Array 1 58624-57314 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJSGU010000025.1 Escherichia coli isolate Fecal samples, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58623 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 58562 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 58501 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 58440 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 58379 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 58318 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 58257 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 58196 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 58135 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 58074 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 58013 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 57952 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 57891 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 57830 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 57769 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 57708 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 57647 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 57586 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 57525 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 57464 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 57403 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 57342 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //