Array 1 194437-192883 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOLW01000047.1 Haloarcula amylolytica JCM 13557 contig_47, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 194436 30 100.0 36 .............................. GTCGGCGACGCCGATGAGCTGTGGGCCAACAGCCCA 194370 30 100.0 36 .............................. ACTTGGTTGTTTAGTCGCCACTGGAACCACCCGCCG 194304 30 100.0 37 .............................. CTCTGGTGGTCGCTATGAGCGAACTGCCGCTCCCCGT 194237 30 100.0 38 .............................. GGACCGAGGATATGTTCTACAACCAGGCCGTGATTGGA 194169 30 100.0 37 .............................. CCCGAGTCGGAGCTACCGGAGACGCTGGAGGTCTCAT 194102 30 100.0 38 .............................. TCGAAACCGAGGAGGAGTATTGGCGAGAAATCGAATCA 194034 30 100.0 36 .............................. AAGAGTCAGGACTTGTGGTCGCTCGTTTTCGTCGCC 193968 30 100.0 36 .............................. CCAATGCTCCGCTCGCTCAAAATCCTCAAGTCGATC 193902 30 100.0 36 .............................. GGCCCAGTCCTTACTCGTCTGCAGCGGACTCGGCGG 193836 30 100.0 35 .............................. TGACAAACAAAGACGACTACACAGACTATAATCAA 193771 30 100.0 36 .............................. GTCCAACGCACTCATGCCTTTCCGCTATGCAATGCG 193705 30 100.0 37 .............................. GTCTAACCAGTCCTCTGACCGGAGCCGGTCAATCTGA 193638 30 100.0 35 .............................. TGCGGAGAGCGCAGTGCCGAAGGTACTTGAATCTC 193573 30 100.0 37 .............................. ATCCATATGCAGCTCGCCTGGAGCGGGCTCGAAGGCG 193506 30 100.0 34 .............................. CCGGGTTCGTCGCGCTGACCGGCCCAACGGAGCT 193442 30 100.0 35 .............................. ACGAGCAGAGGATGGGGCGTCAGGGTCTGCCGGAA 193377 30 100.0 37 .............................. TTCCATCAGCCGCACCCCGGCGTGTTCGATTTCGACG 193310 30 100.0 38 .............................. GAGGTCAAGCCCTCGGACGCGGATGGTCGGCGCTTGTT 193242 30 100.0 36 .............................. TTTGCCCGTGAGCGGCGGCGTTGGGGGCAGTATCCC 193176 30 96.7 35 ...........G.................. TGCTACATCCCGGTGATAGTCAGCATCTCGGTCTG 193111 30 100.0 36 .............................. ACGGAGATTAGTGTTTGTGGCCCGCGAGTATGCAGT 193045 30 100.0 34 .............................. CTTCTCTGGGGGTAACACAGATGAGTGACGACGA 192981 30 100.0 38 .............................. ATCGCGACGGATCCCCGATGACGCGGTGACTGCCACGA 192913 30 93.3 0 ............T.T............... | T [192896] ========== ====== ====== ====== ============================== ====================================== ================== 24 30 99.6 36 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : GTGCTTCACCGCGTGCGCGTCGTCGACGATACGACGCGTTATGCCTGCCCGCCGGCACGCTCGGCACGAAGCGTGGAACCCTGTACAAAGGCCACGTATCGGCCGGGATAGCGGTCGCGCACCACACCGACCCCCGGGGAGAACACCAGCATTGAGAGCTGGGGCTGCACGGATAGTACGACACGAACAGCGGTTGGCCCTCCCGAGGATACGGGAACTTGTGGCCGGAAATCACATACCGCGAGGCCGCCTTGCGCGGACGGACGGAACCCCCGAGACGCACGAGCGGGTACCCCGCCGTATACAGAGGGTGGCTCTCCGGCCGCCCGTGAAAACGGAAAAAGAGACATCACACTCATTACGCATACTGTCGAATTGCAGCGACCTCGCATCACGCCTATTTCATCGACCCCCCGGGGGTTCAGGGGGTATTGCCGGTCGACGAAAGTACTGCTATGGAAGTGCCTGAGAGAGTGGCTGTACTGCCCAAACCCGACATG # Right flank : TTGCACCACCCTGCGAGTGTTCCCCGATACCGTCTAAGTTTACTCCGGAAACGGTGGTGTGCTTGCCACAGCAGTCAGTGCTAAACAGAAATTGATAACTGATTTGTCGACATCTGCACTGTAGCCGTGCTCTAGCGGTTGGAGCCAACAGAAAGTTATTCACATCTGGATGTTCTATGTCAAATGTAACGATGGCTCCATACATCCAGAAGGAGGTGGCGCATCTAAGAGACGATGCTACCTCTGGAAGTACTGTGACGTTGGTTCTCGGCGTCGCAGATGGAGCTATGGCTGACGTGAAAGAACAAGTTCACGAGGCGGGGGCTACTTCCATTGAAGAACTCCCGTTCAACAGCCTTCAAGCCACACTCCCGGAGACAAGCGTTGATCGAGTGTGTGACATTCCGGGCATCGAGAGCGTAGAACTCGATAGTGGTATGGAAGTTCTCGCGGGAAACTGAATTATCCTGCACGGTTGCAGTCTGTAAGTCAGCTTAGAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //