAGGCCGG 23764 33 100.0 33 ................................. TCTGGTGTCGTCCGCATCAGCCAGAGGCCAGCC 23830 33 100.0 35 ................................. GATTGCAAAGGCATCCGAAAGCCCGGTGATGTTGG 23898 33 100.0 33 ................................. ACTCACCCCTTTTCAGCCGCTCCACCTCACTGG 23964 33 100.0 33 ................................. TCTGTGTCGATAGACTGCCCACAATGCGGACAC 24030 33 100.0 35 ................................. CACACCGCAATTGGTACACATCCAGTGGCCGTCTC 24098 33 100.0 35 ................................. ACTAGACTTACCTAAACTACCCTTACCTAACCTAA 24166 33 100.0 35 ................................. ATCACGTACCTGGTGCGGACTCTCACCATCAAAGT 24234 33 100.0 34 ................................. TCCAAGGCTCTGGCTGACCCCGCCAACACTGGAA 24301 33 100.0 36 ................................. AAGATAGAAGAATTTGGGAAACTCCCAAAACTAAAC 24370 33 100.0 34 ................................. CACCAATGCAAGTTCTCCACCTCTGTCAGGTCGA 24437 33 100.0 34 ................................. CTCTAACGTGTTCCACCTCAATGCCCCACCGCTC 24504 33 100.0 34 ................................. TCGCTGATTTTTCGGTTTGGGTTGCCAAAATAAA 24571 33 100.0 34 ................................. GATGTTCCGCAGGCTCCGTCGAATCTCCATGCAC 24638 33 100.0 34 ................................. TCACGTATGGGCACCATTGGCAGCGGGTCATATC 24705 33 100.0 36 ................................. TCTGCCGTCCTGGCCCTTAAAGTCACGATCTACCGC 24774 33 100.0 35 ................................. TGCTACAACCTACCGGCACGAATATACTACCACAC 24842 33 100.0 35 ................................. CTCGTCGGAAATGTTGGCCAGACGGCAACGGGAGC 24910 33 100.0 34 ................................. GTTGCCACGCCTACACCCCCTCTGCGAGGTAGTG 24977 33 100.0 34 ................................. ATATATTCCTTCCACCGATGCGGCCTAATCGGTC 25044 33 100.0 35 ................................. TCTCCTCTCTCTCTTTTTGCGCCCAGGACAACGCC 25112 33 100.0 35 ................................. CTGCTTTGATACCACAGTCGGCACGGGATCGAGAG 25180 33 100.0 34 ................................. AATGGCTCTAATTTTGCCGTAAAGTGCCCAGATT 25247 33 100.0 34 ................................. CCATCTGCATCGGTACAGCACTCATACATCCAGT 25314 33 100.0 34 ................................. TCCGGTGTTCCAGGCTCCTGGAAGTCTCGTGCCC 25381 33 100.0 37 ................................. CTTGTCCCAGGGTACAGGACAGGCGCACATACCCCAC 25451 33 100.0 36 ................................. CATTGTGAGGTGCACTCATCATGAAGCTTCCAACCC 25520 33 100.0 32 ................................. TATGGTGTCAAACAATGGAATCACATGTGAGT 25585 33 100.0 35 ................................. GGAATACCTCTCACAGAGCGCATAACTTCGGCATG 25653 33 100.0 33 ................................. TTGCGGGATAACCTGGATGAATACTTTGTTGCT 25719 33 100.0 37 ................................. AAAAAGGTGTACCAGAAGTCTGGTGCCGCTGCGGCCT 25789 33 100.0 34 ................................. TCTGATGTATTCCAGCCCGTCTTTTCCCCACTGG 25856 33 100.0 36 ................................. AACGTGCAGGAGGTTTCCAGTGCTGCATGGCTACCG 25925 33 100.0 33 ................................. TACCGGAGCAAGGCATGGCAGGATATGCGCAAG 25991 33 100.0 34 ................................. TCCCTCCAGCGTCATCAACGCCTTTGGCCTGCCC 26058 33 100.0 35 ................................. TCTTCTACCACCCCGGAGGCTGCGGCTCGTACCAT 26126 33 100.0 34 ................................. AAGGACATCTACGGTGGGGTGTACGACACCCAGA 26193 33 100.0 35 ................................. TTCCAACCTGGCAGGAGTTTCTGGACAGAAAGATG 26261 33 100.0 34 ................................. CCCGTTGAGGGCACGGCCGGCAGCCTTGGCCAGC 26328 33 100.0 33 ................................. CAGCCGGAGAGGCTGGCCCAGGCGGCCCGACGG 26394 33 100.0 35 ................................. GACTTGAAGCTGGGCTAATTGATCCTCGATGAAAA 26462 33 100.0 36 ................................. TTGGTGTCCTGCCACGGGTTGGGCCGGTAGTCCAGC 26531 33 100.0 36 ................................. TTCACGGCATCATAGCCCAGTTTGGCCTGGTCCATC 26600 33 100.0 34 ................................. TTAGCGTCTGGACGTTTACTGGCAGATTACTAAT 26667 33 100.0 36 ................................. GTCATCGTCCAGCGCCCACCGTGCCCGCTGGAGCAG 26736 33 100.0 35 ................................. GATACCGACGGCAACATGTGCCAACTCGTGGCACA 26804 33 100.0 33 ................................. AAGGGCTCGAAGATACGGCATGACGATGGTGGT 26870 33 100.0 34 ................................. ATCTATGCCTCGTTTGTCAACTGCCTGGACGTGG 26937 33 100.0 34 ................................. AACCGCAGATTTGACGGACTGTGCATCCGATGCG 27004 33 100.0 35 ................................. TTTGGCCCGTAGTACGTTCGGACATCCAGGTACAC 27072 33 100.0 36 ................................. TCTGCTGACTAATGGTGTTGTATGCGTTCCGGGCGG 27141 33 100.0 37 ................................. TACGAAACCGGGAGAGGGAGATTGGGAATGGAGAGGA 27211 33 100.0 34 ................................. ACACCACACCGGCTGTCCATCCATCCCTCGCAGC 27278 33 100.0 35 ................................. AATCCCTCTTTCTGCATGTATTCCCGCAGGGAAAT 27346 33 100.0 35 ................................. CGTGGTTACGCCGTTGATACCAGAGACGGCCTCGC 27414 33 100.0 35 ................................. TCTGCTGAAATTCGAAGCGTGGAGCGGCCCAAGGA 27482 33 100.0 35 ................................. AAAATCGAGGCCACCGACTCCCGTGGGAACACGAC 27550 33 100.0 33 ................................. AAAAACATGATGTAAGCGGGGGTGCACACCCGT 27616 33 100.0 34 ................................. CGGTGTCATTGCCCGGATTTGGTCGGCGGTGTAC 27683 33 100.0 34 ................................. TGACAAGGCTGACCGGTATCTTGCCGGTCTGCTC 27750 33 100.0 34 ................................. TTTTATGCGGCACAAAAAAGGGAGGAGCTAGAGG 27817 33 100.0 33 ................................. ACTGGTGGAAATTCATGTCTTTGTTTCGCTCCC 27883 33 100.0 35 ................................. CTAAAGCTCATCCTATCCATCGCCAAAGCTATCGG 27951 33 100.0 36 ................................. ATCCTCGCCTGACTTTCCAGGCGGCGGGAATATCCA 28020 33 100.0 36 ................................. ATCCATGCAGTGGTTGTATGCATCAACAGGCACCCC 28089 33 100.0 35 ................................. CCGATTGGAGGGTAGAATGGCACTACAAACAAAAC 28157 33 100.0 35 ................................. CGAGATGGGGCCGGACTTGATGGCATCGGGAAGCA 28225 33 100.0 35 ................................. TTCGAATATCGCCCCAGACACAAACAGAAACAACA 28293 33 100.0 34 ................................. GTGTCGGTTGCAACGGGCGGATAGCGGTAGGCAA 28360 33 100.0 34 ................................. ATCTTAGCCGTTGCGCTGTACGATTGATTTTCGA 28427 33 100.0 36 ................................. CCGACAGGTACTCATCTGCCGTAACATACCGTACAG 28496 33 100.0 35 ................................. CTATCTACGACTTTGGCAAGACTGACTTTAACTTC 28564 33 100.0 34 ................................. TATGCCAACTCCCAGCGCATGAGCTGGTGGTGGG 28631 33 100.0 35 ................................. TTTTCCTCGCCGCGCTTGATGTAGAATCCAAACGG 28699 33 100.0 34 ................................. GATGGGTGCAAGGTTTTGTCCATCGAAAATCTTC 28766 33 100.0 35 ................................. TCTATGTTGACTGGCAAGGGCGAGAAGGGCATGGC 28834 33 100.0 34 ................................. TGGTCAACCCAGAGGGCAACGGGTACATTTTTGG 28901 33 100.0 35 ................................. ACGGTGTAGGGTGTAAAGCCCTGGGAGCCAGTACC 28969 33 100.0 34 ................................. ATTGGTGGTGTTGATGATGGCAGAGCCCACCGGG 29036 33 100.0 33 ................................. CTCAAATGCCGGTGCCAGACTATCCACAATCAT 29102 33 100.0 35 ................................. GAGACGATGTAAGGAGGATGTACTGTGGCACGAAA 29170 33 100.0 34 ................................. TCCTCCTTCGTTTGAGCTTCCTGCCCTGTGACTA 29237 33 100.0 35 ................................. CTGCAACGGACAGCCGTGGGAACACGACCACCGCC 29305 33 100.0 35 ................................. CCCGCACCAGCCCCTACGGCTATGGTATCTACGCC 29373 33 100.0 33 ................................. CCCCTGGGACGTGGCCGTGATCTGATACATGGG 29439 33 100.0 34 ................................. TCATCATACATCCCCAGGGACTTTGGGGTGAGGC 29506 33 100.0 36 ................................. CATACCACCCCTGTATATCTGGAGGAGCAGCTGGCG 29575 33 100.0 35 ................................. CGTGGGAGGTCTTGGCCGACCTTGGCGAGCTCCGC 29643 33 100.0 36 ................................. CTGGATACAGGGGCCGGAAGCCCGGCCCCTGTGCGG 29712 33 100.0 36 ................................. CATCATACGTGGCTCCATGCTGCTGCCCTTGATCCT 29781 33 100.0 35 ................................. TCATGTATAGCCAGGGTCAATATTTGGCCCGAAGC 29849 33 100.0 35 ................................. TTTGCCTGGAGCAGTGCAAACTGGAGGGAGAGCAG 29917 33 100.0 34 ................................. CTGGTGGCGGCGGTGGTGTTTATTGCCGTGGGCC 29984 33 100.0 34 ................................. CCTTGCCAAAGTAGTTTTTGGTGTTGGCCACAAA 30051 33 100.0 34 ................................. TTTGTTGATCCGATTCAGAAAGGTTGATGGGACC 30118 33 100.0 35 ................................. CAGAAATATGGACTCCTCCAGGCCATACCGCTTGG 30186 33 100.0 36 ................................. CACAACTCCCCTAAATCGACTAGCGGCGCCCTCGAA 30255 33 100.0 36 ................................. ATCGTAGGGTAGGCATCCGGCGTCAAAAAAATCCCG 30324 33 100.0 34 ................................. ATCAGCTGTCACACTAAATATCTCTGCAAGGTGT 30391 33 100.0 34 ................................. TTCCCGCCTCCACCCAGCTGTGGCAGCTGGACCT 30458 33 100.0 36 ................................. CACAGACTTCGGGGATTATGCCGAGGTCTACGAGTC 30527 33 100.0 34 ................................. CCACCGAGGGTGAGCAGCGCAATGGCAGCTCTGT 30594 33 100.0 34 ................................. CGCAATCCACGGAGGTGGACGATGGCAAAGGCAA 30661 33 100.0 36 ................................. TTGTCCACGGTGGTGTAGATGTTGGCAACGATGGGA 30730 33 100.0 33 ................................. TATTTTACCCCTTGACATTACGCCTATAAAGGC 30796 33 100.0 37 ................................. CACGGATTCCTCGGCGGTCTGGCAGAAGATTTCATCC 30866 33 100.0 33 ................................. CTCGGCGTTGTCCATCGTGGAGACGCACTCCAC 30932 33 100.0 38 ................................. TTGTCGTTGTACCGTGCGTTGATGATCTCAAAAAGCAG 31003 33 100.0 33 ................................. TTGAGGTCGCTGTCGTACTTGCCCTTTGCCACA 31069 33 100.0 33 ................................. TCTAACATCTCTCCACCTCGGTACACCAGGCCA 31135 33 100.0 37 ................................. ATCGTTTTTATCATAGAACAGTCTTATCCTCCATCCG 31205 33 100.0 35 ................................. TCTGCTAAGACTCTATTCCAGCGTGTGAGAGACGG 31273 33 100.0 34 ................................. CCCCGCCGTAAAATTTACGGTAGCCACCGCCACC 31340 33 100.0 37 ................................. TCCATAAAGCCCTTGAATGCATTGGGGACCACCACCC 31410 33 100.0 33 ................................. GTCCTCTCCGGTGATGAACTGTCTGACCTCCCA 31476 33 100.0 33 ................................. CCTGTACGTCAAGAAGGATGTGTTCGATGGCCT 31542 33 100.0 34 ................................. TCAAGGCCATGTCAGCCTCCCACACTCCATACAT 31609 33 100.0 34 ................................. TTGCCGATGGTCGCCATCTGGGACGGCAGGCCGG 31676 33 100.0 35 ................................. TTTCGCTGTGGCGTGATAATCGGGTTGTCGTCAAT 31744 33 100.0 33 ................................. ATGTATTCCCGCAGGGAAACGAGCTGTGCTCTT 31810 33 100.0 37 ................................. GTCGATAGCTCCAACGCGGACGGCCTCAGAAAGGGCC 31880 33 100.0 33 ................................. GCCATTGATGTCATACGACTTATACGCTTTCAT 31946 33 100.0 34 ................................. TGTAGTGCGGGGTTATGAACCGCTCAACAAGGTA 32013 33 100.0 35 ................................. TCCTTTCGTTTTGCGGGGTTGCTCCCCCGTCCCTG 32081 33 100.0 34 ................................. CTGACGTAAACACGCTATACACTGACACGGGCGA 32148 33 100.0 34 ................................. ACGTAGGTGCTGCCACACCTACCATGCAGTCACC 32215 33 100.0 35 ................................. TATAATGCGGCACAGAACAGGGAGGAGCTGGAGGG 32283 33 100.0 35 ................................. TATACTCCTCAGTCAAGGCCTCCACCACCCTTGCC 32351 33 100.0 36 ................................. ACCTCCGTGGATTGCCCAGGCGAATCCGTTGCCCGC 32420 33 100.0 35 ................................. TCGGTCAATCCCATGATATAGTCCACAGAGCACTG 32488 33 100.0 33 ................................. CAACGAATCCTGCCCACGAAGTGCAATTTTATA 32554 33 100.0 35 ................................. TTTGCGTCCTGCCACGGGTTTGGTCGGTAGTCCAG 32622 33 100.0 35 ................................. TTGCTCTGACAATCCATCACACCATCCCCCGCCGG 32690 33 100.0 34 ................................. ACTATGCCGTCCAGACGGCAAACGATGACACTCC 32757 33 100.0 34 ................................. ACTATGCCGTCCAGACGGCAAACGATGACACTCC 32824 33 100.0 33 ................................. TGGGCAGCTGCCCGGTTGGCAGCCTTGACCGCC 32890 33 100.0 35 ................................. TTGGTGATGTTGCTGCTGGAATCCCCATCGAAGCA 32958 33 100.0 34 ................................. TTATTGCGTTTATCCTTTGCGTTTGCTGGTTTGC 33025 33 100.0 35 ................................. TATGCAACGGCGAACGACATTTCGTCCATCACGGT 33093 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 305 33 100.0 35 GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Left flank : GTATCCGCCGTTTCTCTGGAGGTAGAAACATGCTGGTTCTGATTACGTATGACGTGAATACCCAGGATGCCGCTGGGCGCAAGCGGCTGCGGCAAATCGCCAAACAATGTGTCAACTACGGACAACGTGTCCAATGTTCTGTGTTCGAGTGCCTGCTGGACGCTGCGCAATGTCGTATGCTTCAGGCCAAGCTGTGCAGCATTATGGATGCCGAGAAAGACAGCCTGCGTTTTTACTACCTGGGCAACAAATATGAGAGTAAAATCGAACACTTCGGTGCCAAACAAACCTATGAACCTGAGGGTGCGTTTATCTTATAGGTTTGCCAGGTGCGAAGGGGAAGCTCTCATAACATCCCTGGGAGGTTCGCACACGCATTTTTCCAATTTATGTGAGGAGTAGAGATTTTCTCACCTTCGCAATTGTAACACTTAGAATTTATGCTGTGCAATCTATGCAAGGAACACAACGATTCACCCCGCACCTTGTATAGATTTGCT # Right flank : ATCCCCGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.30,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //