Array 1 16180-10988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQDH010000026.1 Myxococcus sp. XM-1-1-1 NODE_26_length_130638_cov_191.600463, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 16179 37 100.0 32 ..................................... AAGAGCACCAAGGCCGCGCTCACGCTCGCGTC 16110 37 100.0 35 ..................................... CTCACGCTCCCAGTTCCGCCGCGAACGCAGTGGAC 16038 37 100.0 37 ..................................... CTCTACCCACAGATTCAGCATGCCGTTGCCCAGGAGC 15964 37 100.0 34 ..................................... TGGAGATGGAAGAGGAGGAAGCGTGAACTTCATG 15893 37 100.0 33 ..................................... GGGCCGAGGTCGTAGACGCCTCTGCCGGGGCTC 15823 37 100.0 34 ..................................... GCTGGGACGTAGCAGCGCGGAGTGAGCCCCGTCA 15752 37 100.0 32 ..................................... GGGTGTTGCTACGGCGGTGCTGCGACTACGTC 15683 37 100.0 35 ..................................... GCCCACGTCTCGGTGAAGTCGGCCGCGTCGGCCAG 15611 37 100.0 33 ..................................... GATGGGGTCTGGGCGCTCTCCGAGCACGCTGAG 15541 37 100.0 36 ..................................... TTGAGGTTGGCCAGCGTGCGCTCGCTGTCCACGAAG 15468 37 100.0 33 ..................................... ACCTTGACGGCCATGCCCACCGAGAAGGGGCGA 15398 37 100.0 33 ..................................... CCTTTGGCCTCCAGTGCATTTTTCTCAGCCCGG 15328 37 100.0 34 ..................................... CGCCAAATCCACATTGAGCGCTGCGCCCTAAATG 15257 37 100.0 33 ..................................... CTCGTGGTGGGCACTGCGGAGGGCCCGAGTCAG 15187 37 100.0 34 ..................................... GCCCTCGGCGTCCGTCAGCGGGCCGTCAGGCGGC 15116 37 100.0 33 ..................................... TGACGAGGACAGCACCGTCGTCATCAGCCTGCT 15046 37 100.0 34 ..................................... GTCTGCTGCTGCATCTGGGCATTCGCGAGGTTCG 14975 37 100.0 32 ..................................... GGCCTGCCGCACCAGGGCGCGCCTGACGGTGC 14906 37 100.0 32 ..................................... CTTCCCCGCAGTCTCCAGCCTGGCGCGGGGCC 14837 37 100.0 35 ..................................... GTTGTAGAAGTCCTGCGCCATGACGAAGTCCGGGC 14765 37 100.0 32 ..................................... GGCGTGAAACCGGCCTCACGCATGCCGGCCTT 14696 37 100.0 34 ..................................... TCACGCAACATGGGGCGGATGAGGTCCCACGTCC 14625 37 100.0 34 ..................................... CACTCCGGGCAGCGGCGGCGCGTCGCGGCCTTCT 14554 37 100.0 34 ..................................... ACCTCGACGCGGTACAGGGCGTACTTGTCCTTGA 14483 37 100.0 32 ..................................... ATCGCGGGGGACAGCGACTCCACCGCCCGGAA 14414 37 100.0 36 ..................................... TCTGCGGCGCGGGCGCGCGCGTCAGCGATTGAAGTC 14341 37 100.0 32 ..................................... TGGCTCGACACGCTCAGCATGAGCCGCGCCCT 14272 37 100.0 33 ..................................... AAGGCCGGCGACGCCTTCTCCTTCGCGACCACG 14202 37 100.0 34 ..................................... TGCGCCAGAGGTGGAGGAGTTGGTGGACGCGAAG 14131 37 100.0 33 ..................................... CAGACGACGTGCGTTTCGGACTCCGCGCCGTCA 14061 37 100.0 34 ..................................... TCCCCCACCTCGGACAGCGCCGCGCGCAGCGGCA 13990 37 100.0 32 ..................................... TGGAGCTCCGCCCGAGCCGGGCGCGGCACCAT 13921 37 100.0 34 ..................................... ATGAGGTAGCCGGTGAACACCTTCTCCCCGTCCA 13850 37 97.3 32 .............................A....... ACCCGTACATCCACTCGAGGCAGTGCCACGTG 13781 37 100.0 34 ..................................... TCGAGTCCCTCCGGTGACCGCATGGGCCCAGGAA 13710 37 100.0 33 ..................................... CATGCCGCTCGGTCGGGGTAGTCCGCCGCCATC 13640 37 100.0 34 ..................................... AATGATAGGCGCAGCCTCGCGCGTCGCTTGGGCC 13569 37 100.0 33 ..................................... GTCAGCTCGCGCTTGATGTTCATCGCCTCCTGG 13499 37 100.0 33 ..................................... TGTACCACGGGGATGCACAGGCGCGCGGCCTCC 13429 37 100.0 33 ..................................... AGCTGCGCCTCCTGCTTCGCCGCCAGCTTGGGG 13359 37 100.0 33 ..................................... ACCAGCAGAGGTAGAATTCAGGCGAAGTTGAAG 13289 37 100.0 34 ..................................... ATCGGCGGCGTCTACGGCAGCCTCAACCAGCAGG 13218 37 100.0 34 ..................................... AGGGCCTCAAGCTCATCGTCGGTCAGCATCGGAA 13147 37 100.0 33 ..................................... TCAGGCGGGAGGCGCGTCAGTTTCTCGTACAGC 13077 37 100.0 33 ..................................... ACGTGTCACCGGCCGATACGGCGTTGTCGAGAA 13007 37 100.0 34 ..................................... GCGCGCGCGGCCTTGTGCGCCGCGAGGTCCTTCG 12936 37 100.0 35 ..................................... ATGTTGTTCGCACCGGCCGAGGCGGGCGGACGCCT 12864 37 100.0 32 ..................................... GCACCGTCCTCCGCGCCGAGTGTCTCGGCGCG 12795 37 100.0 34 ..................................... CCCGGGCCCGCGTTGCACAAGCTGCGCTCAGGTG 12724 37 100.0 32 ..................................... CAGGAGGAGATTCGCAGCATGCGCCCGGGGCA 12655 37 100.0 33 ..................................... CACTGGTCACGGCCGCCACGCCCAGGTGTCGGC 12585 37 100.0 38 ..................................... CACTCGGCGGGGAAGCGGTCCACGCGCGAAGGTGCGAA 12510 37 100.0 33 ..................................... TTGACCACTTGGCGCGCCTCGACCGCGCCGGAG 12440 37 100.0 35 ..................................... TCCGTCTCCGCTACCACCTCCCCATGCACCATGGT 12368 37 100.0 33 ..................................... TGGTTCGCGGTGCCCACGTCCTTGGCGCCCCGC 12298 37 100.0 33 ..................................... TCAGCGGTCAATGCTCATATCCGGGCGCTGTCC 12228 37 97.3 34 ....................T................ CCATGTCGAATGCGACCAAGCAGTACACGTCCAC 12157 37 100.0 32 ..................................... TCCCCCTCGCCGCACCAGCGATGAAACGTGGT 12088 37 100.0 34 ..................................... ACGTGCTCGGGGCGGTCGAGGGCGCGGAACAGCA 12017 37 100.0 35 ..................................... CAGCGAGTCGGGGCACCTCATGGGCGGCCCCCGCA 11945 37 100.0 37 ..................................... AACGCCGGGGCGACCGAGGCCGACATTTGGCCCGTCA 11871 37 100.0 34 ..................................... TTCTACGTGGCCAAGGCCTCCCGCTCCGAGCGCG 11800 37 100.0 38 ..................................... GATGACGTCGAACGCGGCGTCGCCGGGATCCACCGACA 11725 37 100.0 33 ..................................... GTGACCCCAAGGTCATGGCCGAAATCATCGAGG 11655 37 100.0 32 ..................................... TCTTGCATGCGTCTCTCCCGGCTGACGGTGGC 11586 37 100.0 33 ..................................... GCAATGGCGTCAAGCAACTCGGACTCAATGGGC 11516 37 100.0 35 ..................................... ACGGACCGCATCCTCGCGGAGAACGCCGGGCTGTC 11444 37 100.0 34 ..................................... CGGTTCCGGGGCCATCTGTCTTTGGCCCGCGTTT 11373 37 100.0 37 ..................................... CTCGATGTGGAGCCAGTCGTGCTGTTGCGTGCGTCGG 11299 37 97.3 32 ....................................T ATCACGGACGCGGGCAACGAAATCCTGGTGAA 11230 37 100.0 31 ..................................... TCCATGTCCAGCCAGAGCGTGAGCTGCACCT 11162 37 100.0 32 ..................................... CAGGCGTCATCGTTCGACACAATCGGCTCGTC 11093 37 100.0 32 ..................................... GGTGCGCCGGCCCGGTGGCACCACCACGAACT 11024 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 74 37 99.9 34 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : CGGAAGGTCACCGTGCTCGTCTGCTACGACGTTCAGGTGAGTGACCCGACGGGCCCCAAGCGGCTCCGGCGGATGGCTCGGATGTGCAAGGACCATGGGGTCCGGGTGCAGTACTCGGTGTTCGAGTGCGTGCTGGAGCCGAAGGACTGGGTCGTGCTGCGCGCACGGCTGCTCTCGGAGCTGGATGCGGAGAGCGACAGTCTGCGGTTCTACTTCTTGAGCGAGGATGTCGCTCGGAAGACGGAGCACCATGGCACGCGGGTTCCATTGGATGTCGAGGGGCCGCTCATCCTGTGAGCGGCTTGCCTGCCCTGACTGGGGCGCGCGAACCTGTCCCGGTGCGTGCTTCGTCGGAGGTTCGCGCTCTTTGAAATCTCGAATAGTCGTAGGGAGTTACGCGGAGGTGACGAGGCACGCGGACTGGATGGACGGGCCTGTGGACCCAAGTTCGCGCGGACCGGCCGGATTCCCGAGTGATTGTGGTAGTTTGGACGGGCAGG # Right flank : CAGCACGCTGGTTAGAATGCCCTGCAGATGGGGTCGCTCTCCGTCACGGCAGAGAGCCTGAGGCGCATGCCTCAACCAGATGATCTAAGGTCCAATGTCGGAGAGGGGATGGCGCGATTCTTCTGGGTAGACGAAGACAACGCGGTCGTGCGCCGGCATGGCGGTGAGGTTCATGGCGGGCGCAAGTGGAAGCTCCCTGGGTTGCTGCGGTGCCCGACGTGTGATGCCACGTGGAGTGGCTCCGGACATTTCTTCCCTGGCGTGGACCTGTCCTCGCTGCCAGAGCGTCGTGAACTCGAGAGGGCGAGGCCCGAGCCTCTTCCCGAGCTCGACCGCTTGCGTGCGCTGGTTCGCCCCTTCACCCCCTCAGGTGCCGCACTGCCTCCCGGAACAGGCTTCGGACCGCTGGAGGGAACGGGATTCGGAAAGCTCCCGGCGTTTGCCTGGGTCGTCGAGGTGCTGCTCGTCCACCAGCAAGCCCTGGAGATGCTCCAGGCGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 71592-73429 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQDH010000023.1 Myxococcus sp. XM-1-1-1 NODE_23_length_182919_cov_198.520668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 71592 36 97.2 34 .....................C.............. GAGTGCTTGCCCAGCACCTCTCCGAAGTCGCAGT 71662 36 97.2 35 .....................C.............. TCCTTCTGGTCCATCGCCTGGGCCGCATCCGCCAG 71733 36 100.0 37 .................................... GCCCAGGCGGGATAGGGGGCACTGCCGGCGCTCATGA 71806 36 100.0 37 .................................... TCCCCGTGGCGAGCCCAGAGGGGAATCTCCCCGGCCT 71879 36 100.0 36 .................................... ATGCCGATGAACTGCCCCATGTTCGAGCGGGGCAAC 71951 36 100.0 34 .................................... AAGAAGTTGTCCACCTCCGGGAAGCTCACGCCCA 72021 36 100.0 34 .................................... TCGGTGTTGTTGCACGTCATGTATCGGGTATCGC 72091 36 100.0 37 .................................... AGTGCCCCCTCGGCCAGCGAGGCACCGAGGTCGAGCA 72164 36 100.0 37 .................................... CGTCCTGTTGATCCAAATGCCAAACAGCAGCCACAAC 72237 36 100.0 36 .................................... CGCTTGGCGTTCGAGAGCAGGGTCGGCGTGACGTTG 72309 36 97.2 38 .............C...................... TTCTTGTGTATTGGGTAGAGGCCAACGGCGGCCTCGCC 72383 36 100.0 36 .................................... TTTAGCCTCTGATTCATCATCCACTCAAAGGCGTTG 72455 36 100.0 35 .................................... GAATGCTTCTTCGTGCACTGCTCTCCCTTGAGAAA 72526 36 100.0 38 .................................... AGGACTTGGTCGATGCTGATTTCCCGCTCGCTGTGCGG 72600 36 97.2 34 ...........A........................ CGGCATCCAGTCTCGTCATGTGCTCCCTCCGGTA 72670 36 100.0 38 .................................... CGGGCCCTGCGCGTGCGGCTGCTACTGGAGGAGGTGCT 72744 36 100.0 36 .................................... TTGTCGTCCATCATCCCCGAGAGGGCCTCCCACTTC 72816 36 100.0 38 .................................... TATGGGCCGGCCCTGACTGCGCCGGCATCGCCCGTAGG 72890 36 97.2 35 ...........T........................ AGCGACTGGAAACCATCGTTAGCCAGCAGGAAAAG 72961 36 100.0 41 .................................... ACCTGACAGAACGGGTAGCGGATGGTCTCGAACGAGCGCCC 73038 36 100.0 38 .................................... ACCGGAATCTGACCGGTCGAGTGCGTGAGGTCCGTCGT 73112 36 100.0 33 .................................... CTTGACCGGCCGGAACTGCTTGCCTCCGTGGGT 73181 36 97.2 35 ........T........................... ATGTCCCACGCGGCGCGGAAGTACTGCACTGAGTA 73252 36 100.0 33 .................................... TGGGGGGCCTGCTGGACGACAACGTCGCCGATG 73321 36 97.2 37 ...............C.................... CTGCGCATCGTCGCGATGACGTGAGCCGGGTAGCTGA 73394 36 97.2 0 ...............C.................... | ========== ====== ====== ====== ==================================== ========================================= ================== 26 36 99.1 36 CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TGGTGGTGCATGAACTCGCGCTGGATGGACGGTATGTGCCCGTGCTCACGGTGCAGACGGGGTGAGGGGCCGTGCGCCTTGGGGAGGGGGTGTGATTGTTGTTGGAGGTGTCTGTCTTGAAGGGGGTGGCGTGGTCCTGTCTGTAGGGCGCGGTGCTGTCATGGGTTTTCGGGGTGGGCGTGAGGAACTTCGCTGAGTGGAGGTGGTGATGGTGCGGGGTGGGGCGAAGGAGCGTGCGGGCGAACGATGTGTGGGATTGGACATTCAAGCACCTCGGCGTGGCGAGGGCCGCGGAGCTTGAGCTGGGTGAAAAGCCGTGGGGTGACGCGGGGGGGCTCTTTGACAGGTGAATAGGTGCTTGAATGGGGAGTGGGTGAGGGATTTCAATGGGTTGGGTGATGTGGGATGTCGCGTTGGCGTTGGAGTTCGTGGACAGGGTGGGGGGTGCTTGAAAACGGGGGTGGTAAGAGGGCGGAATCGTTTGGGATTCCAGGGCGGCT # Right flank : CGTGGCGACGTCGTGATTCATGCCGATGCGGCTCCGTCGCGGCCTGTCGGGTCGCGCTCGAGAGGGAGCTTGCTCGGATTGTGCGGGATCTCGTAAGGGAAGGGTCCAAGCTGCGGAAGCTCGTCGTGAAGGGCGCCGAGGAGTGAGTCGTGGAGCGACGGTTCTTCGATTTGAACTCGGACGAGTACGTCAAGGGGCGCTGGTATCTCGGGGACCCGACCCATCTGGACGGCGGGGAAGTTGAAGACGTCTGGCGGTTCTCGGACGGTGTTCCCGTCGAACTCTCCGAGAGACTGCGCGTGCCGGTGCGCACGCCCGGAACCGCGCTCGATATCGAGTTCGCGGGAGTGGGCCTCGTGTCGATTGTCTCCGCACGAGTCGCGTCAGTCTTCCGAGAGTTGGCGCCCCACGACGTTCAGCTCTTCCCCGTGGAGGTCGAAGGGACGAGCGAGACCTGGTTCCTGCTCAACGTGGCCAGACAGCTCCGCTGTATCGATGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 88907-91343 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQDH010000023.1 Myxococcus sp. XM-1-1-1 NODE_23_length_182919_cov_198.520668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =============================================== ================== 88907 31 96.8 44 .................T............. ACGAAGCATTCGGGCTTGAAGTCCTCCTGAACGGTGATGCCTCC 88982 31 96.8 45 .....G......................... TTGATCCACCCACCACGAGGGTTGACCAGAGAGGTCACTTCCTCC 89058 31 93.5 39 ............A..............T... TCCGTGCCGCTAGCGGAGAGGTCGGGCGTCACGACCGCC 89128 31 100.0 45 ............................... ACCTCCCAGTCCGGGTCCATCTGCACGAGGGTCGTGATCGCCGCC 89204 31 100.0 43 ............................... CAGAGAATGTAGTAATGTGGCCCCTTACCTTGTGCAGGCCGCC 89278 31 100.0 40 ............................... CGTGCTTCTTCCGCATCCTCGAAGGCACCACGGTCCCGCC 89349 31 100.0 43 ............................... ATGGCATCCACCTCGGGGGGCGCTCGAACTCGAGCTTGCCGCC 89423 31 100.0 43 ............................... GTGCCAGCCGAGCAGGTGTACACGCGATCATCGGGGATCCGTT 89497 31 100.0 43 ............................... CGCGTGAGCGCGTTGGGGCTCGCGGCGTAGATGGGCGTCAGCC 89571 31 100.0 39 ............................... CCATGGACGAACGTAAGCTGATGCTGATTTCCCGCCGCC 89641 31 100.0 43 ............................... GCGTACTGGTTGGCTCGCCGTGCGTGCACCACGTCCTTCCGCC 89715 31 100.0 44 ............................... GCCGTGGGCGTGCCGCTGATGCGCAGCAACGGCTGCACGCCGCC 89790 31 100.0 47 ............................... CATTTGCCACTCCTTTACAGATATCGGAACAGGACGACGGTGCCGTT 89868 31 96.8 43 .......A....................... CTGGCTTCCAGCTCACAGGCGAGTTCGCTGGCCCGACGCCGCC 89942 31 100.0 39 ............................... CGCTCCTGCGGCGTGGGACGGCACAGGTGGACGACCGTT 90012 31 96.8 43 ..G............................ ACGCGGCGCACCTAGAAGTCGTCCACTTTTAATTAGCACCGTT 90086 31 96.8 46 ........A...................... AGCTGGCGGGCCTGCCCCTTCGACGCCCGCGCCCGCTGCGCTCGTT 90163 31 96.8 40 ........A...................... TGGTGCCAGCAGCGCTCCTTCGACTAGCCCACGGTCCGCT 90234 31 90.3 40 ..G..T..A...................... CGTTCCGGATGTCCAGCAGACTCCAGATCATTCCTCCGCC 90305 31 100.0 39 ............................... GAGGATGCAGCGCTCGATGATTGAGCGCGCTGGGCCGCT 90375 31 96.8 45 .......A....................... GTGTGCACGCACATCGGCTCGAAGTGCTTCTCCGGGTCACCCGCC 90451 31 100.0 43 ............................... GTGGCGTCCACGTGCCGGAGGAACGCCCCGCGCTGCTGGCGCC 90525 31 96.8 40 .......................C....... TGCAAGAAGTGATTGTCCGTCGCGAGCGCGAGCGGCCGCT 90596 31 96.8 40 .......A....................... CTCGGCGTCAGCGACCCGTACTCGGCGCGTTCGTTCCGCC 90667 31 100.0 38 ............................... AGCGCGCCGTCCCGGACCTCAAACCGCTTCCAGCCGCC 90736 31 96.8 42 ..G............................ TCGAGCATCTGGACGAAGGGCTCCGCGTCCTTGGACTCCGCC 90809 31 100.0 40 ............................... TGTCCCTCGGGGGAGAGGCGCACGACGTGGTGGACCCGCC 90880 31 93.5 43 ........C.....................A AGGCAGCGGTCGTTGACGACCGTGTAGCCGGGCAGGGGCCGCC 90954 31 100.0 39 ............................... AGTTGCTCGACAGGTGAGACGAGGAAGATGTCCTCCGTT 91024 31 100.0 41 ............................... TTCGTCCACAACACGCACAGCAACCCCTGTCTGTCGCCGTT 91096 31 96.8 37 .............................G. CGATCACACCATGATCGCCCCCCGTGTTGGGGCCGTT 91164 31 93.5 46 .......TC...................... ATCTCGATGGAGCCCACCAACTTCGCCTTGGCGGCCGCCTCCCGTT 91241 31 100.0 41 ............................... TCAAATCAATCATGTACTTTCTATTCGCATCTGCGTCCGTT 91313 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =============================================== ================== 34 31 98.1 42 GCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TGGGCCGCGGACCGGTTGTGCGAGGCGCTGCGTGACTGGGGCGTGGGGGGCAAGACGGCCGCGGGATACGGGCGGCTGGTGCCCGAGGGGAGCGTGGTCGTCGCCGCGCCGCGGGTGGTGTCTCGGCCGTCACCGGAGCGCGACGCGTTCAAGGCGTGGGGGGAGGCGCAGCGGGCGGCGAAGACGGAGCAGCGCAAGGTGCTCGAGGACTTCGACGCGCAGTGGAGAGCGAGGTTGATGTCCCTGTCGCGCGAGGCGCGGATGGAGTGCGCAGAGGCGCTTCGCGGGTGGGTGAGGAACCCCAAGCTCCAGGCGCGTCGCGACGAGTTGCTCAGGCTCCTGGTGGACGGCGCCTGAGGAATTCCTTCTGGGAGCGTCACGAATGCGGCGTGACGCTCCTCACGGGATGCATGTGGCGGATGAACAGCGTCCGCCCATGGTTCGACGAAGCGCTCTTTGTCAGATGAATAGGCGTTTGGCGTTTCGAGAGAGACTTCGCC # Right flank : CGCGAGGACGCGATCCTTGATGACCGCGAGCACGGGACCGAGGAGCTTATCCTGTATGCGGAGACAGCCCGAACGCACGCCGAGCAACACCTCGGGGCCATGAAGCTGGCCCGGCGCGTAGTGGTGGCCCGTGTCAGCGCCGAGTCCCACCGGTGAGTGCTGGCTGCCGGTGCCCGCGCCGAGCAACCCCACGGAACCCAGGGGCTCGCCCACTAGACTTCTTCAAACGTCGCCCCGGTGGCTCCCATGCTTTCCAAGGCGTCTTTGATGTCCTCCCGGACAATCAGCACGATAGCCCAGCCCTGGGGACGGAAAACCTTGGCGTCACCTACCCGCGCGGGGTCGATGCGCATGCCACGCACGTCCCGGTACTTCCCCAGCTTCTCGGGCCGTCCATCCTCCGGGGTCCATTTCCTGACGAGCCTGGATGCTCGCTCGTCAATGCACTGGATGAGCTGGGTCGCCACGAGAATGACGAACGGCTCAGGCTGGCCCTCAAT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 94259-93650 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQDH010000023.1 Myxococcus sp. XM-1-1-1 NODE_23_length_182919_cov_198.520668, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================= ================== 94258 31 100.0 45 ............................... AGAACAACAATATCTACAAGAACACGGCCAAGCCCCTCGTGTGCC 94182 31 100.0 40 ............................... CAAGTCACCATCGCCAAGATGCGCCGCAAGTACAAGTGCT 94111 31 100.0 40 ............................... GCTAAGTGGACAACCCTTCGCGACGACTTCAACCGGTGCT 94040 31 100.0 39 ............................... GAAGATCTTCGTCAACTCGATGAGCGACCTCTTCGTGCT 93970 31 100.0 38 ............................... GATGCAGTTCATCGGTCACTGCAAGGCGCGCCAGTGCT 93901 31 90.3 42 ......A...................GG... CGCGGCTGGACGAGAAGGTGGACGGCATTCACAAGGAGTGCT 93828 31 96.8 41 ....................A.......... CATCATCACCGCCGCGAAGGACGCGGGCGAGATTGGGTGCC 93756 31 100.0 45 ............................... GCTTCGACCCCTCGGTCTACGGCATCATGAGGGAGATGATGTGCT 93680 31 93.5 0 ..........................GG... | ========== ====== ====== ====== =============================== ============================================= ================== 9 31 97.8 41 CAACGCCTTCCGGCATCACGGCGAGCAACGG # Left flank : GAGGTCGTGTAGTTGCGGAACGTCCCACCCGCCTTGGCGTGGAGGGCGGTCTGAATCTCCCCCGAGAGCGCGAAGATGGAGTCGCCCAGGAACACGACGTTGTTGTTGTTCGCGTTGGTGATCCACGGGGCGCTCATGAGCTGACCGAGGCCGCAGCCGACGAGCAGCATGGGCGTCGTGATGACGAGGGCTTGTGCCCACCGGGGCAGACGCGCGCGACCAGAGACTTGGAACGCCTTCATAGGGTGCCTTCCCGCCAGCAGGGCTCGCCCGCCGACGTGCCGTTTGGGGATACGTCCGTGATTGCTCCGTCCTCCGGACTTTCCGGATGACGTCCGATTCGCGCACAGGATTGATTCGGAAGTCAAAGCTGAAAATTGCCAATAAGCCGCAAGGACGGCCCTGCGAAAAATTTCCAGAGCTGTTGGGCCGGACCTGTTCGCAGCGTGAAACATGTACCCGTGTGACAGGGCCGCGAGTGGAGCCACGGGTCCGAGGTC # Right flank : GAAAATCGTCGCGGCGGTCAACAGCATCACTACTTGCGGCGGACGCCTTCCCCTGGAGAGCGCTCGGCGCCCGCTCCGCTGCGGGAGGCCCATTCGCTGGGTTCTGGTCGTGGTCCGGCCTCGTCGCGGAGGATGGAGACCTTTCCCGCTGGGGGCTGGATGAGGATGCATCGCGCTGCCGCGCTGCTGCTGGTTTGGCTGACGGGCTGTGCTTCGGGGCGCGTGGTGCGCCTGGAGACGAGCCGGGGTCCACCGGTCGTCTTCACTCCTCACAGCGGCGAAGCCGGCCCGGTGGAGGTGGAGCGGCGCGAGTTCAAAGAGGCAGTGGCCCGGCTGGCGCGGCACATGCGGCCCGCGGCCAATCCCCAGTGGGCCGCACGGGACCTCTTGGGCGTGGAGGCTCGCGGCGGCGCGTACCTCTTCAACCCGCGCACCCGGCAGATGACGCCGCTGGAGAAGGCGGCACTGACCTCCGACATGCCGCCAGCGGAGGAGGAGTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAACGCCTTCCGGCATCACGGCGAGCAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 408587-408347 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQDH010000003.1 Myxococcus sp. XM-1-1-1 NODE_3_length_671936_cov_178.863156, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================= ================== 408586 27 92.6 42 .AT........................ AGCGGGCCGCTCGCCGTCGAGCAACACGGTTGCGTCTCCAGC 408517 27 100.0 45 ........................... TGCGAGCCGTGGCGCATCCCCGGGCAGCTCCGTTGCATCCACGAG 408445 27 100.0 45 ........................... CGCGAGCCGGGGCTCGCCGCCGGCCAGCACCGTTGCATCGCCGAG 408373 27 85.2 0 T........T..C..G........... | ========== ====== ====== ====== =========================== ============================================= ================== 4 27 94.5 44 CCCGAGCGCCCGGGACATCGCCTCGGG # Left flank : GCCATCTCCCAGGCCCTGCCTCCGCCCGTGCCTCGCAAGCGAGGGCTGGGGCCGCTGGGCGTGGGGCTCGTCGCCGCGGGCGTGGGCTCCACCGTGGCCGCGCTGGTGACGGTGCTGGCCGTGGGGCTGAGCTCGAGTCGCGCGGTGAATCCCACCGAGGGCGCGACGACGAACGCGGGCGCGACGACGGCGAGCGGCGATACGAATGCCGAGCCGCCCCTGCTCGTGGACCCGGGCAATGCGCGCGCCGTGACGGGACGCGCGGTCGACGAGGGTCCTGGCGGAGAGCACGCTGGCACCGCGAAGGTCGAGCGGACCGCCTCGGACGAAGGCTCGGGCACGAAGCGCCCCTCGTCGCCGGCTGGACTCAGCGCCCGCGACATCGCCGGGAATGGCAACCGGGGCGCACAGCAGGACACCGGCTCGCGGGGTTCGCGGACCGACGAGGTCTCGGACGGTCAGCGCGCCGCCGGCTCCGCCAACACGGTCGCGGCCACCGG # Right flank : CGCAGTCCGGCCGAGCAGTGCCAGCGCGGACGTGGAGGTGGCGGCCTTCCCCGAACCCACCGCCCCCAAGGCCGCGCCGTCGAAGCCCACGGGCCCCGTGACGGAGGCGGACGTCCTGCGCCTCTACGAAGCCAATGACCTGGCTGGCGCGATGGACCTGGCCAAGGGCGCCCGCCTCAACACGCTCCACGCCCAGCTCGTGCGCTTCGAGGCCACCAGCGCCGAGTCCCGCAAGGCGCTCGCGAAGGGCGACACGGCGCGCGCCATCTCCCAGCTCGCGCTGGCGACGCAGATCGACCAGGAGCTCTCCAAGGGCTGGAGCCTGCAGGGGCCGCAGCTGCGCAAGCAGCTCTCCATCCTGTACGTCCGCTCCGGCGTGGACCACGTGAAGGCCCACGACTCGAGCGCCGCGCGGGCCGCCTTCCAGCAGGCCCTCAAGTACGACTCGGGCAACCGCAGCGCCATCGAGGGCCTCAGGCGTCTGGAGACCACCGCCGAGT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGAGCGCCCGGGACATCGCCTCGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //