Array 1 226919-229568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYXE010000003.1 Klebsiella pneumoniae strain P6 NODE_3_length_409465_cov_20.351807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226919 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 226980 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 227041 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 227102 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 227164 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 227225 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 227286 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 227347 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 227408 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 227469 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 227530 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 227591 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 227652 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 227713 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 227774 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 227835 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 227896 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 227957 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 228018 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 228079 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 228140 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 228201 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 228262 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 228323 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 228384 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 228445 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 228506 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 228567 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 228628 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 228689 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 228750 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 228811 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 228872 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 228933 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 228994 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 229055 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 229116 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 229177 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 229238 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 229299 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 229360 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 229421 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 229482 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 229540 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //