Array 1 77471-80120 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEQJ01000007.1 Haloferax sp. Atlit-6N P_contig000007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 77471 30 100.0 35 .............................. CTCCAATACCCCAGCTTTCCCGTCGCAATCGAGTC 77536 30 100.0 37 .............................. ATGGGAGTGAGATTATCGTCCCGCCGGAGAACATCGT 77603 30 100.0 34 .............................. AGGCTCAGCGGTCAGAAGTCAGGAGAAAAGCGGA 77667 30 100.0 37 .............................. TTGGAGAGTCGAAATGATTCATATCGCCGAATACGGT 77734 30 100.0 34 .............................. CTCGGTGTCGGCGGCGGACTCGCACTCAGCGATG 77798 30 100.0 34 .............................. TCACATATAATTAGGGGTTCAGATTAGTTAGAAG 77862 30 100.0 37 .............................. AATCAAGACCTTCGGACAGTCGCCACCGAGGCCGATT 77929 30 100.0 35 .............................. GCCGTGACGGTCGGGCTCCCGGACGTGTCGACCGA 77994 30 100.0 35 .............................. AACTTTCTCGATCTCCACTGGGAGGAACCGGACCA 78059 30 100.0 34 .............................. ACTCCGAACCGAGCGAATCTCGCGAGTAGGGACA 78123 30 100.0 36 .............................. GGGATGCTTTCGCGTTCCGATGACCGCTTGGACCGG 78189 30 100.0 37 .............................. CTAAAAAAGAACCCCGGTTCGCTATTCGAACAGGGTA 78256 30 100.0 36 .............................. AGCGTCGGAGTATCTGGCACGAGAAAGCGACCGGCA 78322 30 100.0 35 .............................. GGACATCGACGACCCCGTCTCGACAATATCGGCGT 78387 30 100.0 37 .............................. CCTCACCGTCAGAAGGCCCATCACCATCTTCGTTGGA 78454 30 100.0 37 .............................. TCCCCACAGTCGCTCACAGGCGTCCGGGTGCTCGAGG 78521 30 100.0 36 .............................. TTGGTGCCGAACGCATTACTGTCACAGAATGTGCAT 78587 30 100.0 35 .............................. TTCGCGTAGTACGGTGCGGTCTCGTTTATCGTCGT 78652 30 100.0 34 .............................. ACGCTCGGTCGGGGGACGACCGTCGACGAGGCCG 78716 30 100.0 37 .............................. CTCACTTGCGCTGTCGTGCCAAACACGATTCACGCTA 78783 30 100.0 33 .............................. GATAGCGTCGCTCGTCCCGAGGGCGCTCGGGAT 78846 30 100.0 33 .............................. GAGGCCATCGGCTGTGTGATCGACGACAAAGCG 78909 30 100.0 36 .............................. GGTCCATCGGGTTCATCGGCGTGTTCTTCGCGGCGT 78975 30 100.0 34 .............................. CGCGACTTGCGATATGCCCTCGCTCGCGCCGATG 79039 30 100.0 35 .............................. TCTCGACCAGCCCGAGGCAACCGCCTCAAACGCCC 79104 30 100.0 35 .............................. ATAGTATCAGCGTCCCGTTTTCGACAGATTCGAGC 79169 30 100.0 34 .............................. GATGTTCTCCGGCGACGGATGGTCCGCCTCCCGA 79233 30 100.0 37 .............................. GCTATAACAGCCACCCACCGACGGACGGAGGTACCCA 79300 30 100.0 37 .............................. ACCTCTCTCCAAGCGGGACCCAACGATATCGACTCAT 79367 30 100.0 37 .............................. TCCATGTGGTACCATTGGCGTTCGGGTATCTCCGAGA 79434 30 100.0 35 .............................. GTTCTCCATCGCCTCGTGCATGGACTTCCTGACGC 79499 30 100.0 36 .............................. GCCGACAAGTGGGTCGATAGCCCGCGGTCGACAGCG 79565 30 100.0 34 .............................. ACCGTCGACGAGCACCGCGACCTCTTCGAGTCGG 79629 30 100.0 37 .............................. TCCAGGAGCCGTCGGTCAACGTTGACGTCGGGAGCTT 79696 30 100.0 37 .............................. TCCAGGAGCCGTCGGTCAACGTTGACGTCGGGAGCTT 79763 30 100.0 38 .............................. GATACTCCAGACCGCGCTTCAAGTCCCAGACGGGCACT 79831 30 100.0 34 .............................. GAGGAATCCGGGAGCATCGCCAGCGACGCCAGAC 79895 30 100.0 34 .............................. CTCCTGTCTTCGGAGTGGGATGACCTGCCAGAGG 79959 30 100.0 38 .............................. GAGTCCGGTGAACGGTCTTTCACGGGCGCGGTCTTCGA 80027 30 100.0 33 .............................. GGAACTCAGTGGTGACAACGATTGGCATTATGT 80090 30 86.7 0 ....................A.A..T..A. | C [80117] ========== ====== ====== ====== ============================== ====================================== ================== 41 30 99.7 36 GTTTCAGACGAACCAAGCTGGTGTTGAAGC # Left flank : GGCAGCGCGGGCGGACGGCGACGCCGTGGTGGGTCGCGGTCGATGAGACCGCTGTCGAAATCAACGGCGAGTGTTCTTGGTTGCACGCTGATTGACCTCGACACAAAAGTAATTCTTAACGTCGCGCTGTTCAAGCGTCATGGAACGGATCCAGCAGCTGCATTTCTTCACGGAATCTGTGAGAAACACGACTGTTCAGAGACGGTGTTTCTGGCTGATGCCTTCGAATATCGAATTGCCTTCTCTCGATTAGGTGTGAACAGTCGGGTTGACTACACAGATCGATGCCTGATTGAGAAGTGGTTCCACACGTTCAAGATGCGAGTTGACCGTTTCCACGATTCATGGATGGGCAGTTGTCTGAGCGTCCGCCAGTTGACTAGACAGTGCTGTGAAACACTTTCCATCGACCTATTTAAATGGACCCGCTACTGGAGGTTGACGGGAAATTAGGCTGATGAACAACACATATACGGCCTGAGTCTGTGATTTTCGACGGG # Right flank : CTCCACATATCCCTGCTCAATCGTCTCACCTCTCGCCGAATCACCCAGATTATAATCAGCAAGCTTCCGCAGGTCACGCCGAATCGACCGTGCCGTCCGTTCATTATCAGGCGCTTCCAAGTACAGCGGCCGCAACTCACCCATCATTAGCGCTCGTGCCCCCGCACAATTTTCAAGAGCACGACTCGTGCGTCTTCAATTGAATTGACGCCTTCTTCACTAACTCGCCGCAAGCTATCAGCACGTCCCCGTTGACGAACTCGACACTTGGTGCGCTTCACACCCCCCCCTCGAACACCGACACGTCCACGTCTTGAAGGCAAGAAGGAACGCTACACTGTCTTGCCCCGATTATCCTAATTGCCTCACAGCATTGCTACTCTATCGCTCAAATGCCGCTTCCAACTTCTCATACATCCTTCTTCGCCGAGCTTTCCGCTCTTGCTCTCTCGACAGGTAGTTACGAAGAACGACCTCCGTCGACGAACTCCCCTGGTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCAAGCTGGTGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //