Array 1 628959-628668 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG315685.1 Halopiger djelfimassiliensis strain IIH2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 628958 30 100.0 37 .............................. GGCTTTCGCTCAGTGTCGATACGCTCTTTCGAAACCG 628891 30 100.0 36 .............................. CACGGGATGACCAGCATCCCGAAGCCACTCAAAGCA 628825 30 100.0 35 .............................. TCCGGGAGCGAGATCGATCTCGAGGTCTCCATCGG 628760 30 100.0 33 .............................. ACCGGGTCGCCGTTCGACGTGGTGGACGCGCTG 628697 30 86.7 0 ..................GAA........T | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 97.3 36 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : CGTTGGCCGCACTGCTCGAGTCGAACGCGGACGTTACCGTCCGGTTCGAGTACGAGGACTACCGCGTCGTGATCGGTCCCGACGAAGTGACGGTGACCGACGCGGATCGGTGACCGGTCGTCGATTCGAATCGACGGACGATTTCCCCTTTTTCTCGAGCCGTTGTTGCTGGGCTGTCGGAAGATTCCGAGAGGAACGCGTCCCGATGACTCCGGTTGAAACGGGTTCGTTGTGACGTCGGGGAGACGTCTTCGAGGCCGGCGAGAGCGCGCAAGAGGCAATAGAGACGGGTAGCGAGGGAGACAGCGGAGGAACCGACGTGTCCCACTCCGTCGACGAAGCTCCATCCGACGTTTGAGAGAGACGAAACGGGAGTCGGAACCGATTACGATGACTCCGATTTCCATCGACCCCCCGGGTTCTGAGGGCTACTCCCGGTCGACGGAAACCAATTTATGAGAGTACCCTGCATGGGTGCTCACAGGCGGAGTTTCCGCATG # Right flank : CGGGAGCGACTCTCCCTCGAGCTTGGGGCAGAGTTTTATCAGTACAGTGAACGCATGAAACGAGTGAAAGCCCGAGCGATGACAGACGATAACCGAAAAGCGATCCGTGATGCCCGTCGGAATGACCAGAAATACACGGAGCAAATCACGCCAGCCGGCGCGTCGTCGATACCCCCGTAGGGACATCGCGTTTTATCGAAACCGACCAACCGGTCAATATCCTAACGTTCTTTAGGGTTGCTTGCGTAACGCAGAAACGCGCACGAAAGTGCGCAGAGCCGGAGTGTACAGCACCAACCACACACTCCGGCTCACACATCCGCCCCCGCGAAGCGGGAGCAATCCACCATTGGCGTTGGCGAAATAAAGACCTGCCGACGTCCCGCCGATACAGTCGTAGCTGCCGCTGGGTCGCTCGCTGGATTGCCTTTCGCTGCGTCGGGGCCTGCAAACCGAGTAACATATGGTCTCGAGAATTACACTCCACTGCGACTGTGGTA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 281332-281074 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG315687.1 Halopiger djelfimassiliensis strain IIH2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 281331 36 97.2 38 .......A............................ CGATGTCCGAATCTTCGAGATATTCGCCTGCTCCGCCA 281257 36 100.0 39 .................................... TCGTCGTGTTCACAAGATCCTCCTCGAGCGTAACGTCGG 281182 36 100.0 37 .................................... TACTTCAGATCCTCGATATCGGCCGCTGCCGCTGGGG 281109 36 97.2 0 .............................G...... | ========== ====== ====== ====== ==================================== ======================================= ================== 4 36 98.6 38 TCGCAGCGGGGAGAAAACCCACAACGGGATTGAAAC # Left flank : AAGCATTCGTCGCAAACGATATCCTGTTTCAATCCCGTTGTGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGGGATACCGCTGAACGTATG # Right flank : GATTGCAGTAGGACCACCCTCGAGACGCTACCAACAACTATAGAGAGTGACCGCGAGGGTCACGAACGCGACGCCGGCGATACCGTATCGAACGGCCGAAAGGGAGTCGGTCAGGTAGACCAGCAGACCCGTCCCGCCGCCGACGAGCAGGATATCGATCCCGCCGCGGATGAGGGAGGTGCCGTCAGCCTCGAGCAGGTAGCAGACACCCATATCGAAGATGTGCCCGTACGCGAACAGGACGAGCCCCCAGCTAACGCCGAGAACCGTTGCAAGCAGCGGGTCGGAAACGAGGGCGGACATCGACGCTGTCGTCGGCTACGAATCGCGGGATTATTTTTCTGTCGGTTCTGTAAGGTGACGGATTACCCCCGATGGGATTCCGGGTGTCGCTCGAGCGCGCTCGAGGACGCCGCCGAAACGCAGCGCGGGCTCGAGGACGTCGCCGGGCGGCGATTCAGGAGTCGAGAACGCTCTGGATGTAAAGATGCGCGTAGACG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCAGCGGGGAGAAAACCCACAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA //