Array 1 135-368 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLB01000029.1 Geobacillus sp. MR NODE_29_length_48401_cov_164.998, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 135 36 100.0 30 .................................... TCGAGCAAGCAGAGATAGCAGAGCGGTTAC 201 36 100.0 30 .................................... ACTTTCCACCACCTCAATTACTTGCAGTTT 267 36 100.0 30 .................................... AAGAGGCGGTCAAATGAGCGGGAGAAAATT 333 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : TTCCGCTCTTGAATATGTATCGCCATGTGAATTTGAAGCTGCTTACTACGCTAATCAGAGAAAGGTAGCTGTATAAATTCAGCTATTTCTCTCTGTTTAACGTGTCCGTTTTCTTGACATAACACCAGTCTTTTA # Right flank : CTGATGTGCATACTTTTCCTCCAGGTACTTGTAAGTTTCTACATAGTTGATTAAAGTGATTTTTTACGTAATATATATCTTATTTCGCCCCTCATAGGTACGATAAAAACGGAATATAGCGTTTACGCTCTTCCGTTTCAAAATAGTTTCAATCCCTCATAGGTACGATACAAACTGTGTAGCGAGGATCTGGCTGAGCGTTTGCGTAAAGGTTTCAATCCCTCATAGGTACGATACAAACCCCCAAAAAGTGCTGTTATATCAAGCTTTTTCATCCCATGTTACCTTCAGAATAACACGGTCAAAAAATTCTGTCAATCACGCTCACCCGTGATAGCTGTAGGAACCAAGTGACAAAAACAAATGTCGTCGACCCCCTGGGGTTTTTGCACGATTGGAGGTCGACGACAATAGAGGAATCGAATTACTTACCCGTTAGGCAGAACATGCCGAACCCTTGGGAATTTCGGCTGCCCAGGCCAACGTGGTATAAAAACGTC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 27026-27209 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLB01000001.1 Geobacillus sp. MR NODE_1_length_166175_cov_141.397, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 27026 37 100.0 37 ..................................... ACATCTAAGCGGTCGCAATTCTTCACAATAATAATCG 27100 37 100.0 36 ..................................... TATTCTTCCGCAGATAGACCCTCTGGAAGATTGAAG 27173 37 83.8 0 ...........G.............A......CT.CT | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 94.6 37 TGTTGAAAGAGAAAGGCCTCGTTTAGAGGATTGAAAC # Left flank : ATATTATTACGAGGGACAGTTCTCACTTTCCGCAGGGAACAGTAGAGGAATTGATGCATGAATTGCTTGAAAGCAAACGCCATTTGGCCGAAAATGTCATTATTCCGTTTAATATAAGCGAGATCCAGCAGGCAGTCGCTGAGAAAGTGGTGGAGCAAAGGCAGCTTGTGTAAAGAGCGAGCCACGTCGGTGGTTATATAGATGCTGTGCTGTCCCATTGTCTGTAATCGAACATGCCGCCTTCCCCGCCAATTCGGTTCGTTCCCGTGCATATGGCGCGGTGTACGGTCCAAAAACAGCCAAAAAACAGGGGAGGTGTGCATGGCGATTTTTCTTTCGTAAAACGAAACATGATCTTGATTTATCAATGGGTTGGATGGTTGACGTTTTTGGTCAGTCGTACAAGTTGACATAACCACATTTTATTTTTTGAGGGGGTGGAAGGGGTGTGCAAAATGGCCCCTTGCCGCCTTAGAAAATCAATGGTAAAATGAAGGAGC # Right flank : TCCCCCGCTTCCGTTCGCAGGAGGCGGGGGGTGTTTTTTGGCTAAGAATTGAGGCAGGAAAACCGTTTGCCATGGCGAAATATTGGAAATACGATCTCTTGTTGGTGGATAAGAAGCGCCGCCGACAGGGTGGTGTGGGAGAGGGGGCGTGCTATGGCAAACGGTGGCAGGAGAACAAAAGGGGCAGTGAGCGCGAGGCTGGAGCGGGTCAAAGAGCTTTTTCCGGAAGTGGTGGCAGGCGAAGCGATCGATTGGGAGCGGTTGAAAAAAGAGCTTGGTTACGAAGAGCAAGACGAAGTGTACGGATTCACATGGCCGGGGAAGGCGGGAGCGAAGCAGTTGGCGGAAACGCCCGCCATCGGAGCGCTGCGGCCCGACCGAGCGGCAAGTAAGCGGTGGGAGACGACGAACAACTGGTATATTGAAGGGGACAATTTGGAAGCGCTCAAGCTGCTGCGAGCGTCACATGAAGGAAGCGTGCAAATGATTTACATTGACCC # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTGAAAGAGAAAGGCCTCGTTTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 1 6149-5652 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLB01000047.1 Geobacillus sp. MR NODE_47_length_27358_cov_157.535, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 6148 30 100.0 35 .............................. TTTCCTCATCGAAAAACACTCGCTTCAACCAATGC 6083 30 100.0 37 .............................. TGAATCATGAAATACGCATTCGCCGGGATAATCACTC 6016 30 100.0 36 .............................. CATAGTCCACTACATTTCCAAAAGTAGTGCGAACAT 5950 30 100.0 38 .............................. CCGGCAACGCGTATGTATGGTGCCGGTACAACGGTCCG 5882 30 100.0 37 .............................. ATACGAGGGGTTGATATAGAGATAGGGGGACATACAA 5815 30 100.0 38 .............................. ATTGGCGACTTGTTGAAAATGCAGGTGATTGCAGATGA 5747 30 100.0 36 .............................. AACGACATGCCAAGCCCGGAAGCAACCGCCGACACC 5681 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 37 GTTTTTATCGTACCTATAAGGGATTGAAAC # Left flank : GAACCAACAACGGGACTTGACGAGGCGAGGCAGCGGCGGTTGTTCGGACTGTTCGAGACGTATTTGTGATTATTTGAGGAAGAGGAGCGCCAATTACGAAACGAGGTGAACCAATGGAGACAAAGGAAGCGAAACAAGGAATGGAGTGAATCACCTCGTACGAGCAGCAAGGAATCGAGAAAGGAAAGGTGGACACCGCGAAACGGATGGTGGCGAAATGATGCGACGTGACGGCGATGGGTGAGCTGCTCGGATTGCTGATGGAAGTAGTGGAAAACAGCAAAAGGAAAAGGCTCATGTGAGGGCTCGAGAAAGCAAGAAGCGAACTTCGTTTGTCGTCGACCTCCAATCGTGCAAAAATCCCAGGGGGTCGACGACACTTATTTTTGTTGCTGATTCCCTACAGCCATCATGGACGAACATGATTGACGGAATTTTTCGACCGTGTTATTCTGAAGGTAACATGGGATGAAAAAGCTTGATATAACAGCACTTTTTGG # Right flank : GATACTGTAAGAGTATACAGTTTATCGCCATGCCTTGATTGACGAAGTGGTGGCGGAAATCCGTCGGCTAAACGAAGAAAACTTCCGCGTACGCCAACATATCCCATATGTACACAAGTTCCAAAACCGGGAAGCATGGAACTGTTTAACGGCGATGGATGTCAATGAAATCAAAGAACATCTTGCACCGCTCATTGTTCCGCTCAACGATGATGAACTGGCCAAGCGCTTTGATTTGCTGATGTATACAGTTGAGTTGGCGAAGTTGCAAACAAAAAATGCGACGAAGCCAATTCGGAGCATGATTCGCACCACAGAAGCGTTATCTAAGCTCGGATCGATTCCGCAAGTGCAGGAACAAAAATGCATCATCGAAAAGGTGTAGACGGAAGAGTTTTGGAGCGAAGCCGATAGTTTTGAATTGGAAGCTGTTCGCGAAGCGTTGCGCGATTTAGTGAAATTCCTTGAAAAAGAAACGCAAAAAATTTACTATACGAACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 32868-31709 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLB01000036.1 Geobacillus sp. MR NODE_36_length_39308_cov_138.228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 32867 30 100.0 36 .............................. ACTGATTTGTACTGTAATCCGCTTGAGTGCTTCCTC 32801 30 100.0 37 .............................. CAGAAAATCGCCAGTGTAATCGATCAAAACTGTGTCT 32734 30 100.0 38 .............................. GCAGTAGCAAGATGCCAAAGATGACGAAGAAGATATGC 32666 30 100.0 36 .............................. CCTGTATAACTTTCTGCAATTCCACCGTGAATAAAC 32600 30 100.0 36 .............................. AGCTTTGTAACTGCGCCTTCCGTAATGTCATCGGAA 32534 30 100.0 35 .............................. GTAACTATTAGAAATGCTATAGCATCAATAAAACC 32469 30 100.0 38 .............................. TATAGCCGCAGATAAAATGGCAGTTGGGACAGCCACAG 32401 30 100.0 35 .............................. TTTTGTTGTGTAATCTTAGTTGTAGTTGTCACTGT 32336 30 100.0 36 .............................. CCATCGGCAATGCATTGGCACCCGCGATTGAAAAAG 32270 30 100.0 37 .............................. AAGGAGCGAGCAGACGCGAGCGACGGAAGGGGGAGCG 32203 30 100.0 35 .............................. ATAACATCCGCGTCCACCGCATGGCCAACAGCGAG 32138 30 100.0 36 .............................. CGCTCAACGGTACAGTGTTGACTATCGGTGATTTGT 32072 30 100.0 35 .............................. AAGATTCATCTGCTGTACCAACCAACAAAACAAAA 32007 30 96.7 37 .....A........................ TCAGCAAATCCTAGCGGCGTTAGATCCAGAAGCGACC 31940 30 100.0 39 .............................. GCGGAACGGGCGAGTGATTGGGTAGACGCGATCACCAAC 31871 30 100.0 39 .............................. ACTGTCTAATGTCTCTGGGATTGTTTGAAGGTAGTTAAT 31802 30 100.0 34 .............................. TTTGACGAGCATCCTGAAGTGGCCTGAGGGTTGA 31738 30 73.3 0 A................A...AG..C.CTT | ========== ====== ====== ====== ============================== ======================================= ================== 18 30 98.3 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TTCCGATGACATCGTCCGCGTCGCCCGTTCACCAATCCGCAAGCTCGGGCCGAACGATCGGCTTGTCGCACCGGCTGTGCAATATTACACTTTATTCGAACGTGTGCCGTCCGGACTTGTCAAAGGCATTGCTGCGCTGCTGTTGTTTGATGAGACCGGCGATGCCGAAGCAACTGCTCTCCAGAAAACGATCGAACAGAGCGGTGTCGAAGGGGCGCTCGTCCAATATGCCGGGCTTGACAATAGCCATCCGCTCGTCGTGGCGGTGAAGGAAGAATATGCTCAAATGAAGCAAATGTATTCGCGTTAAACTCAGATATCCTCTCATATTCTGTCGTCGACCTCCAATCGTGTAAAAATCCCCGGGGGTCGACGACAAGAATTTTTTATACTGAAATCCTACAACCATCAAGCATTGGTATTATTGACATAATTTTCGGAACGTGATATCTTGAATGTAGCCTTGGAAGAAAAAGCCCAATATAATAAGAATTTTTGGG # Right flank : TCTTTCGTTAGCTTTGGAAGCCAGTACGGCTAGGACATTTCCATCAAGGCGGCTGGGACGGTACGAGATGAAAGGCTGCTTGCGTCGTGGAACTGAGGAATTCTTGCTTTAAGTAAAGGGAAAAGGGAGTTGTTCCCCGATTATTTCCTTAAGAATTCATACCTCATCTTATCTTCGTTTTTTATATTGATGAAAAAAATATTGTAAACCGCTTTCACTTGTTTTATAATAAAGCTAAACCGGTTTATGAAAGCGCTTTTGAACTAAATCGATTTAGTACAAGAGAGGGATTCTGTTGAAAAAAGTAACGATGGCTGATGTCGCGAAACTGGCCAACGTTTCCAAAAGCACGGTCTCGCAATATTTGAATAAACGCTATGAATATATGAGTGAAGAAACAAGAAAGCGCATTGCCCAGGCGATCGAAGAACTCGGCTACCAGCCGAACGTGATCGCCCGCAGTTTGAAGCAAAAGACAACAGCGACGATCGGCGTCATTG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 4905-5468 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLB01000081.1 Geobacillus sp. MR NODE_81_length_5621_cov_154.034, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4905 36 100.0 30 .................................... TTTGTACGTTTACGAGCAGCCATATAAATT 4971 36 100.0 30 .................................... TCTTAACGAGTATTCGACGAGAAAGCTACA 5037 36 100.0 30 .................................... AACTTCGCTCATTTCGATTCCTCCTCTTTT 5103 36 100.0 30 .................................... AACTTCGCTCATTTCGATTCCTCCTCTTTT 5169 36 100.0 30 .................................... TCCGTTCTCAAGCTGTACGTCTGCCAAGCT 5235 36 100.0 30 .................................... CAATTAGACAAGATATTGATTTAGTGGCTG 5301 36 100.0 30 .................................... AGGAACACCGTATATGTTCTATCGTGATGA 5367 36 100.0 30 .................................... CAATTAGACAAGATATTGATTTAGTGGCTG 5433 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AAGTTTCGTCACTGCAAGCCGAAGCCAAGATCCTTCGCTTTTGAAATTGCCGGAACTTCTTCCGTTGCAATTGCATGTTTATGAGTAAATTTATGAGATTGCTCGTCTTTTTTGACCTACCCGTTGTGACCAAACGGGAGAAGCGCGAATACCGGCGATTTCGTACATTCCTACTAAGCGAAGGATATGATATGTTGCAATTTTCGGTTTACAGCCGTGTTTGCCATGGACATGAAGCAACAGACAAACATTTGGCGAGATTGAAGCAGAATCTACCACCTCAAGGATCCATAAGGGCAATGGTCGTAACGGAAAAGCAATATGCAAAAATGCAACTGCTTCTCGGGGAACCAACAGTGCAAGAAAAGAAACTCACATCCACACAACTGACGCTTTTTTAAAAAAACAACAACAGTTCCCCTTTTTCAAGCAACACCGTTTCGTTTTTTTAAAACAAAAAAGCCTGCGATCCTTGAGATTGCAGGCTTTTTTGGACATGT # Right flank : TGACATGCAACCCGTTTACGTTCATGTGATGTTAGTCTAAAAAGTGGACACGGAGAACAGAGAGATTATAATAAACTTAATTACAATCAGTTCGAGGTGTCCAATCATGAAAAAGAGAACATTTGATCAAGAATACAAGATTCAAGCCGTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //