Array 1 68847-70829 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSFO010000007.1 Klebsiella pneumoniae strain GCKp28 NODE_7_length_261991_cov_86.662179, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 68847 29 100.0 32 ............................. CAGCTGGCCGTTTTGATATGGACGACGCGCAA 68908 29 100.0 32 ............................. CAGAAATTTACCGTTGCGCCGGCGGTTCAGCA 68969 29 100.0 32 ............................. CGCAGCTGGATTCCGAGCGCGTGGTGTTCGGC 69030 29 100.0 33 ............................. AGGTATCAGCAGAAATGCTGACCCGGATCCTGC 69092 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 69153 29 100.0 32 ............................. CTAAACCCTTTCCCCTGGACGGAGGCGCTCAC 69214 29 100.0 32 ............................. ATTAACGTTTTAATCCCGATATAGTCACTGGA 69275 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 69336 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 69397 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 69458 29 100.0 32 ............................. GGGACAAAAAATATCGGCGCCAACGCGGCACG 69519 29 100.0 32 ............................. CACTGATCGCGGCGTATAGCGATACGGGCCCG 69580 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 69641 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 69702 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 69763 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 69824 29 100.0 32 ............................. GCGCTCGACCGCCAGACAATCGGCTTTAACGG 69885 29 96.6 32 .............T............... TTTGCGGAAAAAGTGGCCGCGTATTCCGGATT 69946 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 70007 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 70068 29 96.6 33 ............................T GGCGGCGCGACAAAAATTATACCCAGCAACGAA 70130 29 96.6 32 ............................A GTCGATCCCCACGGTTGAGAAATTATTGACCC 70191 29 100.0 32 ............................. CGGAGGGTTGCCAACCGATGATTTCAGCAAGG 70252 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 70313 29 100.0 32 ............................. AAATAATCGTGCTGCTCTGACGTACCGGGCAC 70374 29 100.0 32 ............................. CGCTTCAGGGAGAAGAAACTTCCTTCGGCGCC 70435 29 100.0 32 ............................. ATAAGGCCTGGCTTTAACTCAACGGAGCACGG 70496 29 96.6 32 ...........................T. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 70557 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 70618 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 70679 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 70740 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 70801 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 33 29 98.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGTCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGACACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCAGGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //