Array 1 4031-4302 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKQM01000042.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold42_size18181, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4031 29 100.0 32 ............................. TGCGGTTCGTTTTGTACGATTAGCGTTCGCGC 4092 29 96.6 32 ............................C ATGTGATAGTGTGGTCTTGCTGTCTGCTCTCC 4153 29 96.6 33 .....................T....... ATGCATATGGCTGACTGCAAGCGTCAGGTGGCC 4215 29 93.1 31 ....C.......................C ACAACACAGGGGTAGAATGCCATGGTGTCGC 4275 28 79.3 0 GC...................C.T.-..A | ========== ====== ====== ====== ============================= ================================= ================== 5 29 93.1 32 CTTTTCCCCGCATACGCGGGGGTGATCCT # Left flank : AAGACACCCAAAACCCCGCAGCGCGGGGAACCGTGGCCGCACATTGCACAACACAGTACCAGAAGCAGTGGCTGTTGGAGCGCGCCGCAAAGCGCGGCTTTGCCCTGCGGGAGGAGGGATTTACCGTGACCCGGGTGCAGTGGCAGCATTTTGCCAAGCACGGCACCCGGCCGGTGACCCTGTTGGCAGTGACCTATGAGGGCGTTTTGCAGGTGACCGATGCAGAGCAGTTCCGGGCACTGCTGTGTCAGGGCATGGGGCGCGGCAAGGCCTATGGCCTTGGGCTGATGACCGTTATGCGCGCAGGAAACTGAGAGGAACGAGATGCCGGGCATGATCCTGCCGGACCTGCAGGCGCTGCCGCAGCATTTTCAGCTGGCAGAAAAAGTGGGGCATCGCGCCCTGCCGGACTGCCATTTGATACAACAGGTTTATTGCAAACTGAAGGAAACAGCGGTACAATAGCAACGGGAGGCACGGTGCTACGGGATCTTTTTAGT # Right flank : AAAAGACCCCTCGCAAGGTTTTGCGTGAGCGCCTGAAAAAGCACCCCTAAAGCAAACGAACCGCCCCGGTTTCCGTGATGGAAGCCGGGGCGGTTTTGTATGCAGGAGGCGGGAGCAAGGGCAGTTCCTCCGACCTTGCGCTTTCTGGCGTTTCAGGGAAAAATGCGCAAACAAAAAGCAGGCAGTGTCGTGGAAAGGAGGAGGAAAGCGACACTGCCTGCTGTATAGGAACCCCTGAACATTGCGGCTTGGTCAGGAGGGATTTGGTAGTCTGTCCGCCGTTCTGGCTATTGCCTCGCATAGAAACGGGAGACAGTTTTTTATGGGCCTGCGGTGCGCCGCTGCTGCGGCCGCACCCGCAGGGAAATGTGCCTGCATGGGCTTTTGCGGGGAGAACCTTTCGGAGGTTATGGGGGATGTCCGTTCCGTTCTCCCTGAGTGCACCCTTATTATGCCAGACAATCGTGGCAATTCTTTGTGGTAATTTTGAACAGTTTGCA # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCATACGCGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 12076-12463 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKQM01000041.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold41_size21157, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 12076 27 100.0 33 ........................... TGATTCATGATAGATTACCTCTCTTCTTTCTGA 12136 27 100.0 34 ........................... TTACGGAATGGATGTGGTTTCACATTTCATGGCG 12197 27 96.3 33 ............C.............. CTTGTCGTGTCGTTGCCTTGTGAAATATGGTCT 12257 27 88.9 33 ...................A...T.A. CCGCTCAGGTCGGCACCGCTCAGGTTGGAACTG 12317 27 88.9 33 A...C....................A. ATTTCGATGCCGTCACCAGTGTAAATCAATCGC 12377 27 100.0 33 ........................... TAGTATTCGTAAATGCCATGAAAATTGATTGCA 12437 27 85.2 0 .....................A..CCA | ========== ====== ====== ====== =========================== ================================== ================== 7 27 94.2 33 GTACAATCCCCGTAAGGGGGCGAAAGC # Left flank : CGTCCACCAGATCCCGGCACAGGCCGATCAGCGTTTCCGGGCGCTGATCCTCGGGCAGGTGGAGCTGGTGCACCTGATCTTCTGCAATGCCCAGCTGTGCCAGCTCTTCCAGCAGGCGCTGATAGTTGCGGGCGGTATCGGCATTTTCCTGCCGGATGGCCAGCAGCTGCACCGTGTCCCCGGGTTCAAGGGTATCCCGCATTACCTGCACGATGGGAAAGCAGGTGGCCGTGGGCGCACCTGCCCGCTCCCGCTGGTACAGCATGGGGTCCAGCTTTCCCTGCAAAGGTACGGTGGTGATATAAGTCTTTAGCACAGGGCAACACTCCTTTTTATAAGATTCATTATCTGCATCATACCATGAAACCGCCCCGCGCACAAGGCAGGCTGAATGAATTTATGACCGTTCCTTTCAGCGCAAAAGCACATCATTGCAATAAAGTGAATATTTTCCAGCCATCCGGCTCTTCAGTTTTGCGGTGTTTTGTGATATATTTAGG # Right flank : AAGGCAAGGAAAGTAATTTCAAGTTTCTTACTTAACTATCCACATTCCATGGGCTTTTTCTCTTTGCAATGTCAAGGAGGAATGCCCTATGCTCATCAACTTTACCAATCATCCTTCTGCCCTGTGGAGCGCCGAGCAAAAGGCTGCGGCGCAGGTCTACGGCAAGGTGATAGACCTTGCCTTCCCTGCCATCGACCCCGCCACCAACGAGGCCGTGCTGGACTCCCTTGCCGCGGTATATGCCGACCACATCCTGCACCTTAACCCGGACGCCGTGCTCTGTCAGGGCGAGTGCACCTTTGTGTACCGGGTAGTCCAGCGTCTGGAAGCCGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGCCAGGAGACCACCTACCCGGACGGCAGCACCCTGAAGCGCAGCATCTTCGCCTTTGCCGGCTTCCGCCGCTATGGCACGCCCTGAAAAGGGATTTCAATTGTTCCACCACCGTGGTATAATGGAGCCG # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACAATCCCCGTAAGGGGGCGAAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //