Array 1 113134-110076 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML219769.1 Halorussus ruber strain YC25 Scaffold9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 113133 30 100.0 36 .............................. TGGGAAACGACGACCGGCACGGGTGAGAATACCGGG 113067 30 100.0 39 .............................. CTCGTCGGGGCGGTCGCTCTCGTTGGCGGCGTTGGTCTC 112998 30 100.0 35 .............................. ACACTACCGCGACCGACAAGACGGTCGTGAATCGG 112933 30 100.0 36 .............................. TCGACCTCGACCATCCGCACGTCGTCGCTGGCCGTT 112867 30 100.0 35 .............................. GGTTTGTTCTCGATGATGTACTCCGCGCCGTACTG 112802 30 100.0 36 .............................. GGTGAATTACTCGGCCGAGCATCTCACCGTGCGCTA 112736 30 100.0 37 .............................. TACGGGTGGCGCGCGCTCGGGTTCGCGTCGGCGGCCG 112669 30 100.0 36 .............................. GGTGTAGGTCGCGGAAAGGTCAACAGTACCCGACGT 112603 30 100.0 36 .............................. GAGGACAGCGCCCGACCGGCCAGCCCTGCGACGCCG 112537 30 100.0 35 .............................. CCCTGCTCCACGAAATTCACGGTTATGCTACTCGC 112472 30 100.0 35 .............................. ACCGAGGACGCCGAGAACACCAGCGGGACGACGAG 112407 30 100.0 34 .............................. GGCCTCGTGTGGGTCTTCCGGGTCATCGTGCGGC 112343 30 100.0 38 .............................. CACGGCATCCCCCGCGACGAGATCCGCCAGCAGTACCG 112275 30 100.0 36 .............................. CCCGATGGGTCCGAGTCCAACCGGTCGCGCACGTCT 112209 30 100.0 37 .............................. CGAGGACACTTTTGCCCGCGCCGGTTTCGCCCCCGAT 112142 30 100.0 38 .............................. GTTGAATCCGCCCCGCTCAGCAATCCACCCGTTCACGG 112074 30 100.0 35 .............................. TCCCATCTCGGGGGACAAGTCCCGACGAACCACAA 112009 30 100.0 35 .............................. AAACGGTAATCTCGGTGGGGGGTTCGGGTGAATTT 111944 30 100.0 33 .............................. TCGATAGGTGTCAGTCCGAGTATGCGACAGCAG 111881 30 100.0 36 .............................. AGCGCGTACGACGAGGACTTCGCGGTGCTGTTGGCG 111815 30 100.0 36 .............................. GGGAGACACAATCCCGTTCCGGACCCTCGGGACGGT 111749 30 100.0 37 .............................. GTGCTAGCCGGTGACTAGACGACAAGAGGGATACAGC 111682 30 100.0 36 .............................. CAAGACCGGACCGACCGAGAACACGGAGCGTGGTCC 111616 30 100.0 36 .............................. CTTCGGCCAGACGTTCGCAACCTCGATCCCCTGCCA 111550 30 100.0 37 .............................. CGCGGGACCGTCGAGAAGGCCGGGACCACCCCCGCCG 111483 30 100.0 36 .............................. TTACGCGGTTGGGTCGAATTCATTCGTGCTTCACCT 111417 30 100.0 38 .............................. GGTATGTCGCGTCCCATAGTCGTGGCCACGGACCGAAT 111349 30 100.0 36 .............................. AGGCCGCACTCGCGCCGTACGCGAAGCCCGGCCGTC 111283 30 100.0 34 .............................. GGCCCGGAATCGAGCGTTCATACGACGTAGTCCT 111219 30 100.0 36 .............................. TCCCCCGTAGTTGCCCTGTGCGCCGGTCACGCCGGT 111153 30 100.0 37 .............................. CGGGTCGCATACCCCCGTCGAGGAGGTCGCGTCCCCT 111086 30 100.0 36 .............................. AGCACCTCCTTGTAGAGGCCCCGCGAGTCGGTCTCG 111020 30 100.0 33 .............................. CCGTGGAGTTGCCCGATAGCGTCCACGGAGACG 110957 30 100.0 33 .............................. AGGTCGTCGGGCCACTCCCGGTCGGTCTCGCGG 110894 30 100.0 33 .............................. CCGTGGAGTTGCCCGATAGCGTCCACGGAGACG 110831 30 100.0 35 .............................. GCAATCTGCAACCCGAGTTCGATGTTCTCGCGCGA 110766 30 100.0 38 .............................. GCCCTCGACCGGGTCGGTCGGCGCGCCAGCCTGCACGT 110698 30 100.0 36 .............................. GAGGCTCGCCGCGCCGCCGGTCATGTGGTAGACGTG 110632 30 100.0 35 .............................. ACGTTGGCGCTCCGGCAGTTGGCGAAGAAATCGAG 110567 30 100.0 35 .............................. ACTTGTCCGCCGTCCGGCGGCTGACCGGATTTGGT 110502 30 100.0 37 .............................. GGCCGGGGCGACAAGCCGGAGATTGGCGACGCAGACG 110435 30 100.0 38 .............................. TCATGTCGCAGTCTACAGACTGGGGGCTAAAGATAACC 110367 30 100.0 34 .............................. GTGAGTTGCTCCAGCCAGAAGTCTTGGTAGGCGT 110303 30 100.0 36 .............................. CTCGACCGGCCGCTGTTCCGGCCCGACGACGCATAC 110237 30 100.0 36 .............................. TCGGGTGAAGGCTCCGCGCCCGCCGAGTACGGCCAC 110171 30 100.0 36 .............................. CTCGTTTGGGTGGCGAAGCGCGGGCGCGTGGTGCAA 110105 30 96.7 0 .......G...................... | ========== ====== ====== ====== ============================== ======================================= ================== 47 30 99.9 36 GTTTCAGCAGAACCCTTGTGGGTTTGAAGC # Left flank : GACCTCCTCTCGGAGGTCCGCGGGCATCTCCGCCGACTCGAACAGTCGCCGGAGTTTGGCTCCTCGGTCCTGTAGCGCCTCCACGTCGTCGAGGTCGAGGTCGCCCAGTAGCTCGTCTATCGACTCGCCGAGGCCCGCCGCCGAGACGTAGCGGTCGTAGGCCGCCGCGGTCGTGGTGAACCCCGGCAGAGTCGGCACGTCGGTACTGGCGAGTTCGCCGAGATTCGCGCTCTTTCCACCCACCCGGTCGATGTCGTCCGACCGTAGCTCCTCGAGTGACAGTACGAATTGGTCGTCCCCCATGTGAACCCCGTTGTTCTTCTTCGGGAAGCGCCTTAAACGGGGGTCCTCGGTCGGAGAGGACCTCGGCTGGGTCTCGGTTTGGTTCGCGGAGTCAGATTTTCGTCGACCCCCTGGGGTTCAGCGGGGTATTGGCGGTCGACGAAAACACTTGTATGGGTTCGGCCACGAGAGGCGGATAGGCCGGGAAATCCGGCATG # Right flank : CTTCTGGGTCGCGTACTCGGGCGGGTTCTCCCAGTTTCAGCAGAACTCTCCGAGGAGTCACCCGCGGTGGAACATATCCTGACGCATCCGCAAAAGACCACCACGCAAATGATTCCATTTGTTTCCAGAGCATACAGACAATCTACGAACATAATAACATTGCTAAGAGACCACAGACTGTGGTCTAGCCGAGGAGAACACCGGAACCACGATTGGCAGTCCTCCGACAGTCCTCCTCTGGCCCGAACCCGTCGAACAGGTGAAACCGGGAAACCGACGCCCCGAGCGCGGGTCGGCGGGTTTTAACGAATTTAAGATTACTCTAGCGAATGCGCTATGGTTTTACTATATGCTATCCGCTATGGAACATATTTACGGGTCCAGACCGTCCATTCGTCTATGGCCGCGAGCGACTCACCGCCGATTGGACTCTCCCACCCGACCGTCGAGAAGCCGAAGGACTCCTCGTCGGGACGCGGACGGCGCGAGCGCGTCACCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGCAGAACCCTTGTGGGTTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGTTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //