Array 1 937401-930515 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064787.1 Halapricum desulfuricans strain HSR12-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 937400 30 100.0 34 .............................. TCAACTGATCCACAATGAAGGACACAACCAAATC 937336 30 100.0 33 .............................. TTCTCGATCAAGTCTTCTTGCTGTTTGAGCAGC 937273 30 100.0 35 .............................. AACGCGTCCTGGACTGCGGATGCGAGCGAGGCGGC 937208 30 100.0 36 .............................. AGTGACATCGGAGTGGGATTTAGCAGTTGAGACCAT 937142 30 100.0 37 .............................. GACCGCCGCGGCGCACCCTTCCCGATCCCCCACACGA 937075 30 100.0 36 .............................. GGGAATGTCGGCGCGGAGGTCACGATCGACGACACG 937009 30 100.0 35 .............................. GACGCGCGTCGCGACGGCCCGGTCTGTCCGGTCTG 936944 30 100.0 36 .............................. AAGTGGCCGATCGTCCTCACGGTGATCGCGGTGATC 936878 30 100.0 35 .............................. CGTCAGCAGGGACAACGAATGCATTAGCTGTGGTG 936813 30 100.0 34 .............................. GCCTCACCCGGTGCAAGCGCGGGATTCTCAAATT 936749 30 100.0 35 .............................. AGGCCCCTCAATTAGTCTGTTCGGCACAGTGATTG 936684 30 100.0 36 .............................. AGTCCGAAGAGTGTATCCTGTGATTCAGTTCCAGTG 936618 30 100.0 35 .............................. GGGATTTAACAGTCCGGAATGTGGATGCCGGTGGG 936553 30 100.0 36 .............................. GCGTACAATCCGGGACCCGAACCCGCAACGATCCGC 936487 30 100.0 35 .............................. ATCTACGGAGAACCCGGCTCGGGTAAAACCCGATC 936422 30 100.0 35 .............................. GAGGATCGCGAGGGGCGACCGCCGGAGACGCTGGC 936357 30 100.0 37 .............................. GGCCCGACGCTCCGATTTGATGATGGCTTCGACCCCG 936290 30 100.0 35 .............................. GCGACCGCGACCGTGAACAGCGTGATCGAGACCGC 936225 30 100.0 35 .............................. ACGTTTCAGCGAGTCCTTCAGCGTCAAACACGCTT 936160 30 100.0 37 .............................. TCGGGCGAGACGGTGCGGGTGGCGGTCATTGACGTCG 936093 30 100.0 36 .............................. GCTGGCACGCGCGTCGCCATGTCGACGAGCTGGTCA 936027 30 96.7 36 ...A.......................... TCAGTGTCGGGGTGACAAATCGGGCACACGTCCATT 935961 30 100.0 36 .............................. AGCGGCTCCAGCGGAGAGACGACACTGACGCTCTGG 935895 30 100.0 35 .............................. ATCCCGGAGTCGTGGGTTCAATTCCCACCGGCCCA 935830 30 100.0 36 .............................. GTTTTAGTATGCCGTCAGATGACACCCCACCGAAGC 935764 30 100.0 36 .............................. AATGTGGTCATCTGGGCCGCGGACACCTACCCCCGC 935698 30 100.0 36 .............................. GGCTCGCGATCTTCGAGTGGTGTGCGCTCGAACGTG 935632 30 100.0 36 .............................. CTTCGACGTGCCGCCGGGCGACAACGCGCTCGAACG 935566 30 100.0 36 .............................. GAACATCCGACCGGAGCGGCCGATAAACCGCTCGAA 935500 30 100.0 35 .............................. ATCGACCGCGCCGCCACCGTCGCCCGTGACCTCGC 935435 30 100.0 36 .............................. GTCGCGGTGAAACTGCTCGGCGGGCTGGGGAGTTCG 935369 30 100.0 36 .............................. ACGCTTGAGGGGTTCGTGTTGACCCACAGTCCGACC 935303 30 100.0 35 .............................. ACGAGCGCGCGGTCACGGTAGGCGACGGCCGTGTC 935238 30 100.0 35 .............................. TTGACCCACTTCAGGCAAGCCAACTCAACGTTACT 935173 30 100.0 36 .............................. GGCGACACGCTGCTGCAGGACGGCGCGACCGACGAC 935107 30 100.0 37 .............................. ACGTACCAAGGCAGTCGGAATAGTGAATCCGAACAAG 935040 30 100.0 36 .............................. GTCTTGGAGCCGGTCAACTGGCCCGCCACTGTCGGA 934974 30 100.0 35 .............................. ACCAAACCGTTCGCTACCGCGCGGTAGGACTTCTT 934909 30 100.0 35 .............................. TCACTGCCGTCTGAATCGACTTCCAGCGCACTGGC 934844 30 100.0 35 .............................. CGCTCATGGTTGAATGCTGATGGTCGTGCCACAGC 934779 30 100.0 36 .............................. GGCCTTCCAGCGGACGATCTTCAAGCGAGCCGTCCA 934713 30 100.0 35 .............................. AGCTTTACTGCTCCGGGCGAATTGGAGATTCGCAA 934648 30 100.0 35 .............................. CGCTGATACGGCGACATACTCGGTCGGCGCTCCGC 934583 30 100.0 35 .............................. CTTTGCGCGTTCGGCGGGGTCGCTTGTGTATTCTT 934518 30 100.0 34 .............................. GACCGATTGCCCTTCGGGTAGCGCATGACGGCCA 934454 30 100.0 36 .............................. AGGACAGTCCCGGCGGCGGCAATTCGTTCGAGTGCG 934388 30 100.0 34 .............................. ATCTCGGGTACGTCGTCGCGGCCAGTCCGGGACG 934324 30 100.0 34 .............................. TCCCCTTGGTGAAGATGGCATAATCCTGGCCGTA 934260 30 100.0 35 .............................. CCCATCACACTGCCATCCATCCGATGCAGGATTAC 934195 30 100.0 36 .............................. AGACGAACTCAAAGGGATTGAAGGAGGTAGACGATG 934129 30 100.0 36 .............................. AATGAGTACCGGAAACGAAATCCGCGAAGAACTCCA 934063 30 100.0 35 .............................. TAACGTGTTGTATACGTATCGCCATAAAAGATAGG 933998 30 100.0 35 .............................. CTTCACCCATCAACCCAGCAATGCGGACATTGCCA 933933 30 100.0 35 .............................. TCGATCGTGTCGGTGTAGAGCTGGGTGCCAGTGTC 933868 30 100.0 34 .............................. GTCGAGCGAGAGTCGAACGAATCAGTTTCCGAGA 933804 30 100.0 35 .............................. CCGTACCTGGACATGCAGGCCGCCGGCGAGCTGAA 933739 30 100.0 36 .............................. CAGTTCGACCCCGCCGTCGCGGACGATCTCCTCGAC 933673 30 100.0 35 .............................. CGGCAATGATATCCTCACGAATCCAGCCGTCCGGC 933608 30 100.0 34 .............................. GTCCGGTTCGCGCGCGAGGTGTTAGGGCAACGAC 933544 30 100.0 34 .............................. ACATACTTCGCTGCGCCGACAACCATTCCAGCTC 933480 30 100.0 37 .............................. CGATGTTGGCTACGCCGTGTCGGTACTTAGGCGTCGG 933413 30 100.0 35 .............................. CCTGAACAATACGAGTGGTGTATCGACCGCTTCGA 933348 30 100.0 36 .............................. TCGCCGGTCGCCGTCCGAATCGTTCCCTCGCCGCCG 933282 30 100.0 34 .............................. GATTGAACGACTCCAGGCAACCGCGGACGCGGCC 933218 30 100.0 35 .............................. ATGGTCGCCGCCGCCGAGGCCGGCAAAGAAGCCCG 933153 30 100.0 36 .............................. GAGGCCCGGGCGATGGATCCGCAGGACGCCGCCGAT 933087 30 100.0 35 .............................. GTAGTTGTGTCGAAGCAGGGCCTCGACAACTACGT 933022 30 100.0 36 .............................. GCGCCGATCACGGCCAGGACCGGCTCGAGCCCGAGC 932956 30 100.0 35 .............................. CTGATGGTCCGGACCGGAACCTACTCCGCGCCGGT 932891 30 100.0 34 .............................. GGGTGACTGCACCGGCCATTGACGTGGTAGTTGA 932827 30 100.0 34 .............................. CACAGCAAGGTCGAACAACTCTATCCGCCGGACG 932763 30 100.0 37 .............................. CCCGAACAGGCCAGCGAAAACGCACAGATGGCGCTCG 932696 30 100.0 35 .............................. ACACTTGACGCCTTCGAGGGCTTCGACCCGGCGGA 932631 30 100.0 35 .............................. GAGGGGATCGTCCCGACCGACTGGCGGGTGCAGGT 932566 30 100.0 35 .............................. TCGCTTTCGGCGGTCACTGTCCCCCGCTGTTCCTG 932501 30 100.0 35 .............................. GACTACGAACAGGGCGTGATCGTCCTCGACGAGCA 932436 30 100.0 33 .............................. TTCACGTCAGCGGTCATCGTGTCCCGCCCGGTG 932373 30 100.0 33 .............................. GCCTCCCCCAGCGGCGCACGCGCGATCGAGCGC 932310 30 100.0 36 .............................. TTCACGTCAGCGGTCATCGTGTCCCGCCCGGTGAGC 932244 30 100.0 35 .............................. AGTGTACGCAAGCATCGACGATGTCGGCGCGTACG 932179 30 100.0 35 .............................. AGTGTACGCAAGCATCGACGATGTCGGCGCGTACG 932114 30 100.0 36 .............................. AACGTCAGCCACCGCTCGCTGCAGGAGCTCGGTGAG 932048 30 100.0 33 .............................. GCGGTGACTGAGGCGACCGCCTCGGAAAACGTC 931985 30 100.0 35 .............................. GCGAGCCTGTCGGGATGGGAGCCGTACCTGTCCGG 931920 30 100.0 35 .............................. TGTCCGGAGTGTGCCGCTATCGTTGCCCGGCGGTA 931855 30 100.0 35 .............................. AAGGATGAGGAAGGTACACTGCGAGCACCGCGCCA 931790 30 100.0 34 .............................. ACAAGACGACGGGACGAGCAGTTGCAGAGCACGC 931726 30 100.0 36 .............................. GCCGGACGCGGGGGTAACCGTTCGGGAGAGCGGGGT 931660 30 100.0 36 .............................. AGGATGAATTAGAGCGTGTGGAGAGGACTGACCAAG 931594 30 100.0 36 .............................. GACACACAACGGGTCGACAGAGTGGACTGAAAAAGA 931528 30 100.0 36 .............................. GAGGTTGAGCGGAAGGGTGTGGCCTACATCGACGCA 931462 30 100.0 35 .............................. GTCGAACTCGGGGTGGTCGCGTTGCCACGCCGCGA 931397 30 100.0 35 .............................. AAAGACCGGATCATGCCACTCGACCCGTCGTTCGG 931332 30 100.0 35 .............................. TGCCCACAGTAGACGGAGAACGGTGCAATTCCGTT 931267 30 100.0 35 .............................. ACGCTCAGCTACCTCGGGTGATCGCTCGTGAAACG 931202 30 100.0 37 .............................. GCCACTTCGCCGACCTGACCAACAGTATCGCCTAACG 931135 30 100.0 36 .............................. CTCACGAAAAACGCCCTTTCAGGCCTTCCTGACGGC 931069 30 100.0 35 .............................. AACTTGAGCATCGTCAGCGGGTCCGGGTTCCAGGC 931004 30 100.0 36 .............................. GAGTTTCACACGCCCGAAGATCCGCCCGATCTAGTG 930938 30 100.0 35 .............................. GATTTCGGCTTCGAACCTTCGCCTCGAGCCAGCCA 930873 30 100.0 36 .............................. TGTCCGTTATCGGTGTTCTCGCCGTTGCCTTGGAGT 930807 30 100.0 34 .............................. CCGTCCGTTGGCAAGACATATTGGCCTATGTAGC 930743 30 100.0 37 .............................. AACCGCCAACTGTCCGAGTTCGACGGAGGCCAAGATG 930676 30 100.0 35 .............................. TCATCGACGACTTCGATCTGAACGTGTGGTCCGGC 930611 30 100.0 37 .............................. CGCGACAGTTACCCGGACGCATCACCGAAGCAAGACG 930544 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 106 30 100.0 35 GTTCCAGACGAACCCTTGAGGGATTGAAGC # Left flank : GAATCGGAAGGTGAGCTTCAAAACGCTCGTTCAGACTGACGTATACAGTTTGAAAAAACACATCTTGACTGGGGAGCCCTACCATCCGACAGAAAGGTGGTGGTGAGATGTACGTTATCGTCGTGTACGATGTTCCGGCTGAACGAACACATATTTATCGAAAGTTGCTGCGACGACGACTGGAGCATCTTCAACAATCTGTATTCTTCGGAGAACTTACCAACGGGCAAGTCACAGCGTTGAAAAATGAGATCGACACCACAGTCAGAGAAGATGACTCGGTTGTCGTGTTCGAATCTAGCAATCCAGCAGCGTTTGACTTCACTACTTTCGGGGCGAGTGACGAGCCTGGAAGCCGGTTTACTTGAACCGGTTTGTTTTGTTTGTCGTATGAGGGAATTTCCATCGACCCCCTGTGGATTGCAGGTGAATTGAGGGTCGATGGAAACATCTTTGTGAAATCGAGAAGTATAGCCATCTACCCGCCTATATTCCCGCGG # Right flank : GGTCAACGCCACCCAACGAACAGTTGTAGCGAAACAGATTCCAAACGGACTACCTCACAGTTCTCATATAGATATCTGTGTTTCACGGTATTCAAAAAGAGTCTAGTCGATACGTGGTCCCACGCCCGTTCCCCTCCTTGACGACCAGATCGTAGCGCTGGAGGCTCGCGAGGTACTTCCGGCGGGTGCTCGTCGCTTTCGGGTTCTGGGCTTGCTGTTCGTACTGCTCGTGCAGCTCGCTCGAGGCGATCTCGCCGGCGTTCGCGATAATCTCGTAGAGGATGCGCTGGTGGGTGCCCAGCGAGCGCACGCGACGCTCGCGCATGTCGGCCTCGGCCTCGTCGACGATCGTGTCGACGACCTCGGTGGTCAGCCGCTTCCGATCGGACTCTTCGACGTGGCGAGCCGCACGCCGGAGCAGCGCGATCCCATGGCGAGCGTCGCCGGCGGCGAGATCCGCGATGTGTCTGACTGCAGCGTCGTCGACGCGCGAGGCGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACGAACCCTTGAGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1597174-1595968 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064787.1 Halapricum desulfuricans strain HSR12-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1597173 30 100.0 36 .............................. CTCAAGCATCACTTTCCATTGATCGCCTTCATAGAC 1597107 30 100.0 36 .............................. AGCGACATCGACGCCGTCTGGCTCGCCGAACCGCCG 1597041 30 100.0 37 .............................. AGCCCCATGTCGTCCTCGTCGACGTCCTCCGGTACGC 1596974 30 100.0 36 .............................. GGTATTGCGGTTGAGATAGCCGCCGAGGATCGGCTC 1596908 30 100.0 36 .............................. TCATCGCGTTCGTCGGTGGGATGACGGCGATGCCCG 1596842 30 100.0 33 .............................. ACGGACATCGACGTGCCCGAGTTTGTCCCGCTC 1596779 30 100.0 35 .............................. GCGGATCTGCAAGACCTCGTCGGAGTCGTCGTCGG 1596714 30 100.0 33 .............................. GCGAACAGCAACGCGACCGAGCATCTGTGGACC 1596651 30 100.0 36 .............................. CAACGACTCGCTCAAGGACTCAAAGCAATCGGTGCG 1596585 30 100.0 36 .............................. GGATTACGGCGTTGACGGCCAGATTGGGTTAGAGGG 1596519 30 100.0 33 .............................. CTGTGTCGATCAACTTGTCTATATAATCTCCTA 1596456 30 100.0 35 .............................. GCCAGTATGAGGGTCCGCGATCGGCTGGCCTCGGC 1596391 30 100.0 35 .............................. ACCTCTCATCGGCCGACACAGTCGACGTTTCGGTT 1596326 30 96.7 36 ................T............. CTCGGGGTAGCTGCCGCGCTGCGGGACCAAAAAGTG 1596260 30 100.0 33 .............................. CATCATTTCCGCGCCGGGTTGGTCCGGCGAGTC 1596197 30 100.0 36 .............................. GGCGTCCTGCAAGAGGTGACGATCACGCCGACCCGC 1596131 30 100.0 36 .............................. GGCGTCCTGCAAGAGGTGACGATCACGCCGACCCGC 1596065 30 100.0 37 .............................. AATCCCGATTTGGGTTTGCTCCCTGCTGCGACACGCA 1595998 30 83.3 0 ...C...........C.A....T.....C. | C [1595975] ========== ====== ====== ====== ============================== ===================================== ================== 19 30 98.9 35 GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Left flank : AGAGGAGACGATTGAGCATCCGAACCTCAATCGCAAGGTGAGTTATCAGTACCTCCTACGCTTGGAAGCGTATAAAATCAAGAAACACCTCCTCGCGGGCGAGGCGTACGAGCCGTTCGAGCGGTGGTGGTAACGTGGTGTACGTGATCGTCGTCTACGACGTACAGGCAGAGAGGACGTATCGCTTCCTGAATTTCCTCCGGAAGTATCTCACTCATGTTCAGAACTCCGTATTCGAGGGGGAACTGACCGAAGGTGATGTCGAAGAAGTCAAGCACACACTTGAATCGATGCTCGAAGCCGACGAATCAGTGATCCTCTATCGAATGACCTCCGAAAAGTACGTCACTCGGACTGTCTACGGCGAGGATCCCGCCGAAGACGACCAATTTCTGTAATCGGTCATCAACCCCCCCGGGGCTCAGGGGTTATCACAGGTCGACGAAAACACTAAGGACTCAGCCCGTCCAACAGGCACTGTATGGCCTGAACTGGCCATG # Right flank : ACCCCTCTCAAAACACACTACGTGCCCCGAGAGACACATCTGGAACGTCACAGCGATTCCGGTTCGCGCTGTTCGACGACCGGGACCGGCGGATCGCGGTCGCTGTAGTACTTCCGACCGATCAAAACCCCGCTCAGCGACGACAGTACGATCTCGCATGTCGGCCTCGGCGATTGCACCTCGCCCGCGTCGCACCGACTGACAGCTTCTGCCAGCGTCTCGCCGCCGTCCGGCAGCTCAAGCCGCCGATCGCCATCGAAGCGACTCGCCTCCGGGACGAACTGGTCGACGATGGGAACCGGCTCTCGACGACGGACATGCTCATCGCCGCGACCGCCCGATCGACCGGCGACGAACTCGTCGTCGCTGACGCCGATTTCCGGACTGCCCCGCTCGAGGACGTCATGGCCGTCACAAACCGTCGGGAATAACGACCCCGTACCCTTACTGGCCCGATTCGAACACGTCGTCAAAGAGCGACTCGACCCGTCGCTGGACCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //