Array 1 3235808-3238457 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024838.1 Klebsiella pneumoniae strain CRKP-1215 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3235808 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 3235869 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 3235930 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 3235991 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 3236053 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 3236114 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 3236175 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 3236236 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 3236297 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 3236358 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 3236419 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 3236480 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 3236541 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 3236602 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 3236663 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 3236724 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 3236785 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 3236846 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 3236907 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 3236968 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 3237029 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 3237090 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 3237151 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 3237212 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 3237273 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3237334 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3237395 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3237456 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 3237517 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3237578 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3237639 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3237700 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3237761 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3237822 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3237883 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3237944 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3238005 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3238066 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3238127 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3238188 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3238249 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3238310 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3238371 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3238429 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //