Array 1 1593570-1595058 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN907858.1 Helicobacter typhlonius strain MIT 97-6810 isolate 1 chromosome I, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1593570 36 100.0 31 .................................... GTGATTTGGTCCCATTTTTGGTGCAAGACAA 1593637 36 100.0 30 .................................... TTAGCGACAGCTGTCCCATCCTTATCTATG 1593703 36 100.0 30 .................................... GCAAGTATCTCAAGAATATGTATGGTTTTT 1593769 36 100.0 30 .................................... CTTGTTAAATTTCTTTCTCGATTTATGTGT 1593835 36 100.0 30 .................................... TCACGGCAATACGCAATGTTCCTAAATACG 1593901 36 100.0 30 .................................... TTGAACAAATACATCATATACTGATGTTCA 1593967 36 100.0 30 .................................... TTATCCCTGTGTCAGCTGAATGTTTTCGTG 1594033 36 100.0 29 .................................... GTTACTTATAGAGCCTATGATGAGTTTCA 1594098 36 100.0 30 .................................... CTCTGGAGCAAATTATGTTACGCAGTGGAA 1594164 36 100.0 30 .................................... GTTTGTGTTGCTCGTTATAAAAGAAAGGCT 1594230 36 100.0 30 .................................... TTGCCAGTAGAATCAGTGTCATCAGTAGGG 1594296 36 100.0 30 .................................... GTTCGTCCTCGCTTTGCATATTCGCAAGGT 1594362 36 100.0 31 .................................... GGTTTGCAGAAAAAAGATTTTCAAAAGGTAA 1594429 36 100.0 31 .................................... CTCATTGATATGCAGGGTTTAATCAAATCTG 1594496 36 100.0 30 .................................... GTGTCAATGCCACGACTTTTATCGACAAAA 1594562 36 100.0 30 .................................... TCCAGACAAAAGATGGTTTTATCGGAATGC 1594628 36 100.0 31 .................................... TTTCAGCTCCAGAGCCTCAACAGGAAGTGAA 1594695 36 100.0 30 .................................... TCTCCTCCCGATATGCTTACCGCAATTTAT 1594761 36 100.0 29 .................................... CTGCTTCACAATCTTGCTCACTCACTTCA 1594826 36 100.0 29 .................................... ATCCCGAATGTTGAAACAAAAAAGGTTGA 1594891 36 100.0 30 .................................... TCTCTTTGATACGCTCTACCTGTGTTCGGG 1594957 36 100.0 30 .................................... TCTCTTTGATACGCTCTACCTGTGTTCGGG 1595023 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 100.0 30 ATTTTACCATAAAAGAATTTAATAAGCGGCTAAAAC # Left flank : GTAAGAGTCTTATCAAAGATGGATTTATGATGTTGCAATATAGCGTATATATGAGAATCTGCAAAGGTGTAGCAAGTGCCAATAATTATTTAGATAAGGTGAGTTTGATTGTGCCTCCCAAAGGGCATATTAGGGCACTAATTCTTACCGAAAAGCAATTTGATAATATGCGATTATTGCTTGGCAAAAGAAGTGAGAATGAAAAAGCAAACGCACCAAGACAGCTTACGCTTTTTTAGTCTATTGTCAAGTTATAAGGACAAAGTTTCTAAAGACTTAATCGCTAAAATGTTTGAAAATACTTATTGGTAAAAAGATTTAAAGTAGATTCGGTTTTAAGGGATTGTAACCCTACGGAGACCGAAAACTCCTTATTTTAGCCGCTTATTAAATTCTATGTGGGGATTATATCTTAGATTTTCTTAAAAATCACTCATCTAAGATATTTTAAGCCTTTAAAGTCTTTCAAATACCGCAAAATACGATAATTGAGAAAGTAT # Right flank : CTAATACTTTGATATGTTGAGCATTAACAAGATTGCCATATCATTATTATGATTTCATACATTTGATACCAAAATAAAGGAGGAGCAATGAAAGCAAAAGTTATGAGTTTAGCACTGATGTTAGCCTTATCTAGCACGCTCTTTGCTACACCGCCGGTCCCTACAAAGCCACAGCCACATATCAAGGGCGTTTTACCAGAGGTTTTTAACAATGCGAGTTTTGATAAAAAAAGAGAGGCTTTAAAAGCAGATTTCAAGGAAAGGGAAGCCATTGATAAGAAAAGAGAGGAATTAAGAGGCAAAATCAAAGCACTAGAGCTAGAGAAAAAAATCCTAGAAATCAACTTGCAAGAGGCAAAGGCAACAAGAGATGATACTAAAATTAACGCGACTTTAGCTCAAATCGTGCAACAAGAAGCAAAGATTTCACAAGAAAAGGCTAAAGAAAAGCAAATTATCGCCGAAATGGAACAAAGCGCAATTAGTAAGATTAACAAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCATAAAAGAATTTAATAAGCGGCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //