Array 1 172054-174918 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYDH01000003.1 Flavobacterium sp. LS1R10 NODE_3_length_321487_cov_120.302822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 172054 36 100.0 30 .................................... CTGTTGGCTTCTTCTTGGCAGCCTTGGTTA 172120 36 100.0 30 .................................... AAGGACGTTAGACGCTGATCATGTAGATAG 172186 36 100.0 30 .................................... TTGTCCGGTGACCGTTGGTTTCAAAATAGG 172252 36 100.0 30 .................................... AAAAACAAACTTCATCGTTTGCCTCTGTAG 172318 36 100.0 29 .................................... TTGAGTAGGTGTTTGAAATACTCTAACAG 172383 36 100.0 30 .................................... GGAACAAATCAAAAGGATATGCGGATAATA 172449 36 100.0 30 .................................... TTGGCGCAAGTTTAGCCACATAAGTGTCTA 172515 36 100.0 29 .................................... TTTCAAGCCGGACATGGTTACGCTGCAGG 172580 36 100.0 29 .................................... TGACGGAGCGACGTTAACTAATGAAGTAA 172645 36 100.0 30 .................................... TCTGGAATGGTTTAAAAACACACCGAATGC 172711 36 100.0 30 .................................... CAATCTTTCCGCTATGAGTTCTCTAGCAGG 172777 36 100.0 30 .................................... TACAATCCATTCTTTAATGGTAATACTTTG 172843 36 100.0 30 .................................... TGATAATTATCACTTATCAACTGATGGGTA 172909 36 100.0 30 .................................... ACAACCGCGTGGAAGGTTATGAATTCAATG 172975 36 100.0 30 .................................... TTCGCCTGTAAAATTAGGATTAAACAAGGG 173041 36 100.0 30 .................................... GAATTGAATATCTGGAGTTGAAACAACATA 173107 36 100.0 30 .................................... TTTCAATGCCATAGCCGAAAGTGCACAGCA 173173 36 100.0 30 .................................... CTAATCCACATATTAGCAGATTGAGCAGAA 173239 36 100.0 30 .................................... CGTTGCTATACTCTTTACCGTCCACTTTAA 173305 36 100.0 30 .................................... CCATTGGCACAGCTATAACATTGTATACTG 173371 36 100.0 29 .................................... AATATCAATGTGGAGAGAGACCGCACGGG 173436 36 100.0 30 .................................... TAAGGGATGTTTTTCTATCATTAGGCAATA 173502 36 100.0 30 .................................... TTTGCTTTTTAATTATATTCGCTCCGTTTG 173568 36 100.0 29 .................................... TCTCTTACGGGTTTGACAAATATAATAAA 173633 36 100.0 30 .................................... AATATCTGAATGATTGTAATGCTGATAGTA 173699 36 100.0 30 .................................... CTTCTAATATCTCTAATAATTCCTGCATTG 173765 36 100.0 30 .................................... GCAGATACTATTCATGGGGAGTCCAGATGG 173831 36 100.0 29 .................................... CTAACAGCTTGTATAATTAATGCGGTATT 173896 36 100.0 30 .................................... CACTAACGCCTATTGAGTTTGAGGCTAGCG 173962 36 100.0 30 .................................... ATTTACTAGAGGCAATATTTGCGCCCGCCT 174028 36 100.0 29 .................................... TAGCAGATGAATTAACTTTATTATCAATA 174093 36 100.0 30 .................................... ACATCAGGAGTGTATAAATGAATTGTTGTC 174159 36 100.0 29 .................................... AGTATAATCATATTGAAAACGATTAGTAG 174224 36 100.0 30 .................................... AGAGAGAAGAAACACATGCCAATAATTCCA 174290 36 100.0 30 .................................... GAAACAAAGCGGGATTCACGTCGCTTTTTA 174356 36 100.0 30 .................................... TTCGTGCAATAACACACGGTGCAAAAGTAG 174422 36 100.0 30 .................................... CAGTAGTTCAAGCGCTATTCAATTGCCTAT 174488 36 100.0 29 .................................... ATTCCCGTTGGAATGCCACCGACTTCAAG 174553 36 100.0 30 .................................... CTACAGGAATATCAGAAGAAGGCATCAAGC 174619 36 100.0 30 .................................... CCCTAAAATATACAACCTCATAGTTTACGG 174685 36 100.0 30 .................................... AAAGAGTAATCAAAGAAGCGAGATCAAAAG 174751 36 100.0 30 .................................... TTTTACAAACGCTAAACACCTCATTCCGTC 174817 36 100.0 30 .................................... TTTTTAAAATCTCAGTTCTTTCTATATACG 174883 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 44 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATTTAATCAAGCAAGCTCGTGATCGAGATGAGTATGTTGAATTTGTTCGAATGAAGTTAGATAGAGCTGAAAAAAGCGGATTTAGCACCAAAACAAAAGAGGAATTATTAGCAGAAATTAAGAAAAAACTAAATGTTTAGTTATAAACTTAATATACAAGCAGGGAAGATTTGACTCGAATTTTTGAATATGGAATTGGTCGTTTCGGATTTCTTCAAGTTAATAAATATTATGAAATGTTTTTTGATTGCTTTTCAAAAATCGCATCAAATCCATATCTATTTCCTGAAGCTATTCGTTTTCGTCAAGGTTATAGATATTGTATTTGTGGAGTGGATACTATTTTTATAAAATTAATGCCAATGAAATAGAAATAATGGCAATTATAGGAAGACAAGATTTTTAAAGGTTCTTTGACATACAGTTTTTCATTGTCTTAAACAGCCAAACCACAACTGAAAGGTATGGCATCCGCCCAGCAGGGATGCAGTAGCTTTCA # Right flank : TAGTTGGCTTGTTACCTTCTAATTATCAAAGGAATATGGGTGAATGTCGTATAAAAAAATGCCTCTTTTTTGGATTGATATCCCAATATTGAGGCATTTTTTTATTTCTATCAATAAAAATTCGATAAATGGTAGTAGAATCATAGTAAGAGGCAAGATTCAATGATTAATTTTTAGTGCAATCTGCAGGGACAGGTCGCGACCTGTCCGTACGTTATCCAAATGCAATAGGTATTGGGGATTATCCGCAAAATAATTTATATTTCGTTACGATTTGTGTGCAAGATAGAAAATGTTGTTTTGGGAATGTGAATAGGGCAGGGACAGGTCGCGACCTGTCCGTACACTAATTATGAAAAAGAAAAAATAATGAAAAATAGAAAGCGAAATAGAATGCTGGGATATGATTATTCGCAAAATAATTTATATTTCGTTACGATTTGTGTGCAAGATAGAAAATGTTGTTTTGGGAATGTTAATACGGCAGGAACAGGTCGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //