Array 1 755580-757197 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054515.1 Flavobacterium columnare strain F9R61 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 755580 36 97.2 30 ......A............................. ATTTTAAAAAGACAGATTAAATCGGCTGGG T,TATAA [755581,755589] 755652 36 100.0 30 .................................... TGACTAAAAAAGCCATTGCAAGCGCTACAG 755718 36 100.0 29 .................................... CGATTTGGTTACACGAAGGTATTTTCGAG 755783 36 100.0 29 .................................... TTTTAAATTTGGCGGTTGACCATAGATCG 755848 36 100.0 29 .................................... ATTGTAAGGTATTTCAAGTGGACACCGCA 755913 36 100.0 30 .................................... ATTATATTTGTGTTACATGGTGTAGTTAAA 755979 36 100.0 30 .................................... TTCAGAAGGAATTTAGAAGCTTCTGTTCCT 756045 36 100.0 30 .................................... TATAAAGCAAAACTAATTGATTGATAAACT 756111 36 100.0 30 .................................... GAAAGCTATGCTGCCATATAAACAGGATGG 756177 36 100.0 30 .................................... TTTGAAATAATTTTTAATTTTATAACATTA 756243 36 100.0 30 .................................... TCTACAAATACCTGAATTAACTCTAAACTG 756309 36 100.0 30 .................................... AAAATAAGAAGAGATAGTAACAGAAACAAA 756375 36 100.0 30 .................................... GCATTTCAAGATAGTAGAGAATTTAATCAG 756441 36 100.0 30 .................................... AACTTGCAAACAATACCAGACTATCAAAAA 756507 36 100.0 29 .................................... CTTATTTTTCAAGTCCGTCGGGGTCGATG 756572 36 100.0 30 .................................... GATGCTGAAGAAAAACACAAAAAAGAACAA 756638 36 100.0 30 .................................... TTATAACCTTTTTACTATTTCATTTAGCTT 756704 36 100.0 30 .................................... AGAATTTCGGTTGGATACTCAAAGCAATTG 756770 36 100.0 29 .................................... GGTTATAAAATTGATGAAGAAATAGGCTA 756835 36 100.0 30 .................................... CGACCGCAAACATACGATAGTTACTTTATA 756901 36 100.0 29 .................................... GTTATTCAAGATAATTGCAACATAGGGTA 756966 36 100.0 29 .................................... TACTCATTCTCACTAAAAGAAATAGCTTA 757031 36 100.0 30 .................................... ATGTTCTATCGGCGTAAAATAAGTTAGCAG 757097 36 100.0 29 .................................... TTAATTAAATCACAAAAAATGACAAGAGA 757162 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AAATGCTTGCCGAATTTAAAAAACGATTAAATGTATAATTATGATTTAAGCGAACAAGCTAAAATAGATTTGTTGCGTATTTATGAATATGGAATTGGTCAGTTTGGTCTAGACCAAGCTGATAAATATTTTGACATGATGCACGATTGTTTTAATAAAATTGCTAAAAATCCATATTTATTCCCTTTGGAATCAAATATTAAGTCAAATTATTACAAATGTGTTTGCGGAATTGACACCATCTATTATAAAGTTGTTACAAATGGAGTTATCATTACAACAATAGTTGGAAGGCAGGATTTTGAAATTCAAAATTTAGTTCATTGACATACACTATCAAATCGCAAATAACCAAACCTCATACTGATTGGTTTGATTAAAGATTAGAAACCGAGGGACGAGGTTCAACGAAGTCAAAACACGATATTATTTGGTTAAAAATTACGATTGTAATTTCAGTTGTGGTTTACAAACACCAAGTCAATATTTGTTATAGGTGT # Right flank : TAGCTAACAGCTTAGTTCTTAAATATCAAAGCATTAAGCCGAAATATCGTTAAAAAAAATGCTTCTTTTTTGGCACGTTATACCAAGATTGAAGCATTTTTTTATTTCTAAAACAGTTCCAGTTGGGTGGGTTGTGGTGCTTTAGGGGTTTCTACTTTACCCCAAAAGTTTTGTATGTTCCCAAATTGCTTGTCTGTAATTCGTAACATACTTACTTTTCCTGAAGGAGGCAGGAGTTTGTGTACACGTTTTTCATGTACATCGGCACTTTCGCTACTGGCACAATGCCGTATATATACCGAGTATTGCATCATACTAAAACCATCTTTCAAAAGTTGGTTCCGAAATCCAGAAGCATTTTTTCGGTCTTTCTTAGTCTCAGTAGGCAAATCAAAAAACACAAACAACCACATAATTCGATACCCGTTTAAATCCATAATTTTGGGTATTTTATCTTTTTACGATCGCCCGAAAAACACTGTTGTAAGGAACTTGCCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1284454-1285538 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054515.1 Flavobacterium columnare strain F9R61 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1284454 36 100.0 30 .................................... TATTCTAATGGATCAATTAAAAAAGCAAGA 1284520 36 100.0 30 .................................... TCGAGAGGTGTTAATGAAACGAACATAGTT 1284586 36 100.0 29 .................................... AATTACTGCTAAATGATACAATGTGTTTG 1284651 36 100.0 30 .................................... GGTAAATAATTTATCTCTAGATTATAGTAT 1284717 36 100.0 30 .................................... GCTATGCTACTTATACAGATGCACAACATC 1284783 36 100.0 30 .................................... TGGTTTTCCGTAATGATATAAATAGAATTT 1284849 36 100.0 29 .................................... CGGTTTGTCTGCATTTGAAACTCCAGCAC 1284914 36 100.0 29 .................................... TCGCGGGAAAAGTTGAAAAAGGATTAAAC 1284979 36 100.0 29 .................................... GTTTTAACCAAACATTTGCCAGGGCATAA 1285044 36 100.0 30 .................................... AGTGCGGAAAGCCCGGCTTTAGAACGCCCA 1285110 36 100.0 30 .................................... GGAGACATCCATCCTCTATCTAAACGTAAA 1285176 36 100.0 30 .................................... AATGAAGAAGTTTATTTAGAAAACCAAAGA 1285242 36 100.0 29 .................................... CAATCTCAAAGTATAATTGATAAATAGGC 1285307 36 100.0 29 .................................... TTCTAGCTTTGGCCACCTCATCTTTTGAA 1285372 36 100.0 29 .................................... TTGTCGAACTTTTCTTTTTTATAATGCAA 1285437 36 100.0 30 .................................... CATATTCTTCTTCAAAGTGATGTTTGTAAT 1285503 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Left flank : GAGTACGCAAATACATCCAGCCGATTTTGAAAGAGAGGGCAATCCAAATTTTAAAAAATATTTAGCCCATTCTATTTTAGAAAACGAAGATGATCTTGATAAACTGCCTGAAAAAGCAGAAGCAATGAGGGAACTGGATGAAACAATTACTAATCCAATCATTAAAAAAGCGATTGTGTTAATTATCATTCGCAACAAAATGGCGCACAATCAATATCCACCTAAATTTATTTACGATTTAGCGAATCGTTTTGTCCCAAAAAAAGAAGAAGAATACTTTGCGACCTATTTCAACCGAGTTTTTGAAACCATAACAAAAGAATTATGGGAAAACAAAGAGAAAAAAGATAAAACACAGGTCTAAATACAATTGCTCTTTGACATTTTAAATTAGGATTAAAAAAATGACTACATTTGCAGTGATTAAAACAAAAAAAGTTCATTTTTTATAAAGAAAAATTGTAGTAATCCCTTACTATGAGAGGCTTACCAGCGTTTAG # Right flank : CACCCTTAGAATCTTCACCGTACCAATACCTGTTAGCCCTTATTTTGAAGGAGGGACGAGCGTTAAAAAATAGTCCAATGGACTATTTTAGCGAAGTAGCCAGGAGGTGCGTGGGCGTTTAAAACCGAATTCAATTTTTTTGAAGGAGGGACGAGCGTTAAGGAAGCTGTCCAAAAAGTACTAATTCAACATCCAGTTTGTCACTCCTACGTAAGGAGGAGTCTCATAATCAATAGTATGTAATTTCTTCCTTTGGTCAAAATCACAAGATTGCGAACTTTTTGGACAGTCTCTAGCAAAATAGCGAGCAGGCGTTTGAAACCAAATTCAATTATTTAAAAAATAGATAAACCATAATTCTTATTCATAGAAATACCTCTTTTTTTAAAATAACAAAAACAAACCTATAACACAATCAAGTAAATATGATCTGTATACTACCTCCTAAACTTCCTTATAATTTAACCTCAACACCTAAGATATTTTTGTAAATTTGAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //