Array 1 553291-548198 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMTR01000021.1 Faecalibacterium prausnitzii strain CNCM I 4541 NODE_1_length_985399_cov_34.0334_ID_4765, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 553290 33 97.0 34 .....T........................... AGCAGCACAAGAAAATTGCCGCAAAAATCCGCAT 553223 33 97.0 35 .....T........................... ACCAGCGGCGTGAGTGCAGTGGTCGATTGGTTCAG 553155 33 97.0 35 .....T........................... CTGTCCAGAATGCCTACACGGTCGGGAATTGCAAC 553087 33 97.0 35 .....T........................... ATAGATATACTCACCAGTCAGCTTTTTCTCAGCGA 553019 33 97.0 34 .....T........................... AGGCCAGTGCCGACCACCTTTGTGCGGTTGGTGT 552952 33 97.0 34 .....T........................... AAACTGGCGCACGATAGCGCGGCCCAGCTTTTTC 552885 33 97.0 33 .....T........................... CGCAATAATCCCCGCCGAATGTGCATTTCCCGC 552819 33 97.0 33 .....T........................... ATGTAGTACACGCACCTCACGTTCACACGGGCA 552753 33 97.0 34 .....T........................... TTTGAACTTGCCGACCATCTCCCAGTACCTGTCA 552686 33 97.0 34 .....T........................... GCATACCACAGCTGCCAATTGCCAAACCATCCCT 552619 33 97.0 35 .....T........................... TCCTTTCGAAGGACGGCTTCAGCGTGGGCGCACCG 552551 33 97.0 34 .....T........................... TTACTGCCACGATACGGCACACCATATCTCACGG 552484 33 97.0 35 .....T........................... ATGCATGGAGCGAGAAGGCCAAGAAGGAAATGCTG 552416 33 97.0 35 .....T........................... CTCTGCACGGCGAAGCTTTTCCCGGCTGGACTGCA 552348 33 97.0 34 .....T........................... TTCCATCGTGTGAACGTGCTCCAAAAGCAAAATA 552281 33 97.0 35 .....T........................... CTCGTAGCTGGCGCGGGTGCGGTCCTTGCGGTAGA 552213 33 97.0 34 .....T........................... CTTGATGTGAGCGCCGTCTACTTTTGCCATCTTT 552146 33 97.0 33 .....T........................... ACTCATGGGTGGTGTCCTCCTTTATCGTCCATG 552080 33 97.0 35 .....T........................... CCATGTGATACCGGCCTCCCGGAGCTGTGCGCCCC 552012 33 97.0 34 .....T........................... TCCGCTTTGGTAGTTGTATGCCTGCTGCAGCCAT 551945 33 100.0 34 ................................. CACCTCACCCATGAACTGCTTCCAGTGGTACCAG 551878 33 100.0 34 ................................. CTGTCTTCGCAAATCTGGGAGAGCAAGCAGTACT 551811 33 100.0 34 ................................. TTAAAACGTCTTAGAAAGGCCTCTGAGCCGGGAT 551744 33 100.0 33 ................................. AGCTACACGGCAGGCTATGTAACGAAAAAAATA 551678 33 100.0 34 ................................. TTCGAGATAGCTCTGAATCTCTGCGTCTCTGTCG 551611 33 100.0 34 ................................. GTAGTAGTGCTGCACTGCCACTGCCTGCCGCAGG 551544 33 100.0 35 ................................. TCCTCTGGTGGCTCTGGAATTCTTAGCGGAATCGG 551476 33 100.0 34 ................................. TGCTCGTCGGTCAGAGCGGGAACCACCACGTCGG 551409 33 100.0 35 ................................. AAGCATGAAGAAGATTGAAAAGGCTACGCTGAATG 551341 33 100.0 35 ................................. AGTAGTTCGATCGGGGGTAAGGAAGCTTCTGCATC 551273 33 100.0 34 ................................. ACTATCCCCATCACCGGATGGAAAACGGACAGCG 551206 33 100.0 34 ................................. TTCGCAGCTGAACTGGACATTTCCAACGCTGCCC 551139 33 100.0 34 ................................. TGTGCTGTCCGGCGTGGTCGTGCCGGTGCTGGAC 551072 33 100.0 33 ................................. AGCTTACCCACCGGCTCTTTGCCGCGCGGGTGT 551006 33 100.0 35 ................................. TATTTTAGCTGGCGTTTATGTGTCCGTCAAGCCTT 550938 33 100.0 33 ................................. TCTGCTGTCCATAGCCTCCTGTTTTGTCCGTTG 550872 33 100.0 35 ................................. CATAGCTCCAGTTTGATGAGTTTCCGCCGCCTGCG 550804 33 100.0 35 ................................. TCCTGCCGGGTGGGCAGATTGTCCTTTTTCCACTG 550736 33 100.0 36 ................................. GTTGATCAGATGGAACACAGCATATCTCCATCCAGC 550667 33 100.0 35 ................................. ATGCAAAGGAGCGGAAGACCGCCGCAACCCCGCCT 550599 33 100.0 35 ................................. TTCGATGGACAGCAGCTATTGCGGTTACTGGAGTA 550531 33 100.0 33 ................................. TGGAAAGAATGTGGAAAGAAAAAGATGTGGTTG 550465 33 100.0 34 ................................. TTGCTGGCCGCTGTGCGATGAAATACACGCGGGT 550398 33 100.0 35 ................................. ACGATCGTCTGGCACATAAAACCTGATAAGAGGTT 550330 33 100.0 34 ................................. CCTGAAGCGCCGACCGCGCTTTACCCGGAACGCG 550263 33 100.0 35 ................................. CATCATCTATCAGCGGCACCAGCGGTATATCCTGG 550195 33 93.9 34 ..........C..T................... TATTACAGCAAGAGCCGCCCCTCCCAGCTTCGAG 550128 33 90.9 37 ..........C.A.......T............ CCAGATAAGCCGCAGGCAGTCGGCAATGATGGAGTAA 550058 33 100.0 36 ................................. AGCAGCGTGTTGTTGGCAGAGTTATCGTTATAGGCG 549989 33 100.0 34 ................................. TGAGATTGCAGGGTGACTGCCGTGATGCGGGCCG 549922 33 100.0 36 ................................. ATCAGCTTTTCGGACGAGTTTGCGCTCGTGCTGGCC 549853 33 100.0 36 ................................. GTTCAGTGGGCCATGACATGCTACAGCGGTCAGCAA 549784 33 100.0 35 ................................. TGAGCGGCATTCTGGACGTGCAGACCATGCTGCAG 549716 33 100.0 35 ................................. TGAGCGGCATTCTGGACGTGCAGACCATGCTGCAG 549648 33 100.0 37 ................................. CCAGATAAGCCGCAGGCAGTCGGCAATGATGGAGTAA 549578 33 100.0 35 ................................. GATCACTCCGATCCGCTGGCGGCGCAGGCCCAGCC 549510 33 100.0 35 ................................. TCGTTGTGATTTGCTCGAGTAAAGAACATTTTTTC 549442 33 100.0 35 ................................. GAAAAAATCTTTACCGGAGGCGGCGTGGAAGCAGG 549374 33 100.0 34 ................................. TTGTCCTGATACTGGCGGGTCTGGATGCGGCCCT 549307 33 100.0 34 ................................. TTCCAGCGCGGCCAAAGTCCGCTCAACCGTGCGG 549240 33 100.0 35 ................................. TTTCCGAGTTTGAAGCATGGTGGGCCCCCGTCGTC 549172 33 100.0 35 ................................. TAACTGGAGCTATGGAAAAAGCCACAGTGAAAGCT 549104 33 100.0 34 ................................. TTTGCAACTTTTTTTGTGCTGCATAATCGGTCTC 549037 33 100.0 34 ................................. CACTTTCCGCCGTAAAGCGTCACATACCGGAGAT 548970 33 100.0 34 ................................. AGTCTGAACGGACAATCAAAAACGTGGCAGACAA 548903 33 100.0 34 ................................. ATCCGATGACATGAAACTATCTTTGAGCTTTATC 548836 33 100.0 34 ................................. CTGCTGTCCGAGTATGAGGTTTTTGCAACGCACC 548769 33 97.0 34 .....T........................... TATACCCCGGAGGAAGCCGCCCAGCTTGCAAAGC 548702 33 100.0 35 ................................. CTTTTCGGACAGCGCATCTGCCTGTCGGACCAGCT 548634 33 100.0 35 ................................. AACGCCAACAGAAGGAGAAAAACAAAATGAGAATT 548566 33 97.0 35 .....T........................... AAGGTGAGTTTCGGCAGTAATATCGCTATTCCCAC 548498 33 97.0 34 .....T........................... ACCAGCGCAGGCAGGATGTGGTAGCTTGCCACAA 548431 33 97.0 34 .....T........................... AATGGTGCGATGGCCGATGGCCTTGATGCCGGCC 548364 33 100.0 34 ................................. GATACCCAGCCGACGATCGTGCCGAGCACGTTTG 548297 33 100.0 34 ................................. CAGACGCCAGTGACGGTCAGGCCATCAAGGCTGC 548230 33 87.9 0 .....T..................AG......C | ========== ====== ====== ====== ================================= ===================================== ================== 76 33 98.7 34 GTCGCCCTCCTCGCGGAGGGCGTGGATTGAAAT # Left flank : CCGTTTTTCTGGAAGTGAGGTGCTGTTCATGCTGGTTCTCATCACCTACGACGTCAACACCGAAACGCCTGCAGGCCGCAAGCGCCTGCGCAAGGTGGCGAAGAAATGCGTCAACCACGGCCAGCGGGTGCAGAACTCGGTGTTCGAGTGCCTGCTGAACGCTTCGCAGTACGCCGTTTTGAAGGCCGAGCTGACCGCGCTGATCGACCCTGCACTGGACAGCCTGCGGTTCTATCAGCTGGGCAACAACTACCAGAGCAAGGTGGAGCATGTCGGCCTGCACCCCGATTTTGCGCAGGATGACGTGTTGATGTTCTAGCATCCCCCGCCGTGCGAGGCACAAGCTCCCATGGTTTCCCCGGGCGCTTCGCACTGCAAAAACAGACACCTTAGCACGATTTGTTTTGCATTTTGCCGGAACCTTTGTAAAGTTCCTTTTCAAATTGTGCACAAGCGTGTATAATGGAACAAAAGCATTGGATTTTTTCGCTGCTTTTGCT # Right flank : GCTCCCCGCACAGATACGTTGCATGGCATCGTCCACCGCCTGTTCCGGGCCCATTCGGGGCGGGCGGAAAGGCCTTCACGGGCAAGAAAAAACCACGGTGCATCTCTGCACCGTGGTTTTTTTGGCGGCGGCATATTGAACTGCCGGGCGTATGAATTTTGTTTTTCTGTTCTCTGCTGTGTCCGGCAGCGGGCTTTCGTCTGCGATCAGCGCTTCTTCTGGGTGCCCTTGCCCACCGGGCCGCGGGGGCGGCGCTCGGCGGCCTTGGACTGCAGCGCGGCGCTGCGGGTCTGGGCGCGGCCCTTGGCAGCGGCGGCACGCAGGCCGTTGATCTCGGCCTTGGTCAGCTCGCGGTAGGTGCCGGGCTTGAGCATACCCAGCTTGACGACACCCTCAGCGTTGCGCTTCAGGCGCACCACCTCAAGGCCTACGGTCTCACACATGCGGCGGATCTCGCGGTTCTTGCCTTCCTTCAGGGTCATTTCCATAACGGTGCGGCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATTGAAAT # Alternate repeat : GTCGCTCTCCTCGCGGAGGGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //