Array 1 55375-54414 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEVQ02000021.1 Flavobacterium jejuense strain EC11 R6_NDMS06846.contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 55374 36 100.0 30 .................................... CTAATTCTGCAAAGCTTTCGTTGTTTAGTG 55308 36 100.0 30 .................................... CAACCGAACTTTTTACGGATGTAGTAAATG 55242 36 100.0 30 .................................... TTTGTATATCTGTTTTTATCAAAGTATGCA 55176 36 100.0 30 .................................... CAGTTTGGATTTCTATAGTTGGAAAGGCTG 55110 36 100.0 30 .................................... TTAGTCATTTACCTAGTTACGCTTATAAAG 55044 36 100.0 30 .................................... CACAACCTCCAGAACCACTATTTTGTGCAA 54978 36 100.0 30 .................................... TGAGTTTTTCTTGTTTTTCTGAAACTTTAC 54912 36 100.0 30 .................................... GTCCTACTTCAGAATTAACTAATGCTATAG 54846 36 97.2 30 .........A.......................... TGTCTTAGACTAAAAGAAACTAAGTCTTGA 54780 36 100.0 31 .................................... AAGGCGAGCAAATCTCTTTTCCTTCTGTCCA 54713 36 100.0 30 .................................... GCTTACCTTTTGATATTACGTTATGGATGA 54647 36 100.0 30 .................................... TGTAAAAGCGTCCCTATAAAAGAATGAAGT 54581 36 100.0 30 .................................... TTGGAAGTAAATCTATATCAAATGGAATAC 54515 36 100.0 30 .................................... GGAGAAGCTCGGCGACAAATTTTGAATGTG 54449 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.8 30 GTTGTGAAAGCCTTTATTTTGAAAGGTATATACAAC # Left flank : AACACCCTGAAAAGTTTGAAAAAGATGGTAATCCTAATTTTAAAAAATACATTATTGAAGGTATGTTAAACAAAATTACACCCGTAAATGAAATAGAAGAACTTGAGATTTTAAAAAGTAAAGAAGACGTATTTAAAATAGACTTTAATGAAATAGTAAAACTCAATAATGAAAGTATAAAAAAAGGATATTTACTAATTATGATTAGAAATAAATTTGCACATAATCAATTAATTGATAAAAACTTATTTACTTTTTCATTACAACTTTATTCAAAAAATGAAAACGAAAATTTCTCAGAGTATTTAGATAAAGTATGCCAAAAAATTATTCAAGAATTCATAGAAAAACTAAAATAACAATAATAACCGCTCCTTGAAATACTGTACTACTAGAAATTAAAAAATGACTATTTTAACACAAAAACCGTTCAAAAAATTCATTTTTTTTATTAAAAATATACTAGAATCCCTTTTAATATCTAGGTTTCTCGACTATAC # Right flank : TAAACCAGCAGCATATTTTACAGTTGACTTGTTGTGAAAGCCTTTATTTTATTCACTGTTCTTCTATTGCTTTTTATAGGAGTTCATGAATCTTCGATTTGAAAGGTATATATAACGATTATTTCCCTTTGACAAAGTTCTCAGCACAAACTAAAAACTTTGTCAAAGGTTTTTTAAAGAACTATATCATTTAAACCCAAATCCCCTAGCCCAGAGTATAATAAAACGCTTTTTGTGAAAGAAGGCTATTTTTTGTTTGGGTAAAAAAGCGACCAAAGGAAGCTCTTTTTAGTCTTTACAAAAAAAGCCTTCTTTGCAAAAACGTGTAATGGAAAGCTGGAAATGGCTCCTAAGAGAAGTTATCTGTTTTCTGTTGTCAGTACTCTACTTTCAATAGTTAGTCTATTCATACCCATTTTCTTTCTTCTTGCTTCTTTCCTCTTGCTTCTTTCCTCTTGCTTCTTTCCTCTTGCTTCTTACTTCTTGACACTTCCCTCATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAAGCCTTTATTTTGAAAGGTATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 74011-70852 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEVQ02000007.1 Flavobacterium jejuense strain EC11 R6_NDMS06846.contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 74010 46 100.0 30 .............................................. CTCCAGAACCAATGCTATTTGCGTATTCTG 73934 46 100.0 30 .............................................. TGGATCAATTCAAGCTCTTACAAAGCCGTT 73858 46 100.0 30 .............................................. TTAAGTTCCAAAGTATTTGTGTAATACTTT 73782 46 100.0 30 .............................................. AAGTGCGGGAATAGGAAAAGGGTATTTAGA 73706 46 100.0 30 .............................................. AGAAAAAAAATATTTCATGAATTCTGATAT 73630 46 100.0 29 .............................................. TATCCATCCTCTAGGGTCGTTTAAATCTT 73555 46 100.0 30 .............................................. GTTTAGCGTTTTCATTGCACATATACGCTT 73479 46 100.0 30 .............................................. CACCGGTCAATCCATTCATGATTCTTTCTT 73403 46 100.0 30 .............................................. TGTCCATCATGTTCAGACATTTTAGATATA 73327 46 100.0 30 .............................................. TAATGATTTGATAGAATGCTATGGTTTTGA 73251 46 100.0 30 .............................................. CGAAACGAATTGAATTAGCTTTACTGATAT 73175 46 100.0 30 .............................................. AAAATAAAAAAAAAGGGCTTGCCCGTTAAA 73099 46 100.0 30 .............................................. CTTGAGAGTTTAAAGGAGTTTCAAAATTCA 73023 46 100.0 30 .............................................. TACATCTATAAGTTTATTAAATGCGCTGTC 72947 46 100.0 30 .............................................. TTATATGGTAAAGTATGTGACGAAAACAGA 72871 46 100.0 30 .............................................. TTTGTTTAACAATACGACAAATGAACATAA 72795 46 100.0 30 .............................................. CCCAAAAATTTCTATAGTACCATTCATAAT 72719 46 100.0 30 .............................................. GAATATGATTGTTGGGGCCTTATTTCATCA 72643 46 100.0 30 .............................................. AAGCTTGATGATAAAATGTTTGAGTATACT 72567 46 100.0 30 .............................................. AACAAAGAAATTGCAGTTAATCAGGAAATG 72491 46 100.0 29 .............................................. TACAGCTTCTTTAGATGTGCCAAAATCTT 72416 46 100.0 30 .............................................. TACAGGAATTGAAATCGTAAATTCCGATTA 72340 46 100.0 30 .............................................. TATATTATCAAATATCATGCATTTTTTTGT 72264 46 100.0 30 .............................................. GTTGTTCAATAAGAAGATGTGAGCCAAACA 72188 46 100.0 30 .............................................. AAGTTTCACTTCCTATTGTTGTAGTGGTAT 72112 46 100.0 30 .............................................. TGGTGGTTTAGAAATTTGGTAATAACAACA 72036 46 100.0 30 .............................................. AAGTTTCACTTCCTATCGTTGTGGTGGTAT 71960 46 100.0 29 .............................................. GCACAAACTTAAGGACAAAAGCTTATATT 71885 46 100.0 30 .............................................. CTAATGTATTAGCGCCGATTAAGGAAGCTA 71809 46 100.0 30 .............................................. AAAGAATATCAAAAGATGATTTGTGTAATA 71733 46 100.0 30 .............................................. TATTGATATTGCTATAAAAAAACAAAACTA 71657 46 100.0 30 .............................................. AAAAGCAAAAACAAACTTAACAGAAGAACA 71581 46 100.0 30 .............................................. CCGTCAATCCATTCTGTGTTCATCCAGTTA 71505 46 100.0 30 .............................................. TTAATTGATAAAACAATTGAAGGGCACGAA 71429 46 100.0 30 .............................................. GGGGAGGGGCTGTTTGTGCGCCCCCCACCC 71353 46 100.0 30 .............................................. AATAAAGATGGAATCTTCGTGACATTAACA 71277 46 100.0 30 .............................................. CGGTAAGAAGATTCTTAGAGCGGTGGCGTA 71201 46 100.0 30 .............................................. TGAGGGGCATGAAAGGAACAACGCAATAAT 71125 46 100.0 30 .............................................. TGGGTAAACGAACAGACAATAAACTACATG 71049 46 100.0 30 .............................................. CAGAAGTTTTGCGCGTCTCTTCGTGTATAT 70973 46 100.0 30 .............................................. CGGACTAAAAGCAATAGGAAGTCATATCCT 70897 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 42 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTAATGATTCTCAAC # Left flank : ATTTAGGATCACTATCTTGCGGAACATTAAATCCATAGGCATAGCATAATAACCTTCCATTTTCTGATGGTGCAAAGTGAATTTGAAAACCTTTTTCATGTCTTTCATTATCTAATCTTGTATTACCACTTTTTACAAATATTGCAGAATTACAATTAATATCAGATTTACTATCTACAATACCAACTACATATAAGTTACTTTTAAAAAATTCAATATTGCTTGTCATTGAATTAACTATGTTTACCAAAGTATTTTGTATTATCATAAAAGAATCTGCCCATTTTGCTCTTCTCAAATTGTTTTGCTCAAATGTTGTATCAAAATCTTTAGCTACTGAAATAATTTTGTTTAAATGTTCTTCTGTTGTCATTATTTACTTGTTTAAATTGAAACATTAAATTAGTAATAATTTAATTATGATTTATAAATAAAACCAGATTAATTTTTAAATGTTTCAAAATATGAAATTATATTTCAATTTTCACTACTTTTTTTCA # Right flank : ATATCAAGCCCTAAAAATCTGATATGTTGTGAGTTATGGTATTGGCTAGAAAATAAAAAACAGCACTTTAAGTCATTGGTTTCAAGTAGCATAGTACATTTTTTAAATACTAGCCCACTAAAAAAGTTCTAATTGCTGAGAAGGTTTTTCGGTTTCTACAGGTTTTTTACCATAAAATAATTCCATCATCCCAAATTGTTTGTCGGTTATTTGCATTACTCCTATTTTGCCGTGTTCGGGTAAGCTGTTTTTAATTCTTTTGGAATGTACTTCTGCATTCTCTCTACTCGCACAAAAACGCATATAAATAGAAAATTGAAACATCGTAAAACCATCGTCTAGCAATTTCTTTCGAAAGCCAGCAGCTATCTTGCGTTCCTTTCGGGTTTCGGTTGGTAAATCAAAAAAGACTAATATCCACAAACTTCTATATTGGTTTAAACGTGTATAATGGTCATCATACATAGTTATTATTTATAATTTCACTTCTGTTTCTTATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTAATGATTCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //