Array 1 50-592 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQQ010000022.1 Enterobacter cloacae complex sp. P2B 1701025599_S63_R1_(paired)_contig_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================ ================== 50 28 100.0 32 ............................ GCGTTCGTATGCGCTGGTCGCCTGATAATCAT 110 28 100.0 33 ............................ TGAACGTGACGCGCACGCGTGGGGGGGACATCT 171 28 100.0 32 ............................ AGGTTCCGTTGACGTAGTTGTACGTAAGTGCT 231 28 100.0 64 ............................ NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 323 28 60.7 33 NNNNNNNNNNN................. GAAAAAAACAACCCAACCATTAACAACATTGAG 384 28 96.4 33 .....T...................... GACGATCTGGAAGAAGCGGCAGCCCTCGCTAAT 445 28 96.4 32 ................A........... TTCAATCGAATTAACCGACAGTACCGGGAGTA 505 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [529] 565 28 71.4 0 ......C.T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================================================ ================== 9 28 90.5 36 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TACAGGCAGCTTAGAAATGGCGAACCTTGCATCAGAGAAGTCTTTTTATG # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAACA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 675-50 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQQ010000013.1 Enterobacter cloacae complex sp. P2B 1701025599_S63_R1_(paired)_contig_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================= ================== 674 28 100.0 32 ............................ ACTGGCACCTGCCCCAGCATCCCAAAGATAGG 614 28 100.0 32 ............................ TGGCGCACAGAGGGCGAGGCGCACGGCTACCG 554 28 100.0 32 ............................ TGCGCGAAACCAGACCAGCGCACGCGGGACGG 494 28 100.0 32 ............................ GTCCCGGCGGGGTTAGCCGGGATGGTCGCAGC 434 28 100.0 32 ............................ AGGGCGATTTCAAACACGCGCTTATTCATCAG 374 28 100.0 89 ............................ ATGACGCTGGCAACCGCCTTGCCGTTGATCATGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 257 28 64.3 32 NNNNNNNNNN.................. GGGGCAGGTTCCAGTAGGCAAGCAGTACGATT 197 28 100.0 32 ............................ GACGAGCGAAACCGCCGATTTTACGGCGTACA 137 28 96.4 32 .....A...................... CGCCAGACGTGGGGCGAGCAGGTAAGCGCAAT 77 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ========================================================================================= ================== 10 28 96.1 38 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTTATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : ATTGTCAGTCTGATGAAAATAAAGGGCCAATGCGTTCACTGCCGTACAGG # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 860-292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQQ010000023.1 Enterobacter cloacae complex sp. P2B 1701025599_S63_R1_(paired)_contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 859 28 100.0 33 ............................ GCAGCCGGTCACGGTGACCATCCCGACGCAGAG 798 28 100.0 31 ............................ GTCCGGGCATTATTTACGATATGCGTGACCA 739 28 100.0 32 ............................ CATCCTGGTCGCCATCGTCGGGGACAACATCG 679 28 100.0 32 ............................ AACGCCGTTGCAGGATAACGGCTCAACGGTTC 619 28 100.0 32 ............................ AAATTTCGTTAAGCTCCGGGTAGTTGAGCATT 559 28 100.0 32 ............................ GATGCGATTTGCTGCGCTGAGGTATCGCAGAA 499 28 100.0 32 ............................ GATATCCAAACAGCCCAGGTCTGAATAAACTG 439 28 100.0 32 ............................ TAGAGCAGCGTTATTTCACGCTCTCGTTTTCG 379 28 100.0 32 ............................ ATTGGCTTATTGAATCCGTATGTCTTGCGCAT 319 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAATACGTGCACTGCCGTACAGGCAGCTTAGAAATTACCAGGACAAAATGCACAAAAACATACTACGTGCACTGCCGTACAGGCAGCTTAGAAAAATGCACCACTCGTACGACCACGACGAAGGGTGTGCACTGCCGTACAGGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 11492-10416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQQ010000023.1 Enterobacter cloacae complex sp. P2B 1701025599_S63_R1_(paired)_contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =============================================================== ================== 11491 28 96.4 32 ..G......................... TGTATAACCATTGCCCCGTGATGTCGTTATAT 11431 28 96.4 32 ..G......................... TAAGAAGGAGTATTTCCCGCTATACAGCGAAG 11371 28 100.0 32 ............................ GGTGAATATGTCCCGCCACTGGCCGTGGAAGT 11311 28 100.0 24 ............................ TCTTTTTGCTCCTTTTTGTCATCC Deletion [11260] 11259 28 89.3 32 ...G....TT.................. AGCTGTTCGCCGGTCATTGGTTTATTGGCTGT A [11253] 11198 28 100.0 33 ............................ GGTTGCAGCATAGTGCTTAAGTGCATCAGTTTT 11137 28 57.1 63 ................NNNNNNNNNNNN NNNNNNNNNNNNNGTACAGGCAGCTTAGAAATCATGGGGGTGGCCTGACAATGCTGAATTTTT 11046 28 100.0 32 ............................ TTGTGAAGCACTATGGCGGTAACTACCAAGGA 10986 28 96.4 33 ....................T....... AAATCGAAGCGAGTGGGAAAAGAACAGTCACAA 10925 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 10865 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 10805 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 10744 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 10684 28 96.4 32 ..........T................. TGCATTGCTTCTGCGTGGATTTGATCGAGGGT 10624 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 10564 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 10504 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 10443 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ =============================================================== ================== 18 28 95.8 34 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAGCACATCTATGCTGCGGTATTTGCTCCTATT # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATAGCGTTACTGTCCCATAGACAGTACAAGTAAACCCATTCCTCACAAATATTCATCTCGTCTATTTAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATGTTGTATTTTTGTTGAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATATCCGCATTCATTACCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGGAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATAC # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //