Array 1 501633-495427 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYQF01000003.1 Ginsengibacter hankyongi strain BR5-29 BR5-29-2_scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ================================ ================== 501632 48 100.0 30 ................................................ GGTTCGATTCCGGGAACGATTCTAAAACTT 501554 48 100.0 30 ................................................ ATGTAGGTCAACATTCTGCCTGTAGTATTG 501476 48 100.0 30 ................................................ AATATAGATGCAATAATAAATTCCTGGGCT 501398 48 100.0 30 ................................................ TCCATTACTGTAATTCCAATTTTCCCTGAA 501320 48 100.0 30 ................................................ GGCAACGGCTGCTTCCTGGAGATCTTTATT 501242 48 100.0 30 ................................................ AATGTTGAAGTAGGTGTTATCATCTGGCAG 501164 48 100.0 29 ................................................ AGATGCAATAGCTTGGTCAATATAGAGCA 501087 48 100.0 29 ................................................ CCATTGAAGAAAACATCGCAAGTGCTAAT 501010 48 100.0 30 ................................................ ATATCTACAGGTGGTAAAAATATCGGGTTG 500932 48 100.0 30 ................................................ TGCGAGAACGTGGCGCCGTAACACATTAAA 500854 48 100.0 30 ................................................ TATTACAAGACAAAGACGAAAACGAATTAG 500776 48 100.0 31 ................................................ TAACGGTTCAGAATTGGTAGAAACTTTTGGA 500697 48 100.0 30 ................................................ TTTACAAGATGTAAACGCTTAACCTTTTGG 500619 48 100.0 30 ................................................ GGCAAAACGCCTACTGTTCCTGTGGTAGAT 500541 48 100.0 30 ................................................ AAGTAATAACGGTTTCCCCCCGGGTCTCAA 500463 48 100.0 30 ................................................ GTATTCCTGCTCTTCGCCCGTTCTTACCAT 500385 48 100.0 30 ................................................ GCCTTTGCTTCAGCTTCAGTGTATTTTATT 500307 48 100.0 30 ................................................ GGAAGATATGATACGCTGAAATATAAGTTC 500229 48 100.0 28 ................................................ GGTTCTAATACTTCTGGCATAAATTTTT 500153 48 100.0 29 ................................................ TAATTTACCATTATGAAAAATTGTTTTAA 500076 48 100.0 30 ................................................ AGCAGTGGGGCATTACTAAATGCAGTGCCA 499998 48 100.0 30 ................................................ ATTACCGTTGCAACAGGTGGTACAGGCTAT 499920 48 100.0 30 ................................................ AGTGCAGCAGGAGGTAATTCTGGTATAATT 499842 48 100.0 30 ................................................ GTAGGAGTTCACCCATACATTACTCAAACA 499764 48 100.0 30 ................................................ AACATAACAAATTGACTCCATGTAAAAGTG 499686 48 100.0 31 ................................................ TTGTGCATTAGTTTTATTTGAGTAATCATAA 499607 48 100.0 29 ................................................ GTTGTTTGCTTTGTTAAAAAAAATCCCTG 499530 48 100.0 30 ................................................ TGACTATCATTAAGGCCAATGCCTTCAATA 499452 48 100.0 31 ................................................ GTTGTTAGTGTAAGTATCTACAGAAGGTTGG 499373 48 100.0 30 ................................................ TTGAATCCTTCAACTGCAAATGAATATGAA 499295 48 100.0 29 ................................................ AACACCTCTCTTATTATAGCGTTTATCCC 499218 48 100.0 30 ................................................ TACCAGGAAATAATATTCTTAAGAAACTTT 499140 48 100.0 30 ................................................ CTAAAAACTTTTTGGTAGCAGTTATTCACG 499062 48 100.0 30 ................................................ TAACCGATGTTAACCTGTATGTTTCTACCT 498984 48 100.0 31 ................................................ TAACTCTTTCATTCACTGCAACCACAGGTTC 498905 48 100.0 29 ................................................ ATTGGAGAGTGCGACAACTTCGATTATCA 498828 48 100.0 30 ................................................ CGTGTGCCGCCGTTGCCGAGCAACATTTCT 498750 48 100.0 30 ................................................ AAGTTGCCCGGCAAGGGCAGATTTCCCCAC 498672 48 100.0 30 ................................................ AGCCAAGGGTCTATCATTACGGCTATTATG 498594 48 100.0 30 ................................................ TAATCCATTCAATTCAATGCATATTGAAAT 498516 48 100.0 30 ................................................ TAATCCATTCAATTCAATGCATATTGAAAT 498438 48 100.0 30 ................................................ TAATCCATTCAATTCAATGCATATTGAAAT 498360 48 100.0 30 ................................................ TAATCCATTCAATTCAATGCATATTGAAAT 498282 48 100.0 30 ................................................ TCAAGCCATACCTTTGGGTTAACTGTATCG 498204 48 100.0 30 ................................................ AGCTGTAGTTACTGCTTTCAATAAATTTTT 498126 48 100.0 30 ................................................ AAAGCAAGCTGGACGCCGCCGCGCCGCGAA 498048 48 100.0 31 ................................................ CTGCTTAATGCATGGCCGTTTACGGTTGTAG 497969 48 100.0 29 ................................................ ATCCATTATTTGAGCATTCAAATCGCGGA 497892 48 100.0 30 ................................................ CAAAGTTTGCCTATGCGGAGCCAGCGGCCT 497814 48 100.0 30 ................................................ TAATAAAACAGGGACTACATTTTCCTGAAG 497736 48 100.0 30 ................................................ CCCGGTCAAATTCTTTAAATGGGTTCTCTT 497658 48 100.0 30 ................................................ TCTTGCTCAACCGATAAGAATTGACAGCTT 497580 48 100.0 30 ................................................ TTAATGATAGAAACTATGTTAAGAAGGAAT 497502 48 100.0 31 ................................................ GGGTAACTACCGGGTGATGATCGGGCTTGGT 497423 48 100.0 30 ................................................ TGGCTATCGTTTATGCCGATGCCTGAAATG 497345 48 100.0 31 ................................................ ACTTATACTCGCCACATATACAAGACCATTA 497266 48 100.0 30 ................................................ AGGAGCACAAATGTTAGCTGTGTATTTTGG 497188 48 100.0 30 ................................................ AAGTAACATTGGCTCTTTAAATTGTCGTAA 497110 48 100.0 29 ................................................ AATTTAAAGCGGATCTCGAAAAACTTTAA 497033 48 100.0 30 ................................................ GATCTCGATTTCGCTACAACCGACTTCTGG 496955 48 100.0 30 ................................................ AGCACCATTGCAGGTAATACGCTGGTAATT 496877 48 100.0 30 ................................................ TAAGATTTATTTTATAATTAGACTGCATGC 496799 48 100.0 30 ................................................ ATTATGTCGTCTGGTAGTCCTATGTATTGA 496721 48 100.0 30 ................................................ ACACGTTGGGCAATTTCTTTTTGCAAATCG 496643 48 100.0 30 ................................................ AGTCTCACTGGTAGTAATGAAACCTTGTAT 496565 48 100.0 30 ................................................ TCCGGTAACAGGTTGTCTATGACGGGTGCC 496487 48 100.0 29 ................................................ CGTGAACGTGTAGTGAAATATCAAATCCC 496410 48 100.0 31 ................................................ TGGCAGGCCTGGGAAACCGTAAGGCTATAGA 496331 48 100.0 30 ................................................ TTGCAGGCGCGGATTACAATGGTGTGGTCT 496253 48 100.0 32 ................................................ TTATTGGCAAGCAATTGTTGAAGATGCAATAA 496173 48 100.0 29 ................................................ CATTAAGCGAGTATTGTCTATTTTCATGA 496096 48 100.0 30 ................................................ TTACCGGGTTGATAGTATTCCGGGAACTTC 496018 48 100.0 29 ................................................ TGCAATATGGTTGTAATTAACGGGGTGAA 495941 48 100.0 30 ................................................ TAATCTGTGTGTGTGCCCCGTACTGCCGGA 495863 48 100.0 30 ................................................ TTGAGGCCATGAGCCCTAACGATAAAGAGT 495785 48 100.0 30 ................................................ TTTGTATGCTCATTCTTTTCCTCCAACGTT 495707 48 100.0 30 ................................................ AAAGGCAACACAGTAGTTGCAAAAACACCA 495629 48 100.0 30 ................................................ TATATTACCGTTATGGCATTTCTGAACCAA 495551 48 100.0 29 ................................................ TATATTTTGCAGGTCCGGAAGATTTTTAT 495474 48 95.8 0 ....................C..A........................ | ========== ====== ====== ====== ================================================ ================================ ================== 80 48 99.9 30 GATGTGAAAGAACTAAGTTAATATCATTCGTTGAAAGCAAATCACAAC # Left flank : CACCGTGAGTGAGTAGCTAAAATAAATTTCGGCAAATTTTCGTTCAACACTAATAGCAATAATTATAACCATGTATGAGCGCCTGAACGCATACCGTATTATGTGGATATTAGTACATTTTGATTTACCGACCGAAACAAAAAAAGACCGGAAGAACTATGCGCAGTTCAGGAAGAAGATTATGGCCGATGGTTTCAATATGTTCCAGTTCAGCATGTATATAAGGCATTGCAGCAGTAAAGAAAATACAGAAGTGCATATTAAAAGAGTAAAATCTATATTGCCACCCAAGGGCCATGTAGGCATCTTAACCATTACAGATAAACAATTCGGCATGATGGAAATCTTCCGTGGGCATGAACCAACACAACCGCCCGAAACCACCCAGCAACTGGAACTTTTTTAAACGAAAACAGGAATAAAAAACTGAAACATATCCATTTTTTTATTCCTGCAAAAGTAGTTCAAACACTGTATTAACAAGCCTTTCAGCCAAATGC # Right flank : TGTGTAATGCGGCAATATAATGGTAAGAAATTGATTAATATTATTTTAATAAATTTCCCGGTATAAAATACGATGCCGCATACTGAAGCTCTTCTTTCTCCTCTTTAAATTTCTCAAATGCCTGCATATACCAGTTTGAGTCTGCAGGGTCATCTGTAAAATCTTCATAAACCATCACCTGGTAAAACGCTCCATTTTTCCAGGGCTCAATACCCAATATGCCAGGGCCCTGTTCTTTTACCCGATTAAGCACTTTTTCAAAATCATCTTCAGAGAAATATTTAATTCCTGGTGCATCAAAGCCATCGTTGAGGTTTTGCAATCCATAAAAAATACACGTATCAAGAAACGCTTCTTCCCGTTTAATTATATTTTCCATTTGCTTGTTTTAAAAGTATGAAGAAATAGTATGGTACATAAAAAGCCTGTTGGTTAGGGGTCTATACTAATATGGCAGCCGTGACCCCCGAGGGCATATATCTTGGGTTCCTGTTGATAGT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTGAAAGAACTAAGTTAATATCATTCGTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //