Array 1 3575991-3573403 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073782.1 Klebsiella pneumoniae strain IRQBAS106c-genome chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3575990 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 3575929 29 100.0 32 ............................. GCCTCAATATTACCGGTGGCTGGCGCTGGGAT 3575868 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 3575807 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 3575746 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 3575685 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 3575624 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 3575563 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 3575502 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 3575441 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 3575380 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 3575319 29 100.0 32 ............................. CATCCCCTGCAACCTGTTCAAAATGTGCAGCA 3575258 29 96.6 32 ............................T GGCACCCCATCATCTCCCATCGTCACCTTTAC 3575197 29 100.0 32 ............................. ACGCGGGAAAACCACTGCGATCCCTCATCGCT 3575136 29 100.0 32 ............................. CAGCTGGCCGTTTTGATATGGACGACGCGCAA 3575075 29 100.0 32 ............................. TGCCAGCCAGCTTTGCGCGCCTGCTGAGATAT 3575014 29 100.0 32 ............................. GAGGTGAAGTTATGCCGCGAAACTCAGATATC 3574953 29 100.0 32 ............................. CACGGTTTTCAGGAATTTAACGAGAACCAGGC 3574892 29 100.0 32 ............................. CGCAGGCGTGTGCCGTCAATGTCGGCGCCATA 3574831 29 100.0 32 ............................. CATATTAAACTCATTGTTGCCGGCGCAGAATT 3574770 29 100.0 32 ............................. CATTTTATGGCTGTTCAAAATTGGCTATAGTG 3574709 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 3574648 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3574587 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3574526 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 3574465 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 3574404 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3574343 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3574282 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3574221 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3574160 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3574099 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3574038 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3573977 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3573916 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3573855 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 3573794 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3573733 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3573672 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3573611 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3573550 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3573489 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3573431 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5185658-5186600 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073782.1 Klebsiella pneumoniae strain IRQBAS106c-genome chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5185658 29 100.0 32 ............................. GCTGTCAGTACTCAACGTTATAGAAATTCCTC 5185719 29 100.0 32 ............................. GAGTGAAAGTGATAGCAAGAGTGTAATGGCTA 5185780 29 100.0 32 ............................. GCAACTATTGCCTGCATTGCTGTAGACAAATC 5185841 29 100.0 32 ............................. AATCAATACGCCCTGATGCTTAAAAATGGCCG 5185902 29 100.0 32 ............................. AGCAACGTTTCCGGATTATATGGCTGGAACGT 5185963 29 100.0 32 ............................. TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 5186024 29 100.0 32 ............................. TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA 5186085 29 93.1 32 ............CA............... AGGTATTTGACCTCATCCAGAAAGGCACAGAC 5186146 29 93.1 32 ............CA............... GCACCCTCACGGATACCTTTTGCACAGTGTTA 5186207 29 89.7 32 ............CA..............C CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG 5186268 29 100.0 32 ............................. CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 5186329 29 93.1 32 ............CA............... TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 5186390 29 93.1 32 ............CA............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 5186451 29 96.6 32 ..............A.............. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 5186512 29 89.7 32 ............CA...........A... CACTACCAGATCCGAATGGACACCCGTAATGA 5186573 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 16 29 95.7 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTGCGCCGGGAGACCGGTTAGAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCCACAAGGTCCCCGAGTCATGCGTTGCATACCGCGAGGTATGGGGCGAAGCGTTGACAGGGGTGTTGACAGGCCAGCCATTCTGGCACCATCGAACTGCCGG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //