Array 1 442254-438899 **** Predicted by CRISPRDetect 2.4 *** >NC_012785.1 Kosmotoga olearia TBF 19.5.1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================= ================== 442253 30 100.0 34 .............................. CCCGTGAAGGGCGCTTACTTACTACAAAACTTCC 442189 30 100.0 37 .............................. ACTTAGCTGTAGGTGAAGACTTTGGCAAAAGAGTTTT 442122 30 100.0 36 .............................. GTACGATGTAGGCGGAGAACAGCTCATGTTCCCGGG 442056 30 100.0 38 .............................. GATAATAATTCTATAACTTTTTCTTCTTCTATTTCTTT 441988 30 100.0 36 .............................. GTTTCTATGGTATGCTCGTAAAACTTAAATTCTTTT 441922 30 100.0 35 .............................. GCACGAATTTTTTCTTAATTTCCCTTTTGGTTCCG 441857 30 100.0 35 .............................. TTTGTTGGCTATGACGCATTTAGCACATAGTGAAG 441792 30 100.0 41 .............................. TAGGAATTAACCAGGCATGGCCTAAGGGAGTGTTTGGTTCT 441721 30 100.0 36 .............................. GGACTTCGACGCAGTAAATTTGCATCCAGTTGAAGT 441655 30 100.0 37 .............................. AGTATTTCCTCTTTGGTATCAGCTGGCAATTCCGGTA 441588 30 100.0 37 .............................. TATCTTTTGTAATGCTTACCTTCATGCCTTCCACCTC 441521 30 100.0 36 .............................. GAGTGTCGGGAATTCGAGAGTGATTGAAAATTTATC 441455 30 100.0 35 .............................. TTGATAGTAAAGATGTCTATTCCTTTTTTATACAA 441390 30 100.0 35 .............................. AGATACCAGGCGATCAGGTCGCCGTCGTCATCTTG 441325 30 100.0 37 .............................. TTTTTTGTGTTCTTTGATTCATTCCAGGAAATTTCAA 441258 30 100.0 39 .............................. TTCCAGGAAATTTCAAAGCAAAAGCCTTTAATTTCACTG 441189 30 100.0 33 .............................. ATAACCTTGTTCCATGCTTCTTCAGCTGTCTCA 441126 30 100.0 39 .............................. TTACTACGCTACCTTCAAGTAGCAAGTCAGATTGTTCCA 441057 30 100.0 38 .............................. TTTTTGTTGTCAAAGTTTTTCGCATGCATGAATGCTAC 440989 30 100.0 37 .............................. CTTATGCTAGGCGAAAGCTATTAAAACCTTCACCGCC 440922 30 100.0 37 .............................. ATCAGGGTAACCATAATCCACATTTTCCTCCAGCACA 440855 30 100.0 38 .............................. AGAAACAATCTGGCGTCAACATTCCCTTTCTTTATTTC 440787 30 100.0 39 .............................. TTTTGTGCTTCCAACAACTTATTTAGTTTCGATATTCTT 440718 30 100.0 38 .............................. TTTGTATGCAAAATGATATAGTCATGTATACCAATATA 440650 30 100.0 40 .............................. GTGTCTATGAAAAGCTGATTCTTTTCACAATATTTTCGGT 440580 30 100.0 35 .............................. TTGTTTTCTCCATCCAAGAAACTTAGCCATGCGGT 440515 30 100.0 35 .............................. TTGTTTTCTCCATCCAAGAAACTTAGCCATGCGGT 440450 30 100.0 37 .............................. CCGACTTTTTCGGTTGTTACTTTTCCTTTGAACGTTA 440383 30 100.0 35 .............................. TTTAATTCTTTTCGGGCTAATTTAAGTAGTTCTCT 440318 30 100.0 36 .............................. CATAAAAAAATGGCACGCATATGCGTGCCAAAACAA 440252 30 100.0 35 .............................. TAAAAAATGGTGAGTGCAATGCCTTCGAGTATAGC 440187 30 100.0 41 .............................. TAAGAGTAATGTACCAGGCGCTTAACTCTTCGTTATCACAG 440116 30 100.0 38 .............................. TTTAAGGTTATTGATGACTCGTGCAAATTCATCAGAAG 440048 30 96.7 38 T............................. TTTTCCAAAAACCGGAATTAACATCAACACCTTTTATT 439980 30 100.0 41 .............................. TAAGAGTAATGTACCAGGCGCTTAACTCTTCGTTATCACAG 439909 30 100.0 38 .............................. TTTAAGGTTATTGATGACTCGTGCAAATTCATCAGAAG 439841 30 96.7 38 T............................. TTTTCCAAAAACCGGAATTAACATCAACACCTTTTATT 439773 30 100.0 39 .............................. ATCGCTTTTGACAGTTTCCATTTCCATTGGTTTCCACGT 439704 29 83.3 241 ...............TA........-..TG GCCTTACGGCCATGAGGCTTGCGGACGCTGTCAGCTGATGGAGCGACGTTCGAAGACTGAGGCTCACAACGTTGAAGTAAAAACCAGGTATGCAAGCTGGTACAGAAGCCTTACTTCTTAGGAGGTACCGAATCCTCGATCTCAGATTTCATCAGCCTTGCGAGCGTCAGCCTCTGCAAGCGTCAACCTTGTGAGCGTCCGGAACGAAGTTCCGCACTTCAGCGCATGATCCTTGCGCTTC 439434 30 93.3 39 ...............TA............. ATGCGTGTGTATGCGCGGATGCGTCTGACTTTAACGTTG 439365 30 93.3 36 ...............TA............. AAAACAAGCGAAGCGGTAAGGAAGCGGTAAGGTGGG 439299 30 93.3 37 ...............TA............. ACTTTTTTCTCAAGGTGTTCTATCTTTGAATGTAGTT 439232 30 96.7 39 .C............................ TTTCTTTAACCCCCTTTGTTCTGATATTGTTCAACTATA 439163 30 86.7 205 ..........................TGCG GCTGCGCCGGCCAGGCTTGGTTACGCCAAGGCTGTGCACTGCTTCGCAGTGGCTATGCGTTCCTGTGGAACGGCTTTGCGCCTTCGGCGGACCTAAACATATTCTATTCCGGCTCGAAGAGCCGCACAGCCGCGACGAAGGAGCGCAAGTCCACACAAAGTGTGCTAGTCCTGACGTAGTCAGCATGGCGCGTACGCTCTTTGCG 438928 29 76.7 0 CC...-...................ATGG. | A [438901] ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================================================= ================== 45 30 98.1 46 GTTTGGAAAGAACCAATGTGGTATGGAAAC # Left flank : TACATTTTGTAACACTTCTCTGTGATTTGCTACTATCCAACTTCACAAACGTTAGTTCGCTTTACGTATTGTCGGATCTCTGTTAAATTACGTTACATTTGTTACCGTCAGATGTTAAACGCTCGTTTTATACACCTTTAAATCGTACTATTTCTATTTTTATTAGTTGCTTTCAGAGCTTAATATATTCGTTACAGACCTTCGTCGAATCAACCGACCGGTAAAATTTTAGGTAATCCCCATCATTGGTTAACTACCCACGCTATTTAGAAATTCTCTAAAATCCTTAACAGAGATCCGACAAATCCTTGGTCATTTGACTGTCAACTCGTTTACATTTCAGGATTTTACGATATTTCTCTCCAGATGAGACATTTATGACTGCAACCCCCTTACTGATTAACTTTGCAGAAACATTTATTCCCATCCCTTCCAAAAATTCCCAAATTCCCTTGACTTAAGGCATTGCTTTCCCTTATAATTTACTTGTAATATATACT # Right flank : CTTACGGCCAGGTAAGCCCGGCTTACGCCGGGGGTACGCCCAGCTGCGCTGGGGGTGCGAACTCCTTCGGAGTTGTCTCGACTGGCTCCGCCAGTGATAAGGTCTTTTTGAAAATGAAAAATGAATTAACCAACATATAAAACAAGGGCACAGCATGCTGTGCCCCTACAATAGCGGATCTCGGGTCTCAATTGTCGTTTTAAGTGTCAATTTTCTCAACTGCGAAGCAGTTTATAACAACCACGAAGTGGTTCGAAACAACTCCGCAGGAGTTCGTGTCAATCCCGAAGGGATTCGTGTCCGCTGCGAAGCAGCCTTCTCGGATCTCGAATCTCAGTTCTCGAAGCTTTTTCCAAACCCCGGACCCTATACCCGTCCTTTTGTTCTTGCTGCCTTCGCAAGCGTCGCTCCATCAGCTGACAGCCTTGCAAGCGTCTTGTTTTTTCTCGAACTCTCAGATTCTCGGTTTAGACCTCATTCCAAACATCTATAAAAACTAC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAAAGAACCAATGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 530300-530723 **** Predicted by CRISPRDetect 2.4 *** >NC_012785.1 Kosmotoga olearia TBF 19.5.1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 530300 30 100.0 37 .............................. TTTGGCAGCGGGGGTGGGAATTGAACCCACTGACCTA 530367 30 100.0 35 .............................. GTGTATGAGCCTTCATCATTGATGAAACTATTTGT 530432 30 100.0 37 .............................. TCCTTTTTATTTTACGTAAAACTTTATATTCTGACTG 530499 30 100.0 36 .............................. TATTTTCGATGTCCGTAAAAGTACTACCAATAAATA 530565 30 100.0 35 .............................. AACACACTACTCACTCCTCGCACGCCGGACATAAA 530630 30 100.0 35 .............................. TAATGAACCTGTTGAGCTACCCGGGAAAGCGCCTG 530695 29 90.0 0 ........................-...TG | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 98.6 36 GTTTGGTAAGAACCAATGTGGTATGGAAAC # Left flank : TTCACTTTGTAACAGTTCTCTGTAATGTGCTATTTTTCTATTTCACACACGTTAGTTTGCTTTCCTTATTGTCGGATCTCTGTTAAATTATATTACGTTTGTTACCGCGAGATGTTAAACGCTCGTTTTATACATCGTTAAATCGTACTATTTGCATTTTTATTAGTCGCTTTCAGAGCTTAATATATTTGTTACAGACCTTCGTCGAATCAACCGACCGGTAAAATTTTAGGTAATTCCTATCATTGATTAACTACCCACGCTATTTAGAAATTCTCTAAAATCCTTAACAGAGATCCGACAAATCCTTGGTCATTCGACTGTCAACTCGTTTACATTCACAGGGTTTACTGTACCCCTCTCCGGACAACGAATCTATATCTTATCCCTCCTTACAGATTAACTTTTTAGAAATAATTATTTCTCTCCCTATCAAAAATTCCCAAATTCCCTTGACTTAACGCATTGCTTTTCCTTATAATTTCCTTGTAATATATACT # Right flank : GGCCTGTGGCCATGAGGCTTGCGGACGCTGTCAGCTGATGGAGCGACGTTCGAAGACTGAGGCTTACGACGTTGAAGTAAAAACCAATTATGCAAGCTGGCATAACAGCCTTACTTCTTAGGAGGTACCGAATCCTCGATCTCAGATTTCATCAGCCTTGCAAGCGTCAGCCTCTGCAAGCGTCAACCTTGTGAGCGTCCGGAGCGCAGCTCCGCACTTCAGCGCATGATCCTTGCGCAAAAAAATTCTATTCGAACAACTCTTCCAATGTGTAAAGCCGTATTGTTTCATCATTTTTTGCCCTCTCCAAAAGTTTGTAGGTAAAACCAGACTTTGAGAACAAAACGTATATTTTTTTCTCAGTATTGAAAAGTTCACTTTTTTCAACAAGTTTATTCAAATCAGAAATGTCAACTTTTCGATTCTGCCATTTACATTCGCCAAAAAGCATGCCTTCATTTCCTAGGCCAACAATATCTATTTCTTCCTGCCTCTTTTTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGTAAGAACCAATGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 719736-725466 **** Predicted by CRISPRDetect 2.4 *** >NC_012785.1 Kosmotoga olearia TBF 19.5.1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================== ================== 719736 30 100.0 38 .............................. TTCCCCTCATTCTTTTAAAAAAACCACGCTGGTGGAGC 719804 30 100.0 35 .............................. ATCTGCCAAGATAAGTAAAGCTGTGCATTTGACTA 719869 30 100.0 35 .............................. AAAGGTATTATGAAACAGGCAGCGACCAAGCAATA 719934 30 100.0 33 .............................. TTCCACACAGCCTTTTTTTATCATTTTTTTCTG 719997 30 100.0 33 .............................. CTTCTTTTTGCACTTCATTGATAGCTTTGTCTA 720060 30 100.0 36 .............................. CACGAATTACCCAAAGAGGTGCATGCCTAATCTTCA 720126 30 100.0 34 .............................. CAGAAATAGATATGGAAGACGTCATAAATACAGT 720190 30 100.0 37 .............................. TCCTCCAGCTTCGCCGGAATAAAGACCCTCCCGTTTT 720257 30 100.0 38 .............................. TATTTAAGATGTCGAGAATAGATTTCAAGACATCCAGA 720325 30 100.0 37 .............................. GTCGATAACAAGTATGCGCTGGTCCCCGGTCAATTCC 720392 30 100.0 35 .............................. AAGTGCCATCGACAGCCTCTCTTGCAGGCGGTACA 720457 30 100.0 37 .............................. TTCTAGTGATAGGTCGACTCGAAATCGACCACAGAGA 720524 30 100.0 36 .............................. AGGTGTAGTTTTGTCATGCAGGCGTGGCGGAATTGG 720590 30 100.0 33 .............................. TGCCATCAACCAAAATAGAAAGTGTACCAGCGT 720653 30 100.0 38 .............................. AGCTATCCTCTCGCCTTTCTTGATTTTCTGCCCCTCAT 720721 30 100.0 36 .............................. ACCTGCAAGCCGGAACGAAAACGAAGAAGTGGGAGC 720787 30 100.0 37 .............................. TCGATAAGAGCTTCAAAAGACAGTGTTCTAAAATATC 720854 30 100.0 35 .............................. TACATTTTTCTCCATGTGTGTCAAAATGGCAAAAA 720919 30 100.0 37 .............................. ACCAGATGGGAAGAGCTAATGAAAGAAGGCGAAAAAG 720986 30 100.0 32 .............................. TACTGCTCCATGCTCTGGTTCCCATTGTTCCC 721048 30 100.0 39 .............................. TCGTATATTTGCGGCCAATTTTCCGATAGATAGGTTCTG 721117 30 100.0 33 .............................. TTGAAATATTGGGTACAAGACTGCAAAAATAGA 721180 30 100.0 36 .............................. CGAATAGCAACGGCCAATACAGCGAACAAACGAATA 721246 30 100.0 35 .............................. CAACTTCTCGAGAGGCTGCCAGAGGGTAAGATTCT 721311 30 100.0 35 .............................. TACTGCTTAACGGTGGTACTTGACCGTTGCGAATA 721376 30 100.0 33 .............................. TCGCATTTTCTTATTGCATTCTAATTACATGAA 721439 30 100.0 35 .............................. ACGCCAACCACGCCTTCAAATATTTCTTCGCTTGT 721504 30 100.0 35 .............................. CTAAGAATACCATTGAATGGTTAGATAACATTTTC 721569 30 100.0 35 .............................. CGGAAATGCGTGAAGATGTTGATTACCTCGGTTTC 721634 30 100.0 38 .............................. AATTTATCGAAAAACTTCGTAAGCGCACCAGCCGCCCA 721702 30 100.0 36 .............................. TTTGCCAACGTAGTTTTCCCAATCATCTGGAATTTC 721768 30 100.0 35 .............................. AAGCTATCTCAGAATCTTTTGGCAAGCAAGTTGTC 721833 30 100.0 34 .............................. TTTCCTTGTCTTCACCTTGATCATTTACAAGCTT 721897 30 100.0 34 .............................. TATCACCTTTAGCCGAATATAGTCTAATCCCATC 721961 30 100.0 34 .............................. TCGGTTTCCCGGGTCGAGGGTAATGCGCTCTCGC 722025 30 100.0 37 .............................. AAGAACTTCCGAAACATACGGAGTATGCCAGTATTCC 722092 30 100.0 35 .............................. TCCAGCATTCCTGCGGTATCTGCACCGAAGATGTA 722157 30 100.0 38 .............................. CCTCAAATCTTTTTCATACTCTCTGCGCGTTTTATCAA 722225 30 100.0 35 .............................. ATATATAGCATGAATTCCAACGCCATTATTTTGAG 722290 30 100.0 35 .............................. ACAAGATAATAGTCTACCCAGGCAGCTACATGAAA 722355 30 100.0 34 .............................. AAACTTTTGGGAGATATAATCCGTTGAACTTTAT 722419 30 100.0 34 .............................. TCCTTTAGAACACATGGGGCTCAAACGTCCGCGT 722483 30 100.0 36 .............................. AATACCTTTCCGCTTCCGCAGGATACTTTTCACTGC 722549 30 100.0 38 .............................. TTAACCATCTGGAAGCGTTATCGCTGTCAGACTCGATA 722617 30 100.0 34 .............................. CTCCTACCATAACCTTTCCACCATATCCAGCTAT 722681 30 100.0 35 .............................. ACTAGTATCATCTGATATAATTGCGATATTTTCAA 722746 30 100.0 36 .............................. GCAACTCCTCGCAGCGATAGCGATGGTTGAAAGTTC 722812 30 100.0 35 .............................. CAGTATTCTGATAACCCACGGTACTGACTATTTTC 722877 30 100.0 34 .............................. GACCTATACACGGGAATGTTGTGGCGTCTTTCGG 722941 30 100.0 35 .............................. AAGGCAATCACCCCCTTTGGTTCGTTTTTACTACC 723006 30 100.0 33 .............................. TCCATTTTACTGCTTTCGACGCCCCTGTTTTTA 723069 30 100.0 36 .............................. AGTGTTGGTAACAGTACGACCGCTTCTCAAGTATCT 723135 30 100.0 34 .............................. AACTACTAAATTTCGCTTTTTCATCTTATGCCTC 723199 30 100.0 34 .............................. TTCTGCTCTTGAGGGGAAAGCTCGTAAATCTTTA 723263 30 100.0 39 .............................. TGATTGATGGAGATCCTCAAAGCCACATGACTCATGCTC 723332 30 100.0 40 .............................. AGATAGGGCAGGATGCTGACGGCAACGGATACGTGCGAGC 723402 30 100.0 33 .............................. CTGCAACACCACCTCCCAATTTGACCATGTCAA 723465 30 100.0 37 .............................. TCGGTTTCTCGGGTCGAGGGTAATGCGCTCTCGCAAA 723532 30 100.0 34 .............................. ACTTCATCGTAGAAGCGTTTGTACAGCTCATTCC 723596 30 100.0 33 .............................. TTTTGTTTCTTTTCTATCTCGCTCATTCTCTCC 723659 30 100.0 34 .............................. GCGGATGCTTCCGCTTTCGTTGTCGGTGATTCTG 723723 30 100.0 34 .............................. TACGAAAAACTAAAGAAAAGGGGTGGGGAAAATG 723787 30 100.0 37 .............................. ATGAATTCCTTAAAGAAGTTAAGGAGGGAGAGGAAGA 723854 30 100.0 34 .............................. CTGCTGGTTCTACGTCTGATGCGATAGGGATATC 723918 30 100.0 35 .............................. TGTGCAAGCCACGCTCCGGTAGCGCTTCCAATCTG 723983 30 100.0 38 .............................. CTCGGAGAGATAGATATAGACTCGAAACTAAGCTATGA 724051 30 100.0 36 .............................. AAGGAAGCGCTAAGAGAATACATGGAAAAGCTTGAC 724117 30 96.7 35 ....................A......... TACCTTATTACTTTTGGAAGAGGAACAGCGGTATT 724182 30 100.0 36 .............................. CTACGTCTCCTTCTTCCATCTCAATCTTTATTCTTG 724248 30 100.0 37 .............................. TCGTACATGCCCTCCAAAATCTTCGCGAAGTTGTTCG 724315 30 100.0 34 .............................. CTCCTTCATGGGCATTCAAAATGCGGTCACGGTC 724379 30 100.0 37 .............................. GAAACTTCAGATTCTGAAAGGCCTGTTTCAAATGCTA 724446 30 100.0 34 .............................. CATTTTAGCTCCTGTTTTTATGATATGTGGTGCC 724510 30 100.0 34 .............................. TATGGCCTTCATATCCCAGTAACCCACATAACCG 724574 30 100.0 33 .............................. AAAACGATAGACGTTTATGCCTATCTCTATATT 724637 30 100.0 36 .............................. TTTGCCAACGTAGTTTTCCCAATCATCCGGAATTTC 724703 30 100.0 35 .............................. TATCGAATAAAGGTATAAAGCACCATGATTGCATA 724768 30 100.0 34 .............................. AGGGCATTGTTGCCCTCATGGAGGCAGCGAGGTA 724832 30 100.0 35 .............................. GGTAATTGAATGCGAGTACTCGCAAGGGTGGCGGG 724897 30 100.0 39 .............................. TTAAACAGACTCCGAAGTTATATGGATTTAGACCACCGG 724966 30 100.0 36 .............................. CACCTCTTGCTTCGCCAAGGGTTTCGTCGATATGCC 725032 30 100.0 38 .............................. TGAACCACACAGATGAGGGGCAGAAAATCAAGAAAGGC 725100 30 100.0 38 .............................. ATTTGATACTGAAACATTTCGAATTATTATTCTATAAA 725168 30 96.7 35 ............T................. TAAAAATGGCAATAATTTTGTTGCCGATCAGGTTT 725233 30 73.3 110 ....T...GT.......A...GC.A...G. GTACACCGTGATACCACTACTATTGACACTCTACCGGTTTTTAGGTCATCTGTAGGGGGGAGAAGTTCCGACAACATGATATACTACATGTAAAATTGTGTTATGTAAGT 725373 30 80.0 35 A........T..A...CA....G....... AATTCCATCTTCTGGAATTTGATGTTCTGACATTT 725438 29 80.0 0 A...G............A.......-.C.T | ========== ====== ====== ====== ============================== ============================================================================================================== ================== 87 30 99.2 36 GTTTATAGAATACCTATGAGGAATTGAAAC # Left flank : GCCTGCTGTTATAGAGGGGACCGCTTTCATGAAAATCTGGAAGTTTCTTCGAGACAATTTTGAAAATTAATGACTGAAGCATATGATTATAACTTATAGGAAGATCAATACTTTTATTACTCTCAAAAGCCAAAACGATTTTCACTTATTTCCTCCTATTTTTACCGTCAAGACACAGAAACCAAAAACACACCTTAAGTTTTGCAAGGGCATTTCTTTACGCAAGTATGCTTATTTTATGAAGTAACTCAATTAAATACTAACATATTAATTGTGTTGAATGCAAATATTTAGCATTATGTTATTTTTTTCAATCTGCTGCCACATATAAGAACATGTCGATGTCTAATAAGCAGAAATTCCTAGGAGATCGACAGAAACTTGTGAACTAGCGCAAGCGTCATTATTGGGTGAAAAGCTAAAATAAAGGGTGAAAAATTCCTTCAAAATTGATATTTTTGAAAAAACCACAAAAGGTTATATAATCTATATAGTAATTG # Right flank : TTATTATTATTGTCAAGATAAGTTGGATCATTTGGTGTAGCGTACTTGGATGGAAGTTTCTCTTGCACAAAGATTTGTCTTATTTATAAACCAGAATCAAATAATCTCAGGTGTGGTACTACACATTTTAATTACCAAAAACATTATCCGCAACAGGTTTTAGGCTGTAAAAAAACATAAATGTTTCGACTGTGATTGGCTTCCAATAATAATTACCGATAGTGATTTAAGGGAAGTTTTAACCCCCAGGAATATAAAAACATCTTTCAAGGTAAAAAATGCCATGCGAATCCGGAATTACAGGCCAACCTTAAAAGCTGAATCCCTTGTGACTCACGATATTCCGTTATCTTCTGAATTCTGTTGGTGGCATTTTTACTATTTTATAACCGCTGCCGACACCGTTGAATCTTTTGACCTCGTACATGTTTATCACCTCTTATCCATCTCCTTGAACAACTTGTTTCTATTATCTCGCTCAAGAAGGTCTTTTTTTCCAG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //