Array 1 46137-45315 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZGD01000014.1 Escherichia coli isolate F1_402D, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46136 29 100.0 32 ............................. ACAATCCCACGCCGATAATCTCTATACAGCAA 46075 29 100.0 32 ............................. GGCACGGAATTGTTATGCTGTTCCCCTGACCG 46014 29 100.0 32 ............................. TCATGAATATGGGGAAAACGAACAATCTGTTT 45953 29 100.0 32 ............................. ATGACCATTGGTGAACGCATCCGCTTTCGCCG 45892 29 100.0 32 ............................. CCGACGTGGGGATTTACTGCCACGCATAAAAA 45831 29 100.0 32 ............................. TACAGTTTCCATAAATTCACCTCGTTTATATA 45770 29 100.0 32 ............................. ATCGGACGATGGCGATCGCAATCGCGCGGGAA 45709 29 100.0 32 ............................. AGGACGAAACGACCGGAAAACTGGCGACGGGC 45648 29 100.0 32 ............................. CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT 45587 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 45526 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 45465 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 45404 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 45343 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TTATTTTTTATTTTGATTTTTTTTTTTTTTTGATTTCCTTTCTTTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGATTGACACGGACACCAACGAGATCTACACGCCTGCCTGATATCGTCGGCAGCGTCAGATGTGTATAAGAGACAGATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAG # Right flank : GGATATAGAGCGGGTACTCGAGCGAAGCGGGGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20169-19713 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZGD01000070.1 Escherichia coli isolate F1_402D, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20168 29 100.0 32 ............................. CGGCCCATAATATTAATATAATCCACATGAGG 20107 29 100.0 32 ............................. CATATCAAGAATTTATGGACTCGGGTGGCAAA 20046 29 100.0 32 ............................. GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT 19985 29 96.6 32 ............................T GTGTTTGCGGCATTAACGCTCACCAGCATTTC 19924 29 100.0 32 ............................. AGCAGATACACGGCTTTGTATTCCGTGCGCCC 19863 29 100.0 32 ............................. AATAGCAATAGTCCATAGATTTGCGAAAACAG 19802 29 100.0 32 ............................. GAGCCTGACGAGACTACTGAGGCCGTTCTGTC 19741 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAG # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //