Array 1 78759-79598 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTJW01000002.1 Hungatella hathewayi strain AF19-13AC AF19-13AC.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 78759 33 100.0 34 ................................. CCTTGCGCTTGGGGCCATCTCCCTCTTGGGGGCC 78826 33 100.0 34 ................................. GTGGTATTAATTTAAGAGCGGCCCACTCGGACCG 78893 33 100.0 35 ................................. CCGTAATCTGCCGTCAAAGTATGTAATCAATTCCG 78961 33 100.0 34 ................................. TTTGGGATATCCGGTACAATTGCAGAATTGATCT 79028 33 100.0 34 ................................. TGAAAGGCTGGGATAATGGAAGATTTACTGATTG 79095 33 100.0 33 ................................. TGTCCAGATAGGTCATCCGTTGCTTCGATTTCA 79161 33 100.0 33 ................................. TTAAGGTTCCTTGGCTCCCAGCCCAATGCCTGA 79227 33 97.0 34 ......................T.......... AACGAAAATCTTAATTTTGCCGGTTGTCTGATTA 79294 33 97.0 33 ......................T.......... CATCAGTTTTGTAACCTCACCGGCCAAAGCATC 79360 33 97.0 34 ......................T.......... GGTGAGGTAAGTGGCGCATTCTCAAATCTCGTTT 79427 33 97.0 34 ......................T.......... TCTATTGCGTTTTCTTCGGCCGTAGAAATATGCG 79494 33 97.0 36 ......................T.......... ATTATGTACATCCTTGATGATAGAGGTTTTCTTGAG 79563 33 81.8 0 ...........C..........TCCC...T... | TTC [79590] ========== ====== ====== ====== ================================= ==================================== ================== 13 33 97.4 34 GTCACCTTCTGTGAGGAAGGTGCGGATTGAAAT # Left flank : ACGATAAGGAGTACAGAAAGGCGTTGAACATCTGCGGAACAAAGTCCGGGCGTGACTGCGACAAGGTGAAGGAGGCAGGCCTGACCCCCTGTTTTATTGACGGTACCACAGCATTTGAGGAAGCGAATATGATTTTTGTCCTGCGGAAACTGTACTCCGATCCCATGCCAGCTGAAAATTTCCTGGATAAGGAAATAGATCAGAAATGTTATCCGAATAAAGACTATCATACGATGTATGTGTCGGAGATTGTGAAAGTGCTTGTGGCAGATTGCCAGGCTGACTAATTGTGAAGGGATTTCGTCTTAGATAAAAGGCAGATAAGAGGGTAGTAAGCTGGTGCGAATCTGAAGTATGCATGAAAATACCGGGGGATTCGCACCGGGAAAATGAGAGAATAGGTAGAAGAAGGAAGATCGCTATTGATTTTGTTGGAGAATATTGTACAATATAGTTAATGATAGGGGGAGGGAGTGGGGGAGTTGTTGTGGAGAATTGCT # Right flank : TGACCATATGTCTTGAAATAACCATATCCCCCCCCCTTCCCCCCTCTCATCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTCTTTTTCTGATAACAATATCCTCTCTAATCCCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCCGTCTCCCCGCCGCTCTCCGATGCACCAGCACAGATCTCAGTCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCATGGCTCCTTTCAGAATGTAAATGTCCCCCTCATATACTGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCTTGTGAGAAAGGCGTTGTTCCCTTGTCATACATCAGATAGCCGTATGAATTCGAGTCCCCTGCGTTGGGATCCAGGGAAATTAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGTGAGGAAGGTGCGGATTGAAAT # Alternate repeat : GTCACCTTCTGTGAGGAAGGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 54261-56280 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTJW01000027.1 Hungatella hathewayi strain AF19-13AC AF19-13AC.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 54261 32 100.0 35 ................................ AATATACGTGATGTTCTGCAGCGCTTCCGTAAAAT 54328 32 100.0 34 ................................ AGCTTCACTTACACCGTCCATACGTAATTCTTTT 54394 32 100.0 33 ................................ ACACAGCCAGAGCATGATGCCTTTAAGTCTTGT 54459 32 100.0 36 ................................ TTCATAATCTGTTTCTCCTTGTAAAAGGCATCCGGC 54527 32 100.0 34 ................................ TCGGACTAATTTATAGACATATACTTTGCACATT 54593 32 100.0 35 ................................ CGTATACCGTCAGATAGTCTGTGGTCTCCTCCAGT 54660 32 100.0 33 ................................ AGACCTCATATGTAAGTCTTGCAAAGGCAGGAA 54725 32 100.0 34 ................................ AATAATCAGCTGTCTTAGTTCTCCACTACTCATA 54791 32 100.0 33 ................................ TTTTTGAGCCTTTAAGGATATGTCGTATTGGTC 54856 32 100.0 35 ................................ TTTGCAGTCAGATCCTGATCCTCGATAATGTCCTC 54923 32 100.0 34 ................................ CCCTATGGTTTCGTATTTAACGATTCCATGGGAT 54989 32 100.0 33 ................................ CCTCCACAAAACGGACAAGGTTTTAATTCTTCC 55054 32 100.0 33 ................................ GTGGAATTGAAAACGGAGAAGGGACAGCTTTCA 55119 32 100.0 34 ................................ ATTTCGGCATTTCCGTATCCGTAGGGCGTTGATT 55185 32 100.0 34 ................................ CTTAAATGATTATCAGGGCTATTATGATCTCGTC 55251 32 100.0 35 ................................ AGGAGGTAGAGGCCGCGATTATTCAGCGGGGCGTC 55318 32 100.0 35 ................................ CGCTATATCGAGGACGTGCGCGTCGTGAACAAGAT 55385 32 100.0 35 ................................ AGGAGGTAGAGGCCGCGATTATTCAGCGGGGCGTC 55452 32 100.0 35 ................................ TTTTTTGCAAATTGTGATACGCGGTCGTTTGTATC 55519 32 100.0 34 ................................ CAGGAGGTCTTAGAGAAAACACGGACAAATCTAA 55585 32 100.0 34 ................................ AACCCGTTGGATGGCGAAGGTGTAAGGGACACGA 55651 32 100.0 35 ................................ TTTCTCTCCTGTTGCCATCTCTCTGATATACCGGT 55718 32 100.0 35 ................................ AGCATGACCGGACGCGGATCCTGAAGGCTCTGGAA 55785 32 100.0 35 ................................ CTTCGGTCATACCGGAAATACTAAGTTTGTTTAAA 55852 32 100.0 34 ................................ TTTAGAAACTGGGTTCACAGCAAGTGCTGTTATT 55918 32 96.9 34 ...T............................ TATCGAAATACGATGTCCATCTAATGCAGTAGCC 55984 32 100.0 34 ................................ CTATAACAGGAATGTGATTCTTAAATTCCCACCA 56050 32 100.0 35 ................................ TGTGTTTCCCACTACTTCGATTCTGTAACGGCCCC 56117 32 100.0 33 ................................ GCTACCTTCCATCTTGTTATATGGTCCTCAACT 56182 32 100.0 35 ................................ TACGAATGCCGGGCGCATACCCGGCAGGATTACAA 56249 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 99.9 34 GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Left flank : AGAAGGATGAGCGATTTAACAGAGCGATATGGGGGGTATGTGGATTTTGCGGAAATCGAAGCATTGCAGTACCTCTCCGAAATGGTGCAGGAAGTATCGTCTGGAGTATATTTAAATAATATAGACAGATATTCAACCAGAAGAAATATGAAAATGGATTTAAGCGGATTAATGGGAGCTATGACGTTCCAAGGAGAGTTATCAGTATTCACTCCATGGCTGAATGCGGCCTCTGTCTTACATATAGGCAGAAATGTTACATTTGGATGCGGAAAAATTGATGTGGTGTTTGGAAATATAGAATAATCTAAAAAAACTAATAAATTATCGGGTGCGAACGTCAAGTGATCGTGAAAATGCCTGGAGGTTCGCACCTGAAAATGAAGAAATCGGAGATGAAATTTAATTGTTTTATTAGAAATAAAGTGTTAAAATAGAAATATAGACAATTTTTGGTTAGTTTGTGATAGATTGTGTTGCTGAAATTGTGCAGATTTGCT # Right flank : TTCTCATTGTTGACAATTTGAATCACCTTCCCTCGAGGCCACCACTGATTCAGTAGCACAAATATATATACTCTTAAATAAGACAGTAGATATAGTCATATATTCTGGCTGTCGTATCAGTGTAAAAAGGAGGTATTTCATGTTCCTTGCCCACATAAGCCAAGATCAAACTCGAGAGCAAACGATCGCTGCCCACTGTCATGGTACAGCACATCTTGCCGGTGATTTTGCATCTTCTTTCAAGTGTAAGGAATGGGGGTACGGTTGTGGCCTGATCCATGATATCGGAAAATATTCGGAAAAGTTTCAAGAACGTCTTCATGGAGGAAGCATCACGGACCATGCGACGGCAGGCGCCCAGGAATTATATAAAAGAAAAAATATCTATGCAGCCTACTGCATTTCCGGCCATCATTCGGGATTGCTGAATGGCGGGACTTGTGCCGATTGTGCAGGAGAAGCCACTTTTATGGGAAGGATGAAAAAGGGGCTGGAAGATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACTGATGCAGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 64078-68268 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTJW01000027.1 Hungatella hathewayi strain AF19-13AC AF19-13AC.Scaf27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 64078 33 100.0 35 ................................. TGCAGCGTGGACGGTCTGCTGGGCATGTATGGTGA 64146 33 100.0 34 ................................. CCTCCGCACCATCTTTGGCAATAAATCTAATTCT 64213 33 100.0 33 ................................. CCACAGTACGGCTTCCTCAGCTACACCGCTCTT 64279 33 100.0 34 ................................. ACCGACAAGAGCGTGAACGCTTACAACGCCTACA 64346 33 100.0 35 ................................. CCTCTCGAGGACAGAGACCTATGAGCAGCGCTCCC 64414 33 100.0 35 ................................. ATCCGAACACTCAACAATGTCGACAAGCAAATGAG 64482 33 100.0 34 ................................. ATACCAGCCTCAATTCCGTATAGTTGACAGTACC 64549 33 100.0 33 ................................. ATCTCGACTTCACCGGTCTTTACCGCTCCAGAT 64615 33 100.0 35 ................................. TCCATGTCGGAAGTGCGGGGGCTCACAAAATCAAA 64683 33 100.0 34 ................................. TTATCGCTGTGCTGCAACGTTACAGTTCACAGCC 64750 33 100.0 35 ................................. AGTGACGGGGGAGGGCGGAATTACTGTAGAGGACG 64818 33 100.0 34 ................................. CGAATAAATGGCGCAGTACCGGTTAACGGAAAAA 64885 33 100.0 34 ................................. CTACGCGTAGTGTATATACTTTTAGGTTAGACTG 64952 33 100.0 34 ................................. ATCAGTTCCGCCTTCGTCGGAGTCTCTATATGCT 65019 33 100.0 33 ................................. TACTTGCAGGATAGCTCATAATGCTGCATGGAC 65085 33 100.0 34 ................................. ACTGAGCCAGGAGGAAGCGTTTAAACCTGCAGGA 65152 33 100.0 33 ................................. CTCCTCGTTTTCTGTTTGTTTTCCTGTTCCTTA 65218 33 100.0 34 ................................. CTTGAGGACGGATACCAAAGCGTATGGGAGTTTG 65285 33 100.0 35 ................................. ATGTTGACTTGGTTAAAACTCGTACCCGCTTCAAT 65353 33 100.0 33 ................................. TCCGTAATAGCCAGGCCCTTGATCAGGAACTCC 65419 33 100.0 35 ................................. GTGACCATCAGCGCCCCGTACGTTGCCATATCCGC 65487 33 100.0 34 ................................. TCCCGGTCCCTCTGGCGTCTCTGGTGCTGTGTAG 65554 33 100.0 34 ................................. CCTGCAATCAGCCGGTTGCGATCCACCGCTATGT 65621 33 100.0 34 ................................. TCTCTGACGACAAACTCCAGCTCCGTGCATGGCT 65688 33 100.0 34 ................................. CCACTTAAATAAGCACCAGCCGCAGCCAGTGCTC 65755 33 100.0 34 ................................. ATGTCTGGCGTGTTCTTCATCATGGTCATATCCT 65822 33 100.0 35 ................................. TTCCAGAAGCTGAACGAAAAGCTTTACTTTTAAAA 65890 33 100.0 34 ................................. CTTCTGCTCCAGTTTTTGAAACAAATCTTAATCT 65957 33 100.0 35 ................................. AACTTTGTATAACGTTACCTTTGTAGTGGCATTTG 66025 33 100.0 33 ................................. CAGAATCAATTTGCATGTAAATGTTGACATTAT 66091 33 100.0 33 ................................. ATGTAGGAGCAAACCTTAAGAGGATACGAGAAG 66157 33 100.0 34 ................................. TTGACAACAACAGCACGATACGCTCCAGCCAAAA 66224 33 100.0 35 ................................. ATTTTACCATCAACCGCAAAATCCCCGCGCCGATC 66292 33 100.0 34 ................................. ACAGTAATGCCATTTTTAGTATCGTTGAATTGAG 66359 33 100.0 33 ................................. TTAAGTGCGGTCATGGCCGCCTGAAGGGGTAAA 66425 33 100.0 34 ................................. TAAGAACTCTGCTGTCTTCCCAAAGGCAACGCAG 66492 33 100.0 33 ................................. ATGTAGGAGCAAACCTTAAGAGGATACGAGAAG 66558 33 100.0 33 ................................. TAATGTTACTGGCATACATAGTCCTCCTTAATT 66624 33 100.0 33 ................................. TTTGAACTGCTTTAACTTTGGAACTATGATCTT 66690 33 100.0 33 ................................. TCTTTGGCCGCCGTGTTCTCCACCTGGAGATCC 66756 33 100.0 34 ................................. AGCATTGACCATACCCTGCACGATAGTGTCAGCA 66823 33 100.0 33 ................................. TGGTTACTACATGCTTTGATCTTTCAAAGTTGC 66889 33 100.0 33 ................................. TATCCCGAAGCCGGAAGGCGGCGAGGAAATCGC 66955 33 100.0 33 ................................. CCGTGTAACCCCTACAATAGAGCTTGCCAAAGT 67021 33 100.0 35 ................................. CAAAAAGGCAAGAGCATAATTGAATCCGCTGCTCC 67089 33 100.0 33 ................................. CGAAGGGAGCCACTGGTGCGGCAGGAGCAAAAG 67155 33 100.0 36 ................................. ATTAAAAATAAACCAGCCTCTATGCCAGCATCTGAT 67224 33 100.0 34 ................................. CTATTTTACCAATTTAGAAAGGAGTTCGTGCATG 67291 33 100.0 33 ................................. GTGAAGGTATAAACATAGGTGGATTAAAGGGTA 67357 33 100.0 33 ................................. AGCAGGTAAGAGAACTTGCTCCTTGTACATTAA 67423 33 100.0 34 ................................. TCAATCGATCAAGAAGGCGTTTTTTATTGCTCAG 67490 33 100.0 35 ................................. AAAATAATTTATATCGCGGCCTCTCCTCACCCCAC 67558 33 100.0 35 ................................. ATGCTGGCGCGTCCTCCTTTGAGGATCGTTGCCTT 67626 33 100.0 33 ................................. CATGATTAGTGAGTGTCGCGGCCTTTGCTATGT 67692 33 100.0 37 ................................. TGGTGTGTCCGGTTGGGATGGGTCTGCATGTTTTGCC 67762 33 100.0 34 ................................. CATCACCGTCATTACAAAATTATCTGTATTAATC 67829 33 97.0 35 ..................A.............. CTTAAGCTTCTGTGCCGCTGTCCTGCCGTCCGCGT 67897 33 97.0 35 .............C................... AATATCACCCACATTAAGTGCTACCAGTTCCGAAA 67965 33 100.0 35 ................................. TCGGAGACGTTCGATTTCTTTGACGGCCTTCACAT 68033 33 100.0 34 ................................. ACTTTGAAGGAGCTCTGGGGCATGGGCTTAACGG 68100 33 97.0 35 .............C................... TCGCTGGTACTTAATCATGGCATCGTTGTATTCAG 68168 33 75.8 35 ....T...C...A..AT.A...........GT. ACACCCGCAGCCATGAACATCTCAGTTTTGTAGAT 68236 33 75.8 0 ..T.....C....C....A.T...C...T...A | ========== ====== ====== ====== ================================= ===================================== ================== 63 33 99.1 34 GTCTCCGCTAGCGATGGCGGAGTGGATTGAAAT # Left flank : TCCGCCATTTTTCTGGAAGTAGGAGGCGTTTCTCTATGCTGGTGCTGATCACCTATGATGTAAATACCGAGACCGCTGCGGGAAAGACGAGATTGCGTAAGGTCGCAAAGCAATGCGTAAACTATGGTACCAGGGTACAAAATTCGGTATTCGAATGTATTGTGGATAACGCCCAGTGTGTGATGTTAAAAGCGGCGTTGAAGGACCTGATTGATGTTCGTGTTGACAGCTTGAGGTTTTATTATCTGGGCAACAAACATGACACGAAGGTGGAACATTTTGGTGTCGAAAAAGGTGTAAATGTAGAAAAACCTCTCATTTTCTAGCCTGTGAATTACGGTGCGAACCAGAAGTGATCATAAAATCCCTGGGAGGTTCGCACCGAGAATTTTGCGGTTATGGAGGGGAAATGGGAGAATTGGATGAGTTGATTCGATGAAATGTGTGCAAATTGCATATGATTATTGCTGATTGTATGGTGTAATATGTGCGAGTTTGCT # Right flank : ATCGTAAGATTATTGCAAATATGAACCGTTGAGGGGACTACATCAGTAATGGCAGAGTGTATTAGATTTACGCAAAAAATCAGTTCTCAGACGATAAAAGTAAATAAATAGATTGAGGAGAGCAAAGAGTGAAGTATATTTTTATACATGGACTTGGACAGGGACCAGATAGTTGGAATAAAACAGTTTCCTGCATGAGAGAACAGGAAGAGATTCAATGTCTGAACGTATTTGCATTTAAAGAGGAATCAGAGATTTCATATAAAAGAGTATATAAGGCTTTTTCGGCGTACTGTGAGTCTATAAAAACGGAGTTTGGGCTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCGTTAAATTATGTAATGGAGCATCCGGGAAAGGTAAAGTCACTGGTCTTGATAGGGGGACAGTGCGTGATGCCGAAGGGGATTTTAAGATTGCAGAATATGATATTTCAGTTGATGCCGAAGGGGATTTTTAAGAAAATGGGGATAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTAGCGATGGCGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //