Array 1 7430-8043 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000108.1 Fischerella sp. FACHB-380 contig108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 7430 35 100.0 38 ................................... ATTAAGCACAGCTGCTCCAGCACCAGCACCAGCACCAG 7503 35 100.0 38 ................................... ATAAGTTCCCAGATCTGTCCGCTATGGACAAAGGTCAA 7576 35 100.0 37 ................................... GCTGCTGCTGCATACTTCCTCCCTGACGCAAGAACTC 7648 35 100.0 40 ................................... TTCAGAGAGCCGCTCGTCTGGTTTGCCGCAAGGATCAGAT 7723 35 100.0 35 ................................... TCTCTACCAGTGACTCCCACATTCTGCTTAAATTC 7793 35 100.0 38 ................................... TTAGTTGTACCAACTACAAACCCACATCCAAACAAATC 7866 35 100.0 35 ................................... TATAAGCAAAGCTACGGTCAATCCCAGCACAATTG 7936 35 100.0 38 ................................... TTCATCAAGCAGTTGCGTAAGCAACTGTAGTTCTTCTT 8009 35 91.4 0 ...............................GTG. | ========== ====== ====== ====== =================================== ======================================== ================== 9 35 99.0 38 GTTTTAAATCACTTACCCCTCACGGGGATGAAAAC # Left flank : TTGAAAAAGTTTCTCAAGCACTGGGAAGAAAAGCTGCAATCTGAGTTAACGCACCCAAATACAGGATATAAAGTTAGCTTTCGCAGGTGTTTAGAGTTACAAGTGCGGGAGTATGTAGCTTGTCTGATGGGAGAGGTGAAGATATATAGACCAATGATTTGGAAACCTTAATAGAGAGATTGCATTGTGTTGGTTGCTATGCTATTGTTTACACCAACACCTGTACCTTGAAAACTTAATCAATACATATTCTCTGCTTGTAACCTGATAGTTAGTTTCCTTAAGGCATTTTGTTAAGAAGTGTAAACTGAGGGGGTCGTCTAACAGACCAAAGGCTGATTGTTTCGTTGATCCCCTCAGATAACTTAATGTGTCAGGGTTTGAGTTACTTGCAGACTCTAGTTATTGTCAATAATAGTGGTTTATTGACAGGTAAAATAGACCCCCCTCAGTTTTACAGTTCTGTAAGCTTTATTTGGCAAGCTTTCTGTAAGAGTAGA # Right flank : GACTATCAGTCGCTCACAAGAGTGAGTAACTTTGAACTACTCCAGGCTAATGTCTGAGCCTGTACCTGCCCGAAGGGGCATTGTGGGTAACTACGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAAATCACTTACCCCTCACGGGGATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 5337-7496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000010.1 Fischerella sp. FACHB-380 contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 5337 37 100.0 38 ..................................... ATTTTTTTCTCCTAGTCACATCTCTATTATATATATAG 5412 37 100.0 36 ..................................... CCTTTCTTGGGGATCAAAATCTTTACCACCAGTAAA 5485 37 100.0 36 ..................................... GACCACTTGCCCGGGCTTACGGCGGAAAGTGTAGAA 5558 37 100.0 37 ..................................... TGGAGGTCTGGGGGGCGCTCCAGCTGGCTTCACTACC 5632 37 100.0 35 ..................................... CTGGAGTGTACTGGCTACTTTCTGGGCTTTACTTA 5704 37 100.0 35 ..................................... CCCTTTGAGGTCACCCACAGGGAACTTAGCGTCAC 5776 37 100.0 35 ..................................... GTCTGTTTGTGCTGAATATCTTTAATCTGGTTATT 5848 37 100.0 37 ..................................... TCCTGGTATCTGATGCGGTCAAGAGACACGATGCGGG 5922 37 100.0 36 ..................................... GGCTGGGCTTTCTCGGCTTGCCATCACTTTCTCCTA 5995 37 100.0 34 ..................................... TTAGGTGCCATAATACGCCTCTTTAGCCCGCTCC 6066 37 100.0 39 ..................................... AATTCCCAAAGAGCTATCTCCAGCGGAAAGAGCCTCCAA 6142 37 100.0 36 ..................................... GCGCCCACCCTCGCCTTGGAAGAACGAGCCTTGTTC 6215 37 100.0 34 ..................................... CATTATGTAATCGAAACGGTGCCTCATTTGATTG 6286 37 100.0 33 ..................................... GTTGCCATCTGTGGCACTCAGCGAGGCGGCAAA 6356 37 100.0 41 ..................................... TATCTCGGTAAAACAGAGACAAACCCAGGCATTCAAATAGC 6434 37 100.0 38 ..................................... TCCGTAATATAGTCCATTTTGGCCTCCTCTATGTCTAT 6509 37 100.0 36 ..................................... TGGGTAGCCTTGGGGTATCCTAGTGGAGGCCTTGGG 6582 37 100.0 35 ..................................... GATGGCTCCTATACTTAGGTTGTTGTTATTGTTGT 6654 37 100.0 38 ..................................... GAAATTAATTGATGAATCTTGAAACATTGTTTTGCTCC 6729 37 100.0 39 ..................................... AAGCGCTATTAGCTTATTAGATTGAGAATCGCTTATTTG 6805 37 100.0 37 ..................................... TGTGGATTTTTGAAGAGTACCCGCAGGTCGGGGTTAA 6879 37 100.0 35 ..................................... GGCCTTACAAGCGGCTGTAACTCAACTTCAGCAAG 6951 37 100.0 36 ..................................... AACTATGTTTGGCGGGATTCTAGAAGAAAACAATGG 7024 37 100.0 36 ..................................... TGAAGTGCGATCGCGCTAACTCCGGTACATTGACGC 7097 37 100.0 37 ..................................... ACCGCGATAATAGACGGTGATGCCTTCTACTTCCCTG 7171 37 100.0 36 ..................................... TTCATTGTAAGACTTTAGTTGCCCTAAAGCCAAAAT 7244 37 100.0 36 ..................................... GTGAAAATAACAGAGAAATAAAGGAGTGATGAAATG 7317 37 100.0 35 ..................................... CCGCACCCTCTGATACTGGTACGCTTAAATTGAAT 7389 37 97.3 34 ..................A.................. CGATTTTGATTATCGAAAAGGCGTTAGCTGTTGC 7460 37 91.9 0 .......T................C........G... | ========== ====== ====== ====== ===================================== ========================================= ================== 30 37 99.6 36 GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Left flank : TTCAAAGTTGTCTGATAATTTATTGGACAACCTCAGAGAAATGATTTAAAGCTGGCTATCTACTCAACCTACCGACAACTTGATTGCATTCCTAAGTAACCTTTGTGTAAAGTTATGGTGTTTTTAAACGCAGAGGGACGCAAAGTTAGCGCTGAGGTTCGCAGAGTTTTTCAGAATTATATTCGTTACGAGTTTGTGAAATTTTGTACTAAGGTTGTTGAGGATAATAGGGAATGTTGAGTTTCTGTAGTTGCGCCAACCTGTAGGTGTTTTATATAAAGACTCAAATTTTCTGCCTGAAAGCTATGGCTGTTGCGGGTTTGAACCATTCACATCAAAACAGAGGTTTGCGCTATGTCTGAAACTCTTACCAGTAAAGCTTTTGAGGCAATTTTTTTCAAGTCACTCTTGACACTGCGATCGCTCAAAAGCTATATTTACTCCAGGTCTGCACCACTGAACCTTGAAAATCAAATACAGCAAGGCTTCCAAATTGAGCA # Right flank : CTTATAAAGAAGGCTTGTTGAAAGCAATAAAAGTTACTATAAAAGCTCTTCACTTTTTACCCTTCTGCCTTCTGCCTTCTGTCTTCTGTCTTCTGCCTCCTATAACACTCCTTTAGAACTGGGGATCAACCCTGCACGACGGGGATCAATCTCTATCGCCATCCGCATTGCCCTCGCAAATGCCTTAAATGTGGCTTCTATAATGTGATGAGAATTAATCCCATCTAACTGGCGAATGTGCAATGTCATCTGGCTATTACCAGCCAAGGCTACAAAAAATTCTCGTACTAGCTGGGTGTCATAAGTTCCAACGCGCTGGGTAGGGATTTGCAAACCGTAGCTGAGATGGGGACGACCCGAAAAATCGAGTGCTACCTGAATTAAGGCTTCATCAAGAGGTGCAAGAAAGTTACCAAAGCGGACAATGCCTTTTTTGTCACCTAATGCTTTACTGATTGCTTGTCCTAAGGTAATGCCTACATCTTCGTTGGTGTGGTGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 1554-204 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000013.1 Fischerella sp. FACHB-380 contig13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1553 37 100.0 37 ..................................... TTTAGCGGAATAAAAATAAAGTTCATCGTAGAGAAAA 1479 37 100.0 37 ..................................... TCTTCTTATTAAGAAATGCTTGTAGAACAAGCTTTTG 1405 37 100.0 36 ..................................... TCTGCGAAGTTTCCAAAGCTGGGGCGCTAACTGATA 1332 37 100.0 35 ..................................... CAGTCAGGACTTATCATCATCAGGTAGCGGGTGCT 1260 37 100.0 36 ..................................... TAGGACGGCCGACTGGATAGCTGTATCGATAGCCTC 1187 37 100.0 35 ..................................... CATCCTTGTGCTTGAGCCGGCTCGCTATCCGGAAC 1115 37 100.0 36 ..................................... AATCCTATCCGCGTTAGGTTTTGGTTTTCGTGGCAT 1042 37 100.0 37 ..................................... GTGACGGGTTCGTATTAGCTTCGTGTCTTCGTATGTC 968 37 100.0 35 ..................................... CTCAGCAAGCACCTCTAACAGGTACTTGCATTTAA 896 37 100.0 36 ..................................... ATTCTTTAGAGTGAATCCCCAGCTTTGTTATCTGGA 823 37 100.0 34 ..................................... AGTGTGTATGCCGCGGACACTCCAGAATTTGGAC 752 37 100.0 33 ..................................... GTAGAACAAGCCACCAAATAGAGAGCCAAATAC 682 37 100.0 36 ..................................... TCTACATCCGTTCTCAGGACAAACCCGAAAGATAAT 609 37 100.0 36 ..................................... TCTGTCGGGAGTAGTGCAACGCGTGTTCAAACCTGT 536 37 100.0 36 ..................................... AATTAACCCTATCTTTTTAAAAGAATTGAGTTAATT 463 37 100.0 39 ..................................... ATCACAAACATTGACTGCTTTTCGTTGAACCAGCAAAGT 387 37 100.0 39 ..................................... TACTCGGTAAGCTGTGAACGGGTAAGGAACCATTTGATG 311 37 100.0 34 ..................................... TGTATTCAGTCCAAACCTCTTTGAAATCCGGCAA 240 37 91.9 0 .................................GTG. | ========== ====== ====== ====== ===================================== ======================================= ================== 19 37 99.6 36 GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Left flank : CCAATACTGATAGTCTTTTTATCTGCCACTACCACGGCCATCACTATCGATATTAGCAATATGCTGCCCAAACGCTGGAAATTTCATAAGATGCTCCCTAATGACCTATCTAATATCATCTACAAAAATGAGTGGGAATAACAGGATCACTGAGCTAGCATTTGGCATTTTGGCAGAAAATGAACTTACAGGCTTTTTTTGGTCAGATATTAATTAATGATCATCAATGGGAAATGTTGAGTTTCTGTAATTGCGCCAACCTGTAGGTGTTTTACACACAAAGGAAAATGTTATGCTTGAAAGCTTTGTCTGTTCTGGGTTTGAACCATTCACATCAAAACAGAGGTTCGCGCAATGTCTGAAACTTCTACCAGTAAAGCTTTTGAGCCGATTTTTTCCAAGCCACTCTTGACACTGCGATCGCTCAAACGCTATATTTATTCCAGGTCTGCACTACTGAACCTTGAAAACCAAATACAGCAAGGCTTCTAGATCAAACA # Right flank : CGACTATCAGTCGCTCACAAGAGTGAGTAACTTTGAACTACTCCAGGCTAATGTCTGAGCCTGTACCTGCCCGAAGGGGCATTGTGGGTAACTACGATGTCTCAGAGCTAGAGGGAAACGCGTAAAATCTACGAGCCGAAACGTGGACGCAGCGCTAAGGTAAAACCATTCATGGGTTAACGAGAGTGAACCTTTGACGAGGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 124262-118256 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000009.1 Fischerella sp. FACHB-380 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 124261 37 100.0 37 ..................................... GATTTCTATGTGGGAAAAAACTATTAATGCGGATTCC 124187 37 100.0 36 ..................................... TAAAAGGATTAGGATACCTTTGTGGTGGTTGTAAGA 124114 37 100.0 32 ..................................... AATCGTCTTTAGCCGCTGCGATCGCCCTTACT 124045 37 100.0 34 ..................................... GCTGCACAAAAACATAAAGATAAAGAAAGAATTA 123974 37 100.0 36 ..................................... ATACGGGCCTGGCTTTATGCCTCCAGCAAAACTTGA 123901 37 100.0 35 ..................................... AAGTCTTTTTTTAAATAATATGCTTATTGATGCTC 123829 37 100.0 34 ..................................... TTTCATAAAAGCAATAACTCTTCAATTGATTGCA 123758 37 100.0 36 ..................................... CGGCGATCGCCTAAATAAGAATCTAGAATTTTAAGC 123685 37 100.0 33 ..................................... TCTTTGGAAGCTTCTAGAATAATTTTTCTTTGA 123615 37 100.0 35 ..................................... CCTAGTACAGACATCCAAGGCATGAAAGTACGAAT 123543 37 100.0 32 ..................................... TCTCTCTTATTTTTAGAGAGAAACCCTTTGGC 123474 37 100.0 37 ..................................... GGTAAGTCTTAATATCTGGAAAAATAGGGACATTAGG 123400 37 100.0 36 ..................................... GGCAAATCGTGCTTAATTTAAGAGAAATTTTTTACC 123327 37 100.0 37 ..................................... TGGATACTTGCCAGATACGGGTGACATGGATATTGAA 123253 37 100.0 36 ..................................... AAAAAATAGCTGAGCAAGAATTGAAATTGCAGAATT 123180 37 100.0 37 ..................................... GATGAATCTGTTGCCACTGTCCTCCATCGGGTACTCC 123106 37 100.0 37 ..................................... TTCGCCTAGAGTCGTTCAAAGTGCTGCTGAGGGTTTG 123032 37 100.0 35 ..................................... TAATATTGCAGAGGTGCTTTTAAGCATATTATTTT 122960 37 100.0 35 ..................................... TCTGTGGTGATTGGTAGGATTCCACAGGGCTCTTT 122888 37 100.0 37 ..................................... CCACAAATACACTTATAACAACTTATTACCCTCTTAG 122814 37 100.0 36 ..................................... AAAAATGTTGTAATCTTCAAACATTTTGCGCTTCAA 122741 37 100.0 33 ..................................... GTAAATTTACCTGATAAAAATGGAGATACATCT 122671 37 100.0 35 ..................................... CAAATCCAAGACCAAGAATGTATAGGGAGCTTTGG 122599 37 100.0 36 ..................................... TACCTATGGAGCAAAGCAGGTCTTTTTCTTGCTGCC 122526 37 100.0 40 ..................................... TATTTCCATCAGAAAGTTTTAGAATTTCAAAGCTATAAAA 122449 37 100.0 33 ..................................... AACAGACGGCTAATCCAAAATTAATGGGGTGGT 122379 37 100.0 42 ..................................... CGGCTACCAGATGGTGAGCTGCTGACCGTAGCCAGTGGTCAG 122300 37 100.0 36 ..................................... CTGCATTTGGCGATTATTTCACGCCTGGGAATTTGG 122227 37 100.0 35 ..................................... TTACGCAACTCAAAAAAAGAGTGCGGCCATAGATA 122155 37 100.0 35 ..................................... GATACCCCCCTGGATAAACCCTAGGGACTTAGCTG 122083 37 100.0 35 ..................................... CGATGATACACCTCTGGTCTACGTGGTCAAAGGGC 122011 37 100.0 37 ..................................... TTAAGGTATCTAGCAGTTCCCTGACTGAGAGTAGAGA 121937 37 100.0 37 ..................................... GACCAAGAGAACCCCAAGGCGGTAATTGTATCCTTGA 121863 37 100.0 36 ..................................... TGGTGCAGATTTGCGGGATGCAAACCTCTATGGCGC 121790 37 100.0 36 ..................................... GGATGCGGGAGGAATCCAAGTGGATGCCCTGATCAA 121717 37 100.0 34 ..................................... ATTGTAACGCCAAACGATGGCGGCAATGGCGGAA 121646 37 100.0 34 ..................................... CAAGGGAGTCCTCTAAGGATCCCTAGGTATTTAT 121575 37 100.0 35 ..................................... AAAATTTTGCATAATAAATTCTGGGTGATTTTAAA 121503 37 100.0 36 ..................................... AAAAACAGTTAGAAGCATGCTAACTTGGGCGCATTA 121430 37 100.0 35 ..................................... CGGGGAGGAAACGGAGGAAATGCCTTTATCTTTCC 121358 37 100.0 37 ..................................... GAGACTCCGAAGTCCACGTGCCGGATATACGGCTGGA 121284 37 100.0 37 ..................................... GCCCGGAACAACAGCAAACTTGTAAGGATCCTCTCAA 121210 37 100.0 34 ..................................... ACCACCAGGAGTAAATGAGGTCACTTTATATCCT 121139 37 100.0 35 ..................................... ACCGTTCCTAGGGAACCCCGCCTGAGCCTGGGCCA 121067 37 100.0 36 ..................................... CACAACTTTAGCGGATTATAAAGAAACAAAAGAAAC 120994 37 100.0 34 ..................................... AAATGGCACCCAAGGAAAAGAATTTATAAATTGC 120923 37 100.0 35 ..................................... CGGCCTGGGATGGCCAACTGGATGCCCCAAGTCGT 120851 37 100.0 38 ..................................... AAATAATTCTTTCTCAAATCCTTCCTTCTTGCCCGCAT 120776 37 100.0 36 ..................................... AATTAATTCGGATTTTTTCGGATAAGAATTTTTTGG 120703 37 100.0 35 ..................................... AAAAAAGCTATCAGCAAATGCTCTTTGGGAATATG 120631 37 100.0 32 ..................................... TCTAGGGTTGCTGTGGGAGTTGCTGTCACGGA 120562 37 100.0 34 ..................................... TGGCAAGACTTACAGCTTTTTTTAGTCTAAAAAC 120491 37 100.0 36 ..................................... CCGGGGGCAGCTAGCGGCACTGGTGACATCTCATAT 120418 37 100.0 34 ..................................... TTGATCAACAAAATCTCTTTAGAGCGCAATCAGC 120347 37 100.0 35 ..................................... GGGACAAGAGCATCAGGATTATCCTTGTATAAAAG 120275 37 100.0 35 ..................................... ACTCCTTGGGATATGCTAGGTATTTATACTCAGAC 120203 37 100.0 35 ..................................... AGGGCGTCCTTAGGCACTCCCCAGGGCTCCCTAGG 120131 37 100.0 34 ..................................... AGGACTTGGAGCGGTCATAAGCCTTCCATGAATA 120060 37 100.0 38 ..................................... GATCTCTATGTGGGAAAAAACTATTAATGCGGATTCCC 119985 37 100.0 35 ..................................... CACTGCTTCAGCATCGCCGCGATAGTACACGGTGG 119913 37 100.0 34 ..................................... CGGAATGGTACGCCCTTTGGCGTAAAAATCACCA 119842 37 100.0 34 ..................................... GCTTCTCAAACTGAGCGCGATCGTACTCAAGTAA 119771 37 100.0 38 ..................................... TCCCTCGGGAGGCTGGCACTTACCGACAACAAAGTTGG 119696 37 100.0 35 ..................................... AGAGCGGGCCAGCTGGATAAGCTACAGGTTGACAC 119624 37 100.0 40 ..................................... ATTGAATTGTTGTCTTTGCGAAGCGTGCATTCTTTGCAAA 119547 37 100.0 41 ..................................... GTTTTTAATTTAATTAATTATGGAATATAAATCTAAAAGAA 119469 37 100.0 34 ..................................... TTCCCTCTTGTTTCTTGGGTAAGGCAACCAATAG 119398 37 100.0 37 ..................................... TGCAAAGTAAGCTTTGGCTTGATTTAAATCCTCAAAA 119324 37 100.0 35 ..................................... ACCCAGGACAGGATCTCGCTAGGGGTGACAGAGCG 119252 37 100.0 40 ..................................... TTTATGATGATTGGACACCATCACTAGATTCTTTGCTGGT 119175 37 100.0 35 ..................................... TGAATGCAACCATGCAGGTGGCCGCCATCCCCAAT 119103 37 100.0 42 ..................................... CGCACGACTTAAATTGGCGCCAATTAGATAGGCATCAATCAA 119024 37 100.0 41 ..................................... TCTTACTTTAATGGCTTTCATTGCCACCCATCCCTGGGAAT 118946 37 100.0 36 ..................................... GACGGATTCTATTACTTAGCTTCTGACTCTGGTTGC 118873 37 100.0 35 ..................................... GCCCTCTACTGCAACCTTGCATTGCTTGAGGTAGA 118801 37 100.0 34 ..................................... GCCACAGTTGTGGGTAATATCTTTTCAATTCCGC 118730 37 100.0 36 ..................................... ATCAGATTATATCTGAATACACAGATAGATTTAGAG 118657 37 100.0 35 ..................................... AATCCTGGTGAAGAAGAATCTGGCAATGCCGGCGG 118585 37 100.0 37 ..................................... GAGAAGCAAGGCTTCCGCTCTTTGCGGAGCCTTGTCG 118511 37 100.0 37 ..................................... TTCCGCCTACAGCTACAGCAGTTATTACAGCACTTAA 118437 37 100.0 37 ..................................... CAACAGTACGCTAACAAGTACGGCTTAAATCCTGGTT 118363 37 91.9 34 .........A...TT...................... GCGAGACATCGCAAGGCTTCAAACCACAGGCTTG 118292 37 91.9 0 .........A...TT...................... | ========== ====== ====== ====== ===================================== ========================================== ================== 83 37 99.8 36 GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Left flank : CCCGAAGATAAACGTCGTACCAAAATCCACAATATTCTCAAGTCTTACGGACAGTGGATGCAGTATTCTGTGTTTGAGTGCAACTTAACTGAAACCCAGTATGCTAAACTGAGGGCGCGTTTGGCAAAACTCATTAAACCTGATGAAGACAGCATCCGCTTCTATTTTCTTTGTGCTTGCTGTCAGGGTAAAATTGAGCGCATTGGTGGTGAAATGCCAATGGATACTACGGTGTTTTTTGCTTGATGATGGTGCAAATCAGTAGGTGTAGAAAAAAAGCAGTCAATTTTTGGGGCTGAAATACTGATCCTGTCTAAGTTAGAGGCTGAATAGATGCTAAATGGGATCTGCACCTTTTCTGTAATTATTGCCCTGACTACATTTGAGCCATTTTATACTCATTTGCTCTTGACAGTGCGATCGCTCAAACGCTATATTTACTCCAGGTCTGCACCACTGAACCTTGAAAATCAAATACAGCAAGGCTTCCAAATTGAGCA # Right flank : ATTTAATCCTTTAATAGTCATCCAAATATAGTACTTATATACTATGTGCTAAAACCAACTTGATTTTAAATCCCCATTCTTTCAACTGTTGAAGAATCTCTACTGTGTTCACTGCCTGTCTGCGTGGTGTAACAATCCTTATTACTTAACTATACTTAACTTATGGCTTTCTTCCTGATTATACTTTGCCGATAGTCACAAAAGGCGATAAGAGGTTTCATAGAATTTTGATATTAATAAATTTGCTTGAATCTTAGGAATTTGTGATAAACTAAGAAAAGAAGTTTAAATTCGGTTGTGCGGTTTGTTTTTATTTGTACTTAGTATTACAGACTTCTCCGGATCTAAAACTCTACGCCATTTGATTCTGGAGATGTTTTATGTCGATTTACGTTGGTAATCTGTCCTATGAGGTTGAGCAAGATGACCTCAAGCAGGTATTTTCCGAGTATGGAACTGTGAAGAGCGTTCAACTACCTGTAGACCGGGAAACTGGTCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTACACAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 12538-17610 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000026.1 Fischerella sp. FACHB-380 contig26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 12538 37 100.0 33 ..................................... TGGCAGTTTCGGATAAGGTGAGAAGCGTCGGGA 12608 37 100.0 36 ..................................... AGCAAATGCGCGAGTGGGGAATAAGGGGAGGACACA 12681 37 100.0 34 ..................................... TGCGTAAGCCACTGAAGGAATCGTGGTGCCTAAA 12752 37 100.0 35 ..................................... GGCAGCCCTGTAGAACTCACAAATCAAGTTTGCAA 12824 37 100.0 39 ..................................... GTACAAAATCTGGAATAATTCAAGTAATTTGCCGATTGC 12900 37 100.0 34 ..................................... AAGGACTTATAAGCTATTTTAGCTTTAAAATTCT 12971 37 100.0 37 ..................................... AATTTTTTATGAACGGAGGGGCAGTTGATTCAAAAAA 13045 37 100.0 34 ..................................... AATTAGCTTATACAGCTAAAATCAAGCTTTTAAA 13116 37 100.0 41 ..................................... CAATCATCATAAACCGCGATCGCGCTTCCCATGTGAGCAGT 13194 37 100.0 42 ..................................... TCTTCTAGAGATTCAATAAAAGATTCTGGAATTTCAGCTGAA 13273 37 100.0 34 ..................................... AGTCTTGGTGTCCATTGTCCCTTCTAATGGAATA 13344 37 100.0 37 ..................................... GTTTGATCAACCGTGATATACTCGCTCCATGATTTGA 13418 37 100.0 36 ..................................... TGATAAGATTTAAATTGGAATATCCCCTATATTTAC 13491 37 100.0 40 ..................................... CTTTTTCTAAACGCTTATTAACAGATCCTAGAAAAGCTAA 13568 37 100.0 35 ..................................... CGGTACGAGATCTCCGATAAGGCTCTAGATACGGA 13640 37 100.0 36 ..................................... GGCTGTCCTGGATTCCATGGCGCAACAGGTTGGAGA 13713 37 100.0 35 ..................................... TTGCGGATCCGCTCCAAATACTTCCCCTACAGCGT 13785 37 100.0 35 ..................................... GCGGAAGTGTTGTGCGCGGTGTAGTGCTGCTGGAT 13857 37 100.0 35 ..................................... GATTGTGTAAGAGTCCAAATTCCCAGGCGTGAAAT 13929 37 100.0 35 ..................................... GCTTCAAGCCGTGGCGATCGCAATAATCCCAAACT 14001 37 100.0 35 ..................................... GCCTTATTATCTTGTTGATGACGAAATTCAAGCTT 14073 37 100.0 40 ..................................... CAATTGGGTTTGAAGCTGGCCAACTCCTTAGGCATTCGAG 14150 37 100.0 37 ..................................... TTCACCAGCCGAGAACCGATCCCTTGGCCTCGGTAAT 14224 37 100.0 36 ..................................... TGGATGATCCTCCACCCTTCTATAGCGCAATTATCA 14297 37 100.0 34 ..................................... AGGCTTTTCCCACTACCAGTTGGCATAGCCAAAA 14368 37 100.0 37 ..................................... ATCTGGCACAAATGTTTCAACCTCCGACTCTTGATAA 14442 37 100.0 34 ..................................... CCACATAGAGGCGGCGCTAATGGAGATCCGACGG 14513 37 100.0 41 ..................................... GTTGCTTAAGGGCATCGATGAATTGGGGGTTCTTCTGGAGT 14591 37 100.0 35 ..................................... CCTAGCATCCCGAGCCTCCTCCAAAAGGGTGCGGA 14663 37 100.0 38 ..................................... AAACTAGGGAGGTTACATGACCTACACTTTCTACGATA 14738 37 100.0 35 ..................................... CCATTTTTTCCAATTTGCTTTTATTCCTGTCCAGG 14810 37 100.0 33 ..................................... GCTATTTGGCGCGAATTAGCTGCTTAATATCAA 14880 37 100.0 38 ..................................... ATCTAAATCGTAGTCCACATCAAACCCAGAAAACTTTA 14955 37 100.0 34 ..................................... CCTGATAATGCGGTCAAATTTGAACAATCCTTCA 15026 37 100.0 34 ..................................... CAAAAGCATCCCTTTACCAGATCCAGGAAGACCC 15097 37 100.0 34 ..................................... ATTACAAAGTTATTACAAAGTTATTACACGGATT 15168 37 100.0 34 ..................................... GAGTTACAGCCGCTTGCAAGACCAGAACTGTTTG 15239 37 100.0 36 ..................................... TTGCAAATAATCCTCTAGTGTGCTACTGATTTCAGC 15312 37 100.0 37 ..................................... TAAAAGCGCTAGTTTCATTTATTTGGTCTCCTTTGTT 15386 37 100.0 33 ..................................... TACTTAATCGGTGCGATCGCATTTGATTGGAAC 15456 37 100.0 35 ..................................... TCGACCCCCACGGGTTCGGTTTGGGTCTCATCTCT 15528 37 100.0 38 ..................................... CGTAGCGGTAGAAGCCGCGAGTACGGGATCGGACATGA 15603 37 100.0 35 ..................................... GACCTTGATAGGTTTCTTGAACTCATCCCTTTGGA 15675 37 100.0 32 ..................................... CAGGATCGTGCGGACTGTGCAGAATCTATACA 15744 37 100.0 38 ..................................... ATAAAAGGCAGTCTTAGCAATACCTAATTCTTTGCAAA 15819 37 100.0 35 ..................................... TTTCTCCAGCAGACTTTCCCGCCTGCCTTTGGACG 15891 37 100.0 35 ..................................... AATTCTGTGTGGGCGCTTTTTGTCGTGAAAATAAT 15963 37 100.0 36 ..................................... GCTCCCCTTGGTTTCCCCCCCTTACTCTCCAAGAGG 16036 37 100.0 32 ..................................... CCATACTCCTTACTCGAGACTAAGGTTAAGTA 16105 37 100.0 34 ..................................... AAATGCTTGCCAGATGCTCTTCCAGGCCTTTAGG 16176 37 100.0 36 ..................................... AGATTGTTAGGAGTGCCAAAGAGGTCAAATACGTCC 16249 37 100.0 39 ..................................... ATTATAAACAACGGTTGTTGCAGACTCATATTGCAGGCG 16325 37 100.0 41 ..................................... GAGCAGCGCTTATTGCGTTTAGCGTTTTTCCACCTGCTATG 16403 37 100.0 34 ..................................... CAAGAAGATCCAGAAAATCGCCAAAAGGATGTAC 16474 37 100.0 34 ..................................... ATCGTATTTGGAGGCTTCTTCTTGCTCGATCTTG 16545 37 100.0 37 ..................................... TGGAGATCGCTTCCAGACTTGCAGACAAAACATTTAA 16619 37 100.0 36 ..................................... CGGTCTTGGTGGCAGCAGCTTCCTAGCATTCTTGGC 16692 37 100.0 35 ..................................... ACTTGCAGGCGATGCCAACACCAAATCAGGTGTAG 16764 37 100.0 42 ..................................... ATTGACGCATGGGAGGGTAAAATACAGGGGAGCTTGCGCAAA 16843 37 100.0 33 ..................................... GCAAGCAAGTCCATCCACCCCATAAAAGCTAGC 16913 37 100.0 35 ..................................... TTGTGCGATCGCAATACCGACTACTCCAGCAGCAG 16985 37 100.0 35 ..................................... GCCTTCAATTGGTGGAAACAAAACAGAATGCCGTG 17057 37 100.0 35 ..................................... GCGATCGTGCAAATCCCATCGCTTTCTAAATCTAT 17129 37 100.0 40 ..................................... ACTACACCCTATTCTTGGAGAGGAAAAACTTATCAGTACG 17206 37 100.0 37 ..................................... TTACGGATTTCTTTCTCTTGACTTTACCTTTGCCGTG 17280 37 100.0 35 ..................................... GCTTAATGCAGAATTATTACCTCTTTGAAGAGTTG 17352 37 100.0 41 ..................................... TCCTTGTTCCAGGATCGACACGGGGTTAGCTGGCTCTCCGA 17430 37 100.0 35 ..................................... TCCCTTAGGCCCTACAGGATATCTAGTTGTCTAGA 17502 37 100.0 35 ..................................... TTCAAGAACAACACGGAAGATATAGGGAATATATC 17574 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 70 37 100.0 36 GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Left flank : GGTGGTGTGGAAGCGACACCAAAAGTTTGGGATATAGCCGCCGCTTGGGTAATAGTCAAAGCTGCGGGAGGAAGTTGGATCTCACTCAAATCAGAACCTTTTCCTTTGTCTGCTGGCGTTGATTATAGCGATCGCTCTTTCCCCACTTTGGTTGTCAGTCGTCCAGAATTGGTGTCTACATTTAAGCCATGTTTGGAAGAGTTGAAGATTTGAACTTTGGCACTCTCCAAGTTGCTCGATTGACTTTATGGTGCAGATGGGTAGGTGTAAAAATCAGCTAGTCTATAAAAAGTACCTTAATCCGTTTGACAGCAATAGTTTCATCGATTAAGTACCGAAGATAGGTCTGCACCAGTAGTAAAAAGCTTACTATACAAAGCTTTCAGGCTTAAATTTTGAGAGACTTTCTTGTTACCTAATAGCTGAAATGATATTATGATGACAGGTTTGCACCACTGTACCTTGAAAACTAAATACTGTAAGGGTTTGAGTCCATAGCA # Right flank : CCCAGCTAATTTTGCTGATGCTTTGGGCTGAGTTCCGAGTGGAAATGACTTAAAATTCCCTGAAATAGATACATCAGAAGAAGATGAAAATTAACTGTGGGTGATTCTTCCTTAGATTGCTGAAAGATGTTAGTTAAAAGGGGTTAACATTCTTATCTTAAGTTAGCTATAAGCTAACTTTACCTTTGAGCGCAAAATTTATTTCAGCGCTTAACAAGTCTGTCATTCGGTTAGATTGAAAGCGAATGAAATTAACCTAACCTTGCAATATAAAACCACACTGTTGTAGCAATGTGGTGAGATTTACGTATAGCACTTTAAAGTTAGGAGATTTAATTCATAATCACCATCGAGTGGTGTTATTGTAAGCTACAAAGTCGAAGTTCAGCATTCCGGACGAAACACAAACATTTTTTGGACAACAACCTTAAGAAAAAATGATGTCGCAAAAAAATCCCTGGACTATAGTCTTAGTCGTGATCGTGTCAATTGCTGCCACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 60720-65558 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000036.1 Fischerella sp. FACHB-380 contig36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 60720 37 100.0 34 ..................................... GTACAAAAGTACGTTGTACGCCAGGCCCACAAAA 60791 37 100.0 34 ..................................... ACTGTGCGATCGCCTCCAGGAATTAGTCCCGGAT 60862 37 100.0 33 ..................................... AAGTCTTTTTTTAAATAATATGCTTATTGATGC 60932 37 100.0 35 ..................................... CGCTATTATATTTTAAAAGGCAAAGACGGAAGTGT 61004 37 100.0 37 ..................................... TTTTCCAAAAAATTTTAAAAGCTCAGCCAGATATTTT 61078 37 100.0 35 ..................................... AGTGTTATAAAAATCAAAATATCACAGAATTACTG 61150 37 100.0 36 ..................................... CCCGCTATTGGCGATGTCGTGCCATTAATTTATTGC 61223 37 100.0 33 ..................................... CTTATTACAAGTGCTTGCCGAGAATCCAGAAAA 61293 37 100.0 39 ..................................... GCAAACTGATCACTTTGATAATATTTTTGATCTTTCAGA 61369 37 100.0 35 ..................................... GCAAGCGGTAAGAGTCCACGTAAAGCATCCAAAGC 61441 37 100.0 35 ..................................... CGTATTCTCTTTTAAGCTTGTGTAAATTTGCACAT 61513 37 100.0 35 ..................................... CAGCAAATTAATAATTCTGCTGGTTTTCCAGAAAT 61585 37 100.0 34 ..................................... TTTTTAGTGGGAGAAAAAGAAATTTCTCCTCATC 61656 37 100.0 33 ..................................... GCTCGCACTAATTGCGATCTAATTCACGATAAA 61726 37 100.0 34 ..................................... GAATGATTTTTGTTAATTCACTCGTCCGCATGTG 61797 37 100.0 37 ..................................... TATCTTTTGGACTTCCTCAGGGAACCAATCCAACTGA 61871 37 100.0 34 ..................................... TTTATTGAAAATACCTTTTGGAGGTTAAAAGCCT 61942 37 100.0 39 ..................................... TATTGTGTAAGAGTCCAAATTCCCAGGCGTGAAATAATC 62018 37 100.0 40 ..................................... TTTGGTATTTGCCTTGTATTAGCTGTACCAATAATTTCAG 62095 37 100.0 35 ..................................... CTTTTTACCCAGTATCAGAAATTATACGGAATCAA 62167 37 100.0 37 ..................................... GACGAACCGATTATTAGGCCAATTAAGAATGACTTAG 62241 37 100.0 36 ..................................... GACTTCTCCTCCCGCTAGAAGCAGGAGGATTCTAAA 62314 37 100.0 34 ..................................... TGTTTGGTGGATAGATAAAAACGGATGGGCTAAG 62385 37 100.0 37 ..................................... AAGCCCTTCTTGCCAGAAAAAGCGAAATGCTGGAGAA 62459 37 100.0 41 ..................................... GAACAACTGGTAATTAACAAAGCACCAACATTTCCAGATAA 62537 37 100.0 34 ..................................... CGAATACAAGATCTTCGTAATAAAGCGTTTTGGC 62608 37 100.0 33 ..................................... TTATGAAGTGCGCCACAGCATCTTAAGATTAGC 62678 37 100.0 35 ..................................... GGAGTGCCTTGGCAATTATCTCTGCTGCTGCTTGG 62750 37 100.0 39 ..................................... AATTTCTTCCAGTTTCCATTGAACTTTTGTGATTACTTC 62826 37 100.0 36 ..................................... CCAAGATCCTGAATATGATGGATCTTTGGAGTTGCC 62899 37 100.0 35 ..................................... GCTAACAACTCCTTGTACTCAGGATGCAGCAGATT 62971 37 100.0 32 ..................................... ATCATAGTGCTCATAATGAAATTGATATTCTT 63040 37 100.0 34 ..................................... AAACGCTTTCTCTAAACCACTGTAAGCGTGACAA 63111 37 100.0 33 ..................................... GACTGTTTTAGGTAATTTGGATTCAGCTAGTAA 63181 37 97.3 40 ...A................................. GATAGCGACTAAAGCCTCCCCTGATGCAGATATCAGCAGA 63258 37 97.3 38 ...A................................. TAATTCCCAACTCAGTAGGTCGGAGGGTTTGGGCTGTA 63333 37 97.3 37 ...A................................. GGCAAACCTCTATTCTCAGGCAGCAGCTAGGTTTGGC 63407 37 97.3 35 ...A................................. GGGATCTCCACTGCCAGGCCCAGTAATTTCCCGCA 63479 37 97.3 40 ...A................................. GGGTGGCATCCGACTTAGCCCCTTGGTTATCTGCCTCATG 63556 37 97.3 37 ...A................................. GCTCAATGAGTTTTTCAGCATTTTCACCACCACCAAA 63630 37 97.3 37 ...A................................. TCTTGAACGGAGAAAATATTCAAAACTTGCAGTTCTC 63704 37 97.3 34 ...A................................. GATTATTTTCACGACAACAGCACCTTACACAAAA 63775 37 97.3 42 ...A................................. GTTGCTTGCGCTGTTTCTCACCTTCCTTAATTTGATTGATAA 63854 37 97.3 39 ...A................................. ACCAGGGGGCGGGACTACGATAGATTCGGTGGTCTGGGC 63930 37 97.3 33 ...A................................. TTTCGATGGCTACGACGTGCCAGATCTCCTTAA 64000 37 97.3 36 ...A................................. GGAAGAGGGAACTTCCAGCGCGCGGGCTTCCCGCCT 64073 37 97.3 38 ...A................................. TTTATGAACTACCCCTGGCGAGGGCGAAGTAGCCTTTA 64148 37 97.3 38 ...A................................. ATTAGTTATCGCCCGAATCGTTGGAAGACGGAACTTCC 64223 37 97.3 35 ...A................................. TGTGTGGGATTGTGACTTTTCTGCCACTGCCTCTT 64295 37 97.3 36 ...A................................. AAATCTGACACCGCATTAACCAAACGCACTAAAGGG 64368 37 97.3 35 ...A................................. TTCCTAAAATTCTCGCCATGAAGCTTTGTAACCAA 64440 37 97.3 34 ...A................................. GGCTACCCCCAATCGAGTCAAATAAGGCTTGGTA 64511 37 97.3 34 ...A................................. TCTAGGAGTAGCTGCATTTCTCCCACCCCTACCA 64582 37 97.3 36 ...A................................. CAGTATCGCCTTCTCTCTATCATCTTGAGTAATTGT 64655 37 97.3 35 ...A................................. ATTGCCTTTACAATTCACCTCCATCGAGCCATACA 64727 37 97.3 37 ...A................................. CCTCTGGCGCCTATTCATCACCCATCGGATCCCCTGT 64801 37 100.0 35 ..................................... ACTGTCTGGCGTCTGGGCCGGACATGACGCGTATG 64873 37 100.0 37 ..................................... GCTATATGCCTCTTTAGCTTTCTCCCAGACGTGTGGG 64947 37 100.0 32 ..................................... CCTTTGAGCTTTGTTTCAATAATGCCCATAGC 65016 37 100.0 37 ..................................... TCACTGACCACTTCATGCAAGATTTCTTTAAGTCGAG 65090 37 100.0 37 ..................................... CCAGCCTTGAATCATGTACAAAAAGCAGATGTATTTA 65164 37 100.0 33 ..................................... TGCTTCAAACTTCAACACCGAGTACCTCAACTC 65234 37 100.0 36 ..................................... CGCTGACACAGCAGGTAGCAAGGAGGCTACTGTTAA 65307 37 100.0 34 ..................................... CAATTCCGCCAATATCACAAGTTGGGTGAGGATG 65378 37 100.0 33 ..................................... AGGTGGAAAATCTTAAGATTACTGCTCACATGG 65448 37 100.0 37 ..................................... AACTCAATTGCCCTAATCAAATCGTTGGGGCGATCGC 65522 37 97.3 0 ...A................................. | ========== ====== ====== ====== ===================================== ========================================== ================== 67 37 99.1 36 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : CGCTGTGCAAACTCTTTTAGCAAACGGGACATTATAAATTTACTCCTCAATCAATGCACTTTCCTTATTTTCGGTTATTTCGGGAGCATCCCAATTTTTAAAAGTTAGCTGGCGAATATAATTCACTGCTACACAAACAAAGCTCCAAAGTTCTGATCCGAGGAAGCCTCCGCTCAGACTTCTCTGTGCCCACGCAGGCTACAATTAGTCTGCCTACAATAAGTAGCATCACCTGCAAAAAAATACAATTTGCGCAAATGAGTAGGTGTTTTTGTGAACATGTCAAAAATATGGGCTGAAACCATTACTCTGACTGCTTTTGAACCATATTGTAGCGATAGGGAGGTTTGCGGCATCGCCAAAAAGTTTGCTATGACTAAATTTGAAGGATTTTTGCTCAAACATCACTTGACATCCCAACGGCTGAAAAGCTATATTTCCTCTAGGTCTGCACCACTGAACCTTGAAAATCAAATACAGCAAGCCTTTCAAAACGAGCG # Right flank : AACCGACACGTGACCCATAACCCTATATAACCCTCTTTTGTCACTATTATGAGAGAATAATTGGGTAAAAACGATGAAAGCATTACAGGGATAATGTTTGAGTCTCGGCCAGCAGCGCCAACAGTAAAATT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : GTTACAACTTCAATTAATCCCTATTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 112-371 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000107.1 Fischerella sp. FACHB-380 contig107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 112 37 100.0 36 ..................................... GCGTTGACGGCGCGCGAGGCATAGACCGTCACGTGC 185 37 100.0 38 ..................................... TTCAATAAAAAATTGCCAGCTGATGCCAGTGCAGAGTT 260 37 97.3 38 ...G................................. GACGAGAAATTTTGCTCATAATATCCGCTGCATCGTCA 335 37 89.2 0 ...G......A............C...T......... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 96.6 38 GTTACAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : CTAAACTTCAGTCTATCGTTTATAACCTCACAAGTTCAATTTTTATTTTCCTGACTCATCCTGATTTCTACTTTTCCTCTGCCTAGAGTGACAAAAGAGGGATAAAGTCGGG # Right flank : CTTAATTGCAAGAAGTTTGAGATATAGCATTCCTAAATCATTCGCCAGAGACAAGAACCCCGACTTTTTGGAAAAGTCGGGGTTCTGGGCTTTGCGATTCTCACAGAATGATATAGAAGTGCCATAGATAAACCAGAAGCGATCGCCCCATCGCCCCTGCTAACCACTAACAACCAACAAACATGCTGTCGTAAGGAACGTAAAAGCTGTCTTGACAAAGCGATCGCTTCAAAAGAGGAAGATATACACAATCTGATGCTTAGCAAAAGGTGGGTAGTATTTTAGGTTGTGGGCGACTGTTGAGTAGGATTTGTATAGGCGATCGCTAAACTTTTCGGAGAGGGCGTCGATGGGCTTGTAGGTTGAAAATAGTTGTTTATTTCTAAAATTTTTAGTTTAAATCACGCACCTCTTCTAGAAATCAAGATGACAAATCGAGTAATTTTCATTGGATTATCACTATTTGTATACGGAATAGCGCTTAGCTTGCCAGCCCTTGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 20866-26179 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRZ010000065.1 Fischerella sp. FACHB-380 contig65, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 20866 37 100.0 34 ..................................... TTTTTGAAAGCCTTACCAGCTAAGGCTTTTGGAG 20937 37 100.0 36 ..................................... TACCGCTTTCGAAAAGAATTGGGAGATATTTTTCCT 21010 37 100.0 35 ..................................... CCATTGTAGGTTAGCTATGCTTAAAGGCTTTATTA 21082 37 100.0 37 ..................................... TCCACCACGGGTGAAACAGGGGCTTCGGGTTGGTAAA 21156 37 100.0 36 ..................................... GTAAAGGTATCAATATTTTTTGGATCTTGTAAATTC 21229 37 100.0 37 ..................................... TTTTTCTCTTTTGCGCCACCAGAACTACTATCGTTGC 21303 37 100.0 34 ..................................... GAATAGTTTTTTAATTCAAGAGTTAGGATGCCAT 21374 37 100.0 34 ..................................... CTAGAGTACTACGCGATAGATATTACTAGCCGAT 21445 37 100.0 37 ..................................... TGCCTAAAAGATTTCGATTTCAATTTAACTTAAAAAG 21519 37 100.0 37 ..................................... GCGACATAGGAGATGAGATCCAACCCAAAGCCATGGG 21593 37 100.0 38 ..................................... TTAATCATCCATAAGTAGGTATCTGCAATATCTTTAAA 21668 37 100.0 34 ..................................... TGGGAACATTGGGCTGATTATTGGAAGTGGCACA 21739 37 100.0 32 ..................................... GTCCTTGTATAAAAGAACACCCTGGCGTACGT 21808 37 100.0 35 ..................................... GAAAACAATTAAATCGAATTTTGGTAATAGATTTA 21880 37 100.0 35 ..................................... CCCTTCATCCTTAGTGATCGCCTGAAAAATTCTTT 21952 37 100.0 36 ..................................... GATGACGAAATTCAAGCATCACCTTACAAACAATTA 22025 37 100.0 35 ..................................... CCGATGGGTGGCCCGTTGCGTACAGAATAGCGATC 22097 37 100.0 36 ..................................... ACCGGCGACAACCGTAAGGGCCGCTTCATCGATGAG 22170 37 100.0 34 ..................................... TGCAATCCCGATTCTCCTGGTGGAATTCCATTAA 22241 37 100.0 35 ..................................... CTTCTATTGTGGATTTACCTTCAACTATAAATATC 22313 37 100.0 39 ..................................... ATGCAGGGGGCTGGCACGGGTGCGGTGCTTGAAAATCGC 22389 37 100.0 34 ..................................... CCACATCGAGGCGGCGCTAATGGAGATCCGAAGG 22460 37 100.0 35 ..................................... CTACAAGCATTTCTTGATAGAAAGATACATAAAAA 22532 37 100.0 36 ..................................... ACTTCATTTACCCCTGGTGGTGACCCATTTGTATAA 22605 37 100.0 38 ..................................... CTACCTACCCAAACTGGGAGACTGTGCCCCCTTTGGAA 22680 37 100.0 34 ..................................... CAGGTACTGGAGCCCGAGAAAGGCAGCGGCAACA 22751 37 100.0 37 ..................................... GGATGGAAGCAAGGGATAATCTATCTGTTAAGAGACA 22825 37 100.0 36 ..................................... AAATTATTACACCCTTGCTTGGCTGGATCGCTGGCT 22898 37 100.0 37 ..................................... AAGCGCTTGCACATTTGCATCATCATGAATACTTGAT 22972 37 100.0 33 ..................................... GCCCACGTAGGCGACATAGGCGATAAGGTCGAC 23042 37 100.0 32 ..................................... TAAGTGCTGCTAGAAACACGCAGACTATTCAA 23111 37 100.0 34 ..................................... TCATTAAATCCGATTGCCAACTTCTGGCGGCGCG 23182 37 100.0 36 ..................................... TCTTTTAATTATTATTACGAGCTTATTTGTAATAAA 23255 37 100.0 37 ..................................... AACTACTTTATCTACGTTTGTGATCAATCCATCTATA 23329 37 100.0 36 ..................................... ATCGCAATATTTCTCTGGAGAAGGCGCGATTCAATG 23402 37 100.0 35 ..................................... GGCAATAACGAAATCAGCAAGAGACGACGGACGCG 23474 37 100.0 38 ..................................... AAAATATCTTTGGAAAACATAAATCAGGAAAAGATTAT 23549 37 100.0 35 ..................................... TTTGGTATTTGTCTTGTATTAGCTGTACCAATAAT 23621 37 100.0 32 ..................................... TTTCACCACAAACCTAGCTTGGAAGAGATTGA 23690 37 100.0 35 ..................................... AATAAATCAGTTCCATCAGGCTCTGATGGAATTTG 23762 37 100.0 38 ..................................... CTTGCATTCATGGTAGTTTGTAGAAGCTTCATGATGAA 23837 37 100.0 39 ..................................... TCAAAGCTTGTATTATTTATTTCAAATCCCAATCCATTT 23913 37 100.0 34 ..................................... AATTTATTTGGAGGATCAGCAATACCTCCAAAGC 23984 37 100.0 35 ..................................... AAGATGCAACAACTAACAGATTACAAGAGCAATTA 24056 37 100.0 35 ..................................... GTAACGATCGTGGTTGCAACCACCCCAGTGGTTGC 24128 37 100.0 36 ..................................... AATTTGATCGTCGTATTTGGAGGCTTCTTCTTGAGT 24201 37 100.0 36 ..................................... CTTCGAGATCTTCTATCTCAATCAATACTGCTTCGA 24274 37 100.0 37 ..................................... TACGGCGAAATTCAATTTCGCGTAAACGGGGATTTAG 24348 37 100.0 38 ..................................... AAATGGATCAACTAATCCTGCTTCACACAATTTTTTTA 24423 37 100.0 35 ..................................... CATCTTCAACAACTTCTTCAACCGCAACCTCTTTC 24495 37 100.0 34 ..................................... AAAGTGGTTGCCCTCATACTTCCAGAATTTTGCT 24566 37 100.0 40 ..................................... CTATTTCCCCTCTGGATTTATAGGGGAATTTTTGCTTCAA 24643 37 100.0 34 ..................................... GGTTTACCCTGGCGATATTGGGCATACGCAATTT 24714 37 100.0 31 ..................................... ATCAAATCCTTGAAGGTGCAGTGGAAGTAGA 24782 37 100.0 36 ..................................... CTCTTGTGGAAGGTATGGCAGATTATATAGGAATGC 24855 37 100.0 35 ..................................... TTACCCCGAACGACATGAAAGAGCCCTAACCAAAC 24927 37 100.0 33 ..................................... TACAGTTTTTCGCTCTGCAATATTTGCAGATGG 24997 37 100.0 34 ..................................... ACTTTATCTACAGGTCAAGTTTTGGATGGTTTAA 25068 37 100.0 37 ..................................... AAGCGATCTCCTTGATATCAAGGAGAAAATTGATTGG 25142 37 100.0 35 ..................................... TTGGCGTCGCCAACTTCAATCCAACGTTGTAATGT 25214 37 100.0 36 ..................................... GTAGTCTAGGTACGAGGAATCTATGGAGATCCAAGA 25287 37 100.0 34 ..................................... TCGATTAGGGATGCGATTGCCTGTCGTGAAACAA 25358 37 100.0 36 ..................................... ACTCCAATTACTTATCACGTGTACACGTAATAACAA 25431 37 100.0 34 ..................................... AAGACTCATGGACGTGCTATTACGAAAGCATGGC 25502 37 100.0 35 ..................................... GGTGGCAAGACCGTGGCGTGTTTGTGTCGATGACT 25574 37 100.0 34 ..................................... AGCAGCCCCACCGGGGTTACGCTTGATTGTTGTT 25645 37 100.0 33 ..................................... TGGACAGTTTGAGTCCAATCGGCAAGTGCTAGC 25715 37 100.0 34 ..................................... GCCCGTTCAACTCGGTGTGGCGACGCTTGGGGTT 25786 37 100.0 37 ..................................... TTAGAGCATAAAGCGAAAACAATAACAAATCTGGTAA 25860 37 100.0 34 ..................................... AGACATCAGGGCGATCCTAGCGATCGCCCGTGAT 25931 37 100.0 34 ..................................... CCCTTGACCCGGCTAAACTTGATACCTTGCCCAT 26002 37 100.0 33 ..................................... TGGACAGTTTGAGTCCAATCGGCAAGTGCTAGC 26072 37 100.0 34 ..................................... TACCAGCACAGCCTTGCTCCCCTATCCGCAAAAC 26143 37 91.9 0 .........AAC......................... | ========== ====== ====== ====== ===================================== ======================================== ================== 74 37 99.9 35 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : CCTGACGGTACAGCAGCAAATATTCAACGCACAGACTCAATCAAAGATGGTGTGATTAAAAACTCTTGGACGATCGCAACTGGTGATCCTATGGGTAAGCATAAAATAGAAGTTTATGTTGGCGATCGCCGTATTGCTACTTTTGAGTTCGAGGTGGTTCCAGCTAAACGGCAAAAGCCAGCTCCAAAAGCGTAGTTGCAAGTTTTGCTATAGTCGATAAATAAAGATTAATCTCTCTTCAGCTTAGAGTTGGTGCAAACCTGTAGGTGTTTAAAAAAAGCAGTCAAATTTAATGGCTATAAGCCCTACCTGTTATGGCTTTGAACCCTTTTACACTCAGATAGAGGTTTGCACCAATTCTGAAAGTCTTACCAGCAAAGCTTTTGACCTATTTTTTCATAATTCATCTTGACATCCCGATGGCTGAAAAGCTATATTTTGTCCATGTCTGCACCACTGAACCTTGAAAACCATATACAGCAAAGCTTCTGAATCGAGCA # Right flank : CCCGTAGTATGCATTTGACAAATTAAAGCTTACTGCTTGAGATTACAACTTAAAGGCGTTGCAGAGAAAGCGGGGTGTTTATATTTTCTGTTTTAATTGAAAACTCAATTCTTGGCGTTCTTGGCGTCTACCCTGCGGGAAGCCGCTTGCGCGTCTATGGTGGTTCATTATTCATCCCCATTTTATGCAACGCCCTGGCATTAATCCCTATTTGTTCACGTCTTGTAAACTTACACAACAACCGCCAAGGATTTTAATCCTTGGCTTATAGTTAAAGTCGTCTCAAGACGACTATAAAATTTCTTAGTCTACTTCAAGTAGACTTGAACTATTAGCCCGCAGTTTACTTGCGGGCTTTTGGGCTTTCGGGCTTTCAGGCTTGCATATTTAAAAACAAAAAGGTAAGGGAAAAATTTTTCCCTTACCCAATTCCCATTACCCTTGACACCGAAGCTTTAGTAAGCTCTGCGAGTAAATTGGTAGTACAAGAAAATTGCAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //