Array 1 135827-131413 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDD010000007.1 Halomonas zhaodongensis strain NEAU-ST10-25 NODE_7_length_293946_cov_72.163298, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 135826 28 100.0 33 ............................ TAAGCCGTGCGATGAGTGGAGCGGCTATACTGA 135765 28 100.0 33 ............................ TTCACTATGCGCTGGCCGTTTAGTCGTAAAATT 135704 28 100.0 33 ............................ TATCGGCTTACGTGCGTTTTCAGGGCCGGATTG 135643 28 100.0 33 ............................ TCTCGCCAAGCGTCCGACTCGCTGACGAAGAGG 135582 28 100.0 33 ............................ CACCGAGGGGCAAAGCTGATAGCGGGTAAATGC 135521 28 100.0 33 ............................ TGGCAGGCTTCACGCAATGGCGCTATTTCTTCT 135460 28 100.0 33 ............................ CAGGGTTATCCCGCCAACGGTTACATACACCGT 135399 28 100.0 33 ............................ TGATGCGGTTTCCTGATGGCCCAGGTCAGTACG 135338 28 100.0 33 ............................ TAAAGCGTTTGTTAGCACTGATTTAGACACAGG 135277 28 100.0 27 ............................ CACACACACACACACACACACACACAC 135222 28 100.0 33 ............................ TTAGCTATCAGCGTGCTGCTTTTCATATCCACG 135161 28 100.0 33 ............................ CATGCTGACGCTACCCGATAGTTTAGCGGCGTT 135100 28 100.0 33 ............................ TCCATCTTTACTGCAGGAACCAAGATATGGCGC 135039 28 100.0 33 ............................ CATTACGTCGACCCTTTTACGGTGGTCATAGTC 134978 28 100.0 33 ............................ CATTACATGGTGCGCACTCAAGATGTAGACCGT 134917 28 100.0 33 ............................ CATTTGGTCGTTACAGCGTCGCGCTTTACATGT 134856 28 100.0 33 ............................ TTTTGCCGAAAAAGTACCGTAAAGGTACCAAAG 134795 28 100.0 33 ............................ TCCTTTAACTTTAAAACTAAAGAATCTCGTTGA 134734 28 100.0 33 ............................ CCAGCACATACGGCCGACGCTCGTTTTGCATCG 134673 28 100.0 33 ............................ CGGGCTGAGCATCTGGATCGATGGCGAGCGTAA 134612 28 100.0 33 ............................ TTACTAAGCGCGGCCCGCTGTGGCGGTCGTGGT 134551 28 100.0 33 ............................ TATTGGCAGAATATTTAATGACGTATGATATAC 134490 28 100.0 33 ............................ TATGGGGTATTCGCATCATCCCGCATTAGTAGA 134429 28 100.0 33 ............................ TGTATGGGACGTAGCGCAAGCGTCAGCAATGAC 134368 28 100.0 33 ............................ TGTTATTGGCGTCATAGTCATATGCTCAGGTAC 134307 28 100.0 33 ............................ CCAGTGCGCCCTGACGATTATCAGGAAGCAGGC 134246 28 100.0 33 ............................ TACATCGAGATGATGCTGTGCGTTGCGCTCGGG 134185 28 100.0 33 ............................ CCACTTTCTTACGAATTAGCGTGTTTAACGTCT 134124 28 100.0 34 ............................ CCCCATCGGGAGTAACGATCCCCGCGACCGCGAC 134062 28 100.0 33 ............................ TCGTGAATCAGCGGCGTACATGAATCACGTTAT 134001 28 100.0 33 ............................ TGCCATATCAACGAGCTCTTCCGCATCCGCATT 133940 28 100.0 33 ............................ CGCGGCACTCCACCGTTTCGACCACGCCGGTAA 133879 28 100.0 33 ............................ CTCGACGGATTTATGTTCCATAGTTTAACAACC 133818 28 100.0 33 ............................ CAGATGAATGCATTGACTGCATAGCGCCCGCAA 133757 28 100.0 33 ............................ TAGGCTTCCAAAAAGCGTCATCTTTTGTTTCGG 133696 28 100.0 33 ............................ TACCCAGAATTTCAGCTGTTTGAAGGCTGGTTC 133635 28 100.0 33 ............................ TCAACGTTGTTCGCGTTTCGGCGCGTGAATGCA 133574 28 100.0 33 ............................ TAGGGTTGTCTTCGAGCTCAAAGTGACCTCTCG 133513 28 100.0 33 ............................ TGTTTCCGGTTTTGCTGGTGCTCTCGCATCGCT 133452 28 100.0 33 ............................ TAATTCCAAAGCGTGCATTGCGGTGAAAGTTGC 133391 28 100.0 33 ............................ CGCGTCAGCACCGACGGCGTCCTGGCGCGCCAT 133330 28 100.0 33 ............................ CTTTACCTTCGCCGCATTCGGCCGTGAAAATCC 133269 28 100.0 33 ............................ CAACTCCTCTAGACTCATAGCACTCAGTTCTTG 133208 28 100.0 33 ............................ CGCCACTAGCCAAGGGCTGGCCGTGCTGCGTCG 133147 28 100.0 33 ............................ CAGCTTCATCAGCTGGGAAACCGTCGCGGATAA 133086 28 100.0 33 ............................ CATGCTAGCAACTCTTGCTCGCTCGCCTGCTGA 133025 28 100.0 33 ............................ TCACGGGCTGTTTGATTAGCGACAAAGTGTATA 132964 28 100.0 33 ............................ CGCGCATCTCCACCGCATTAGCGGGGGCTGTGA 132903 28 100.0 33 ............................ CCACTCGTTATCCGCGGCGTTACTGCTGAAGGT 132842 28 100.0 33 ............................ TGGGCCGGTGGCTTTGTTGATGGCCTGTAGGGT 132781 28 100.0 33 ............................ TGGCAGGCATGCAAAGCTCTGGCTGGGATGACG 132720 28 100.0 33 ............................ TATGCTCGCTCTCACTCACTGAAATGCGGCGAT 132659 28 100.0 33 ............................ CGACCCGGACTTTTCCGGGGCCGTGATCGAGAT 132598 28 100.0 33 ............................ CATGAGGTTTTCTAGCGGCGGCACTGGGGTGTA 132537 28 100.0 33 ............................ TTCATCCGGTGCGGCATGCCCGCCGCTTCTGCT 132476 28 100.0 33 ............................ CTGCTGGATGATGCAACGCTACTGGATCGCGTA 132415 28 100.0 33 ............................ CAACCAACCCCTCTTCGGAGGGGTTATATCCAT 132354 28 100.0 33 ............................ CAACCAACCCCTCTTCGGAGGGGTTATATCCAT 132293 28 100.0 33 ............................ CAACCAACCCCTCTTCGGAGGGGTTATATCCAT 132232 28 100.0 33 ............................ CTCCAAACCGCTGAGGCACTTAACGTCAATCAA 132171 28 100.0 33 ............................ CTAAATCTGAGACGGTTACAAAAAAAGTAAACG 132110 28 100.0 33 ............................ TCACCAAAGACCTGTCGTGGGATCTACAAGATC 132049 28 100.0 33 ............................ TTATGACTGTCGCCGCTATCGTTGAAGATGAGT 131988 28 100.0 33 ............................ TAGCCCTGGCTCTGTATGAAAACTCGATAGATT 131927 28 100.0 33 ............................ CAGCAAAAACCTCGATGTGCTTATGCACACTGA 131866 28 100.0 33 ............................ TGGATTAGAAGGGCAGCGTAGCCGTGTAGCGCT 131805 28 100.0 33 ............................ TCTTACCTTCATTATGGCGGTCGCGGTATTACG 131744 28 100.0 33 ............................ CACCGGTGCCAAAGGCTTGGAGCTGACGTTTGA 131683 28 100.0 33 ............................ TACTTTGCAGCCTAAAGTATGAGTCTTGCCTCG 131622 28 100.0 33 ............................ TCTGATGTTCGAGCACGCACGTGCGATGGTTGC 131561 28 100.0 33 ............................ TGACAGACCAGGAGGGTAGAGGCCTGTCTGAGT 131500 28 100.0 33 ............................ CACCGAAGGTGGCCACCAACAAGCAGCACACAC 131439 27 92.9 0 .....................-..C... | ========== ====== ====== ====== ============================ ================================== ================== 73 28 99.9 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TTTATAAGGAACATTTATGTATAGATTTAGCGTTCATGCTAACGCGAGACATGGCCGGTCGTTACAACAAGCAAAAGGTATCTGCAGCCTTTCGTGAGCGAGTCATTGAAATGGATCTCCTCGTACGGTTGGCAGATGACATACAAGACATACTGGGGGTGAGCCGTGCTCGTGGTCGTCGCAAATGATTTGCCACCCGCTGTACGTGGACGAATGAAGCTCTGGTTTGTTGAACCACGGGCTAATGTATTTGTGTCGGGAGTCAAAGACTCGGTTGCTAAAACAGTGGTCGACTACCTGTATCAGCATTGCCCGCCTGAATCTGGCGTGGTTATTTTTCGTTCCTTACCTAAGCCTCCGGGATATGAAGTTCGAACGGTTGGGCCCACACGAAAAGCATTAACAGAAATCAGTGGACTGCAGTTAGTTATTGAAACACTGAAAAACCAATAAACCCTATATCTTGTGTTTAACAGGGGGATCTTTAACAATATACTGGT # Right flank : TTTCCTACACACGTTGGCGGTGATGGCTTACATCGCTGCTGCTTTATTTCTGAGACCATAACAACTGTCGCCTTGTTGCACCCGTGGCGGTTTCCGCTTCGCCAGAATTCTGCGATGGCAGTCGCCCCCAGCTAGTTTATGGCTGGGGGCTTTTGTTTATGCGTGGGTGAGCTTTTCTAGTGCGGCGTTGGCGAGAAACGCGGAGCGACTTTTGATGCCGTGAGCGGTGACGTAGTTGTCGATTTGGCGAATGACATGCCCTGGCAGGGTGACATTCACTTTTTCGGTTTTGCCCAGGTAGGGAGTGACATCGATGTCGATAATGCCCCATCCCCAGCCTTCAAACTCGGGGTTTTTCCGGTGTTCTGCGATGCTTCGAGGCATGGGAATGTCCTTGCCTTCATTAGCCAACTCTTCTAGTTGAATGTGTGCAACCTCAACCGCCAATTGATAGGCCTGTTCGGTGGTATCGCCTGCCGTTATCGCCCCAGGAATATCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //