Array 1 42194-40211 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNTY01000016.1 Klebsiella grimontii strain 705420-17 705420-17_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 42193 29 100.0 32 ............................. AGGGTGTACAGGCTTTCAAAGATTATCAGGAT 42132 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 42071 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 42010 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 41949 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 41888 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 41827 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 41766 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 41705 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 41644 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 41583 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 41522 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 41461 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 41400 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 41339 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 41278 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 41217 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 41156 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 41094 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 41033 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 40972 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 40911 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 40850 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 40789 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 40728 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 40667 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 40606 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 40545 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 40484 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 40423 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 40362 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 40301 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 40239 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 33 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 60958-59891 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNTY01000004.1 Klebsiella grimontii strain 705420-17 705420-17_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 60957 29 100.0 32 ............................. ATTAGGGGTAAAATGGGATGCCACCATCTCAT 60896 29 100.0 32 ............................. CTACCGCCCTGGCCATTACTGAGCATAGTAAC 60835 29 100.0 32 ............................. GCACGGCGCGAAGCGCGATCAGCTGACCAGCT 60774 29 100.0 32 ............................. CTGTGACGTTACCTCCTCGGTGTCGTAGTCCG 60713 29 100.0 32 ............................. TGTGCGAGGGCCGGTGCGATTTGACCGGATTC 60652 29 100.0 32 ............................. AAACATGGCTGACCGCTGCTGAGTGTGTCGCG 60591 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 60530 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 60469 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 60408 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 60347 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 60286 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 60225 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 60163 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 60102 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 60041 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 59980 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 59919 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 18 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //