Array 1 399053-405663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHGG010000003.1 Hymenobacter luteus strain DSM 26718 Ga0415340_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 399053 37 100.0 38 ..................................... GCCATGAAGCTCACGTACCGGCAATGGGTGAAAACACC 399128 37 100.0 36 ..................................... GGATTCGTGGGCTTGCCGGCCCGCTTGGCACAGATA 399201 37 100.0 36 ..................................... CGGCCCTCAACGCCCAGCGCGGGTACACTCTCTTAC 399274 37 100.0 34 ..................................... AGAGGACATCAGGTAAGAGAATTCGGCCGCGTAC 399346 37 100.0 37 ..................................... AAACTACTCGATAGGTGAAGGTTGCGGGGGTCATGGT 399420 37 100.0 38 ..................................... GTCGGGCCGTACTACTTCGATTTCCCGCCAGTTGAGCA 399495 37 100.0 37 ..................................... TTCCGCCCGCACCCAATACAGCCCCTGCGGGCCGGTG 399569 37 100.0 49 ..................................... AAATTGTTGCACGGCAGCCGTGTAGGCGCTTGCCTCAGCAGGCGACAAA 399655 37 100.0 41 ..................................... ATCCGTGGCGGTGTGAGCATCGCCACGGGTTTTCTTCCTAC 399733 37 100.0 37 ..................................... CACGTAGTCGTTTCACAATGTTACTGGATTATTTTCA 399807 37 100.0 36 ..................................... GACGCTGGCGGCAACAAGGCCAGAAGCAAAAAGTAC 399881 37 100.0 38 ..................................... GCCTTTACGGGGGGCATAGCGCCATCCACAGGGACAGT 399956 37 100.0 37 ..................................... CTGGTGCTTATTGAAATCTTCGGGCGGGTAGTGCCCA 400030 37 100.0 38 ..................................... TCCTAGGTTGACAACGGTATAGGGATGATTGATCTTCC 400105 37 100.0 40 ..................................... CGGCTGGTAGGTCAGCAGCTGGCCCAGCAGGGCCGGGCCT 400182 37 100.0 39 ..................................... ATGTACTCCACCTGCCCGCCCTGGCAGTTCTGGCTTTCC 400258 37 100.0 39 ..................................... CCAGTCCAACACCAACTGGGGCCTGAACCTGCGCCTGGA 400334 37 100.0 38 ..................................... TTGGTGAAAAGACCAACCCGCTTCACGGCTGCCAGTAG 400409 37 100.0 38 ..................................... TGAAAGAGGCTAAAGCCTACCTGTCCCAGGCCTATGCG 400484 37 100.0 37 ..................................... TCGTTTTTGATGGCCGCTTCCTGCGCCAGGGAGGTGC 400558 37 100.0 39 ..................................... TGACGGTGGAGCGCTTCAGCGACCAAACCTCGGATGCTT 400634 37 100.0 37 ..................................... GCGAAGGCAACAACGAGCTGCGCACCCGCCTGACAGG 400708 37 100.0 36 ..................................... TTTTCCACCTCAACTTCTACCAAGGTATAGAAGTCG 400781 37 100.0 38 ..................................... ACGAAGTGGTGTACGTGCTGCGCGAAGGCGCCAACGGC 400856 37 100.0 34 ..................................... ACCGTGTTGCGCCCGGAGCAGTTGACAGAACTGG 400927 37 100.0 41 ..................................... TACCAGGTAGCTGGGAAGGTATCCACTGGCAGTGTCACGCG 401005 37 100.0 38 ..................................... CGACTGAAAGGGGCCAGCAGAGTTTTTGCCCAGTTCCA 401080 37 100.0 36 ..................................... TTCGTCTTATTCGTCTCCTTATAAGGCGACACTGAA 401153 37 100.0 36 ..................................... TGGCCGTGGAGCAGGTAGCCCAGGGCCCGCTGCAAC 401227 37 100.0 37 ..................................... TCGGAGGCAGTCAATCGGCTGGCTGAGCTGGAAGGAA 401301 37 100.0 37 ..................................... CTGGACTTGGGTAGGCTGGGCATCAGGCAGGGGTAGT 401375 37 100.0 36 ..................................... ATGCGCTGTTGCTTGGCATCCCAGTCCCGACGAAGG 401448 37 100.0 36 ..................................... ATGTTTTCAATGACGCGGATGCCCAGCTCGGCCAGC 401521 37 100.0 38 ..................................... GCGCAAGGCTCACCAGCGTAGCAGCTACCACACTCGCC 401596 37 100.0 42 ..................................... TTCAGCTCTGACTATGGCCTCTCTCACCGCTCTGGACCTGGC 401675 37 100.0 35 ..................................... GCGTAATCAAATTGCCGGTGGCAGCTACGGCACAT 401747 37 100.0 35 ..................................... TTGAATGGGAAGCATGGTACGGGTGGTAGGTAAGC 401819 37 100.0 42 ..................................... AGCAGGACTATGGCCGGAGCACGCTGGAAACCCAGCAGCAAA 401898 37 100.0 36 ..................................... CTTTTTTAAGTGCTCCAGCTAGCTTTTCGTAATCTA 401971 37 100.0 37 ..................................... AATCGACCACAAACAGCAGCAGCCACGCGGCTACAGC 402045 37 100.0 38 ..................................... AGGTAGTAGAACTGACTCAGCAGCTGCGGCACGGCCAG 402120 37 100.0 37 ..................................... CAGCAGCGACAGGGCACGGCTGATGGTTCGAATGGTG 402194 37 100.0 36 ..................................... TTGCCCTACTCGAAGCCACCGCCCTCGAAGCTGGGG 402267 37 100.0 37 ..................................... AGGCCCGCCCGGGCCGCACCCAGTACCCGGTGCCGAG 402341 37 100.0 38 ..................................... TCAATCTTGGTTTCCAGCTTACCCAGCCCTTCCACGAT 402416 37 100.0 41 ..................................... CAATCAGTTGCTCATCTTCCGTCAGCCAGGCGTAGCCCTAC 402495 37 100.0 39 ..................................... CCTTCGTAGGTGCCGGCCCAGTCGGGGTAGGTGCTCCCG 402571 37 100.0 36 ..................................... TAGTCCTTGCTGGCGTTGGCCCGGTCGCCGAGCATC 402644 37 100.0 37 ..................................... TTGATGGCCTGCTGAAAGCCCACAATCTTCATGCGCT 402718 37 100.0 37 ..................................... AGGTCTGTGATTTTTACAGAGCATGCAGCGGCCACTA 402792 37 100.0 38 ..................................... GGAAACGTTTCGGGCCAGTAGCTAATTACGTGGAGCCA 402867 37 100.0 38 ..................................... ATTCCATGTGGTAGATCAGAATGGTGTTGCCATCCTTA 402942 37 100.0 38 ..................................... TTCTGATTCCCGCCTAATACTGAGAACGTCGTCGCATC 403017 37 100.0 36 ..................................... ATGAGCAGTTCGGGCGCGGGCGTCTGGGCATAGTCT 403090 37 100.0 35 ..................................... GCATAGTCGAACTGCCGATGACAGCTACGGCACAT 403162 37 100.0 38 ..................................... GCGGATACCACGTTGCGGCGGTGCACCAGCAACTGGTC 403237 37 100.0 38 ..................................... CTGACCGCCTGGGCATAGCTGGCCGCGCGGGCGGCGGC 403312 37 100.0 37 ..................................... TTCGACTTGATTGTTGGAGTAGCCGGCCAAACGGGGT 403386 37 100.0 38 ..................................... AAGTAGTAGAACTGACTCAGCAGCTGCGGCACGGCCAG 403461 37 100.0 36 ..................................... AATCCTACCGAGAAGACGGCGGCTGAAATCCGGCGG 403534 37 100.0 39 ..................................... TGAAAGTACGCTTTGTGTTCCGGCCTTCGGAAAGCACGG 403610 37 100.0 37 ..................................... ATGCCTCGGTAAAAGAAACCAAGGAAGCCGTTACGCT 403684 37 100.0 38 ..................................... CTATAGCCTTTTCTGTATCAATGCGTAGCAGCTGTAAG 403759 37 100.0 38 ..................................... TTGGTTTTGGCATTGCTTAACACGGTTTCGTTTGGTAA 403834 37 100.0 37 ..................................... TTGCCCTACGGTGCCGAAAACGCGGTTTTTGCCTTGT 403908 37 100.0 38 ..................................... CCATTGCGGGTATTACCGAGTTTCGGGACCGGCTGCCG 403983 37 100.0 39 ..................................... ATGTACTCCACCTGCCCGCCCTGGCAGTTCTGGCTTTCC 404059 37 100.0 39 ..................................... CCAGTCCAACACCAACTGGGGCCTGAACCTGCGCCTGGA 404135 37 100.0 38 ..................................... TTGGTGAAAAGACCAACCCGCTTCACGGCTGCCAGTAG 404210 37 100.0 38 ..................................... TGAAAGAGGCTAAAGCCTACCTGTCCCAGGCCTATGCG 404285 37 100.0 36 ..................................... CAGACGAAACGACAGCTCCAGGCCCACCACGAAGGC 404358 37 100.0 36 ..................................... TGCAGGGCAGCCGCGCCGGCATTGGGCAACTGCTCA 404431 37 100.0 38 ..................................... AGCAGATGCTGATTGCCGGCATCATCCGGGCCGCCAAG 404506 37 100.0 37 ..................................... TTTCTGACTCATGGCCGCTCCCGCAGTTACCATTGAC 404580 37 100.0 38 ..................................... TCACTGAACATTGCGCCCGCAACGATCAGACCGCCTAC 404655 37 100.0 37 ..................................... TTTCTCGCCGGCAGATCCTGCCGCAGCTGCGGCGGTG 404729 37 100.0 36 ..................................... TCGAAGTGGGATACTTCTACCGTGGTCCCGGTATTG 404802 37 100.0 37 ..................................... TTGCTCTGAAATTGCACTGCCTGCAGCTGCCGGCGAC 404876 37 100.0 37 ..................................... TCTTCTGTGAGCTGGAACGGCTCAAAACCAACTTTCA 404950 37 100.0 35 ..................................... ACCCGATTGGTGACAAAATCAAGGTGCTGAGCAGT 405022 37 100.0 38 ..................................... AAGGCAGACAAGTACATAGTCCGACCAAATGCCATCGC 405097 37 97.3 36 .....C............................... ATTCCCTTGCCGGCCGGCTACCCTACCTGCTCAGTA 405170 37 97.3 37 .....C............................... TCCACGGTCCAGAGCTGCGATACCTCGCCGCCATCCT 405244 37 97.3 38 .....C............................... TGGACGACATCAAGGCAATGGATATCTGGATTCAGCTC 405319 37 89.2 36 ....AC..........A..G................. AGTGAAACAAGTACCAGTGAAACCAGAGAAGCGACC 405392 37 86.5 47 .....C...T.G....A..G................. TTTCCTACGAACGGCTGATTGTACCGCCGGCTGATACCCCCGACCGC 405476 37 91.9 39 ................AA.G................. CCGTGCCGGAATCGACGTTCGGGCTGCTGGATTACCGGG 405552 37 97.3 37 ...................G................. TGCATGAAGGAGGTACCCCAGGCCCGCGACTGATTCG 405626 37 91.9 0 A....C.............G................. | C [405628] ========== ====== ====== ====== ===================================== ================================================= ================== 89 37 99.4 38 CCTACTAGGCTATTCCGGATTGAAGACGGATTGAAAC # Left flank : ACTATAAATTTGCTGAGTGGGAGGACAGCGTGTACCAGACCTACCAAACGCAGCTATACTGCTACGCTTGGCTGATTGAGGAAACCTTTGGCCAGCCGGTGCGGCGGGGGTATTTGGTGTACACGCGCAGCCGGAATAAAGTAGTGGAAGTGCCCATTGGGCCGAACAATGTAGCGGAGGTGAAGCGGATAGCGGCGGAGGTATTGGATATTCTGGAAACGAATCGTTACCCGAAAGCAACGCGCTACAAAAGTCGTTGCGTAACTTGCACCTATCGCAACATCTGCACGCAGTGAGGAAGAACTGTATTTCCGGGTGTCAACTTATTTGGAAATTCTTTCTTTTCAAGTGTAACTACCTCACTATTATATAATTATCCTTACGGAAGATGTGCGAAAATTTTAAAAAAACCTGCTCTTTGACGTACGATAGAATGCATAATGAGCGCAGAACAAATTATACAAATACCCTGGTTATCAGCTATTTGCAAGCAGCGACGA # Right flank : CGTACCACGCTAGGTTTGCAGAGCCAACTAGGTGTATAGTCCCAGCGTGAGGTGGGTTGGGTTTCGGCTTAAGCTAGACGGGTTCTTTTGCCACAGAGCACAGATGAATTCGTGTGGTGTCAGCCCCCGCAGGGTGTTCATGCGCCCAGGTGCTTAGGGTCGAGGCCCAGCTTGTCGGCGAAGCGGCGGGTGGCCTGCTGGTGGCGCCGGGTTATCTGCTGCTGGGCGGCTTCGGCGGGTTGCCAATCGGGCCGGGGGTTGCGGTTGATGGCCTGCTGAACCTCGTGGCGCTGCTGCGCGGCCTGCTCCATGCTCAGCAGCCCGCGGCGGTGCTTCTGCTTGATAAGGGTGAGCTTGTCGCGCAGGTGTTGGGCGTTGGGGTGGCGGTCGGGAATCATCAGGGCTACATTCTGCACGAGCTGGGGGGCGGCCAGTTGCAGCTGGCGGAGGGCTACGGCCTCTTGGCTGATGGCCTGAGCTTTCCGGTCGAGGTGCTGATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTACTAGGCTATTCCGGATTGAAGACGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //