Array 1 1391258-1391529 **** Predicted by CRISPRDetect 2.4 *** >NC_012778.1 [Eubacterium] eligens ATCC 27750, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ====================================== ================== 1391258 24 91.7 35 .....A....A............. GCTTCAACGTCCAATCCACCACGCTACGGCTTCCT C,A,G [1391275,1391279,1391282] 1391320 24 100.0 38 ........................ ACTTCTTCAACGTCCAATCCGCCACGCTTCGACTTCCT 1391382 24 100.0 38 ........................ GCCGCTTCAACGTCCAATCCGCCACGCCGCCAGCACAA 1391444 24 100.0 38 ........................ ACTTCTTCAACGTCCAATCCGCCACGCTTCGACTTCCT 1391506 24 95.8 0 ..........T............. | ========== ====== ====== ====== ======================== ====================================== ================== 5 24 97.5 38 TTTTGGACTTCCTCGTGCCTTCCC # Left flank : GCTTATCATCTCATCAAATGATTTCTCACCGAACTTACTTCTTACAAGTGCATTGTATTCATCTTTGTGTGGATTGTTAAGACTGATAGATATTGTATCTATAAGCCCCTTCATCTCTGGCACAATATCCCTACCATTCACAAGATTGCCAACCCCATTGGTGTTAATTCTTGTCTTTTTGCCAAATGTTTTTTTGACATATTCAGCTACCTTGATAAGAACATCAAATCTTTCTGTTGGCTCCCCAAATCCACAGAATACAACCTCTTCATACTCATCCATATTGAACTTATCAAATTCAGCTATAACCTCATCATATAAAGGTTCTCTCTCAAGCCAGAGTCTTCCAGACTCTCCAATTCTGTCCATTGTCTGTCTTAAACAAAAAGTACATGCATATGGACATTTATTAGTTAGATTAACATATAAATTGTTATGAACTTTATATAATATTTCCATGATTTAACTCCTTTCATTTTGCCGCCTCGCTTCAACTTTTC # Right flank : CACCGCTTCAACGTCCAATCCGCCACGCCGCCAGCACCGTAGTTTGCGAAAAGCTACGACACATCAGCTCACATGACACATATTCCCACACTCCAACCACTTACTTCAACGTAGTCAGCAGTTCCTCAAACGGCACACCGTCTGTCAGAGGAATATCCATCTCTATAGCCTTGAGTATGCATTTTTTTATAAATGTAGATGCTTTTCTTACTGACTCATGGAAATTCACACCATTTACAGCATCTGCAGCTATTATAGATGCAAATATATCTCCTGTTCCGGAACGCTGTGTTCCAACCTTCATAGTCTTAATAAGATAGTCTTCCCTGTTCTTTTCATAACAGTAATTACCAATATAATGGCCCCGCTGGATTCCTGTAATAACAATCTTAGATGGTCCCATTGCAACAAGCTTCATTGCAATTTTTTTAAGCTCATCATTGGAATAATCCGGTCTGTATGGCTCGTCAGTTAAAATACATGCTTCTGTGAGGTTCGGT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTGGACTTCCTCGTGCCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 1468218-1467680 **** Predicted by CRISPRDetect 2.4 *** >NC_012778.1 [Eubacterium] eligens ATCC 27750, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1468217 36 100.0 27 .................................... TGATACTTAGTGTCTGGTACTGGCTCA 1468154 36 100.0 25 .................................... CACCCGATAATTATATAATAGTTGT 1468093 36 100.0 27 .................................... AGTAATTGGTTACTGCCCTTGCTACAG 1468030 36 100.0 29 .................................... ATATCCAAGTAATTTTCTCATTGGTTTAT 1467965 36 100.0 27 .................................... TTTACTTGTGTTGTTACTTTATAATTT 1467902 36 100.0 26 .................................... TTCCATGATCAATACAATATGTGTTA 1467840 36 97.2 26 .........G.......................... ATTGCTCTGGCCGTATCTTCTGCCAT 1467778 36 100.0 27 .................................... GGATATGGCATTTCCTAGCACAGATAA 1467715 36 97.2 0 ..........T......................... | ========== ====== ====== ====== ==================================== ============================= ================== 9 36 99.4 27 GTTTGAATAACCTTAAATAATTTCTACTTTGTAGAT # Left flank : CATGAGAAAATCATTGGTTTGTGACTTGATGGAACCAATAAGACCGGTTGTTGATTATCAGGTAAGAAAATCAATAAATCTTGGACAATGTAAAGAAAATGATTTCGAAGTTATTAATAATAGATGGTGCTTAAAATTTAAGAACAATTTTTGCAAAATATTTGTCTAAATTCGGTCACAGGATACAGTATTCGGTTTTTGAAATTGACAATAGCACTAGAATATTAGATAATATAATCAGTGATTTGAAGAATAAGTATGAGAAGAGATTTAGTCAGGAAGACAGTGTTATGATCTTTAAATTATCTTCAAGTTGTGAAGTACTAAGGTTTGGATATGCAAAAAATGATGAAAAAGATTTTATTATTATTACATAATGCAAACATGGGCTTTGATAAATTATTATTTAAAGGTTATTCAATAAAATATGAAAAAATACACAAATAAATTGTTTTTTAAGGTTATATGCTTAATAATTTGTTTAATTTGACGAATTAAGA # Right flank : GACAAGTATTTTCTTGCAGTTTTTAACGCAAAAAGTAAGCCTGATAAAAAGATAATTTAGGGCAGTGGGGATAGAAAGAGTGATGCTGATTATAAGAAAATGGTATGCAATCTGCTTCCTGGACCTAATAAAATGCTGCCTAAGGTATTCTTTTCAAAAAAGGCATAAAAACATTTAAACCATCAGAGTATATAATTTCAGGTTACTATTGTAGATGTTAATCTTGCAAGCCTTATGGGCGTGTTGAATAACCTTTAATAATTTCTATACCAACACCTACTATAACTGCATTTTACGCATGATTAGTAGGTGTTTTTTCTGCTTTTCAAGCAATTCGCAACGAAAAATCCAAGAAATAACCTACTATTTAATGGAACTTGAGTCATTTAGTATGTTTTTTAGAATATAAAACTCTTTTTTAGTGCAAAAATGACCTACGAAATTATGATGATAAGGCAATCTAGTAGGTTATTGAATAATCATGTGGTGAGTGAGCTAAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATAACCTTAAATAATTTCTACTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //