Array 1 3828478-3827489 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNRP010000001.1 Klebsiella oxytoca isolate 145, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3828477 28 100.0 32 ............................ TTATCCACGGCTTCCAGCAACTCGGGGTTTTC 3828417 28 100.0 32 ............................ AAATGGGCCGCCAACGAAAGCAAGAGCACCTC 3828357 28 100.0 32 ............................ AATACTGGAAGGATATTAAGCGTGGCGGTATT 3828297 28 100.0 32 ............................ ATATCCGCCGCGCCGGATAAGCCTTGCTGCCC 3828237 28 100.0 32 ............................ ATCGTGTCTGGGAGAATGTCTTTGCTCATAAT 3828177 28 100.0 32 ............................ TGAAATTGATAGAAGGTTCTGAGCAAACCTGC 3828117 28 100.0 32 ............................ ACGATGTGAACGCTATCGCTATGCACACCACT 3828057 28 100.0 32 ............................ TCGGTGCGCAGTCCAGATATTGCGATATACAC 3827997 28 100.0 32 ............................ ATTAAAACCAATAGTCTGACGATCCAGCGCCA 3827937 28 96.4 32 ..........C................. AGATAGCACCGCCTGGGCGCATATCTTTCGCC 3827877 28 100.0 32 ............................ CGATGCCTCCGATAAGAGAAAAGGCGTTCTCT 3827817 28 100.0 32 ............................ CTGGAAACATAGCAAATGGCACCGTGTTACAA 3827757 28 100.0 32 ............................ TCAAAAAGTACGGACGGTGGACGGTGAGCGAA 3827697 28 100.0 32 ............................ ATTCGCGTTAACTACGAAGACAGTAACGGTAA 3827637 28 100.0 32 ............................ AGATAGCCACCGCCGAGTAAGACGATTGCCCC 3827577 28 100.0 33 ............................ CTGACCGGTATCAATTACGCGCAAATCCATTTG 3827516 28 92.9 0 .........................TG. | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAAAAGGATGGCGTTGCGTCAGTCGGGTACAGGTAAAAAGCAGCCCCGAGCGGCTGATGCGCCGCTCGGTGAGAAAAGGCTGGCTGACACAGGATGAAGCAAATGAGCGATTGCTTAGCATGCGGGGAGAGTCGACAGCGCTCCCCTGGTTGAATATGAAAAGCCTCTCAAATGGGCAGAAGTTTCCGCTATTTATTTGTCACGGTGAGCTGCTGGCGCAGCGCGTCGCGGGAACATTCAATAGCTATGGGCTGAGCCATATCGCGACTATCCCCTGGTTTTAGCATGTTGGTGAGAGTTTTTGACGAGTGCTAAAACAAACCATAACCGGCGCGGTCTTTCGCGCCGATTTTTCAATCGCTAATTAAAACCCTTTTTTATGATGAATCTCTATCTTATTGATTTTATATAGTGATTTTATAAAAGTCGGAAAAAGGGTTGTGAAGAGGGGAAGGCGTTTTTTGGCTTTTTTATCAGATGGTTATAGTGGTTAGGCTTCA # Right flank : TCGTGGCGGTTACGGGCGCAGAGACAGGGCCGTCAAAGCCGAAGAGGGAAGCGGCGTGAGAATAAAAGAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGTTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTGCCCGTAATTCACGCGGATAAACCGGGCGACAGGCGCAAACGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3838256-3836906 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNRP010000001.1 Klebsiella oxytoca isolate 145, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3838255 28 100.0 32 ............................ AAAAACTGAGCGGCCGCAGAATGAAGTTGTAA 3838195 28 100.0 32 ............................ TCATTTGGCGACGTGCCTTGTGCGCGCATTTC 3838135 28 100.0 32 ............................ GTCAAAAGAATGATTTCCTGCACAGGGTTCAA 3838075 28 100.0 32 ............................ AGGAGCGGGTCATATTCCACCGTCGCGGCTTT 3838015 28 100.0 32 ............................ GGAAGACTGGCCTAATTATGAGGTGCGTTATC 3837955 28 100.0 32 ............................ TGCAGCAGCGGGTAACGTTCCTGACGACGACC 3837895 28 100.0 32 ............................ CAATACTCACCATTGATGAGCAACGATAAAAA 3837835 28 100.0 32 ............................ GTAACCGCATGTCGGCTTTTGCTGCATGGTGG 3837775 28 100.0 32 ............................ TTCGGCCATACCGCGATACGACGCTTAACCAG 3837715 28 100.0 33 ............................ TCGACGCGCTGGCCTCGCTGCTGATTTCTACGA 3837654 28 100.0 32 ............................ TACCGGACAACGATCACCCATTGTCATGTAAC 3837594 28 100.0 32 ............................ TGTAATGGCATCGGGAGGCTGTCATGTGGATA 3837534 28 100.0 32 ............................ GGCTGCGTCGGGACCCACCACATCGCCAGCAG 3837474 28 96.4 32 ........T................... CCTGGCCCCGGCAGTATCTATGATGGTCAGGG 3837414 28 100.0 32 ............................ GGAAGAAATCACCGCCATGCTTACCGCAGGAG 3837354 28 100.0 32 ............................ TGCCGTGGCGGGGTTGGCTCCAGCCACAATCC 3837294 28 100.0 33 ............................ TGCGGCTGCACGACCAGCGTCAGGGAAATCACT 3837233 28 100.0 32 ............................ CTCTTCGCGTCTGCGATACCGGAAACGGAGAC 3837173 28 100.0 32 ............................ ATGCACCGGTAGAAGAACGCTGATCAATTGCC 3837113 28 100.0 32 ............................ GTAAAGACGCTACCAGGCACATCGCTGAATAA 3837053 28 96.4 32 ............G............... TCGACATCGCCGAGAGCGGCGTAGCCGTATAG 3836993 28 92.9 32 ............G.......A....... TGCCCGCCGAGCCGGAAAGCGACAGCGGTAAA 3836933 28 92.9 0 ....T.C..................... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTATCCATCAGGTGGTGGATAAGTTTATCGTTGAGCTGCAGGTCCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTAAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGTTACGACCGGGCCATGGGCGCGCGTCCGATGGCGAGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGTCAGGTGATCGTTGAGCTGGATAAAGAGAAAAATGCGCTGACCTATGCCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCGGCACATTAAGTCGCTTGCGTGAAACGTCAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCGATGTCCTGGACCCTTTTTTATTCCCCTTTTTTAAGCTATTGATTTTATTAAAGAGAAAATCTGGCGTGAAATTATGGTAGCAGAGAGGGGCTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTCGTTCGTTCA # Right flank : AGAGCTTGCCCATACTGCGGTGCAGGCTAAAACGATTCTAAAGAATTTGCCAAAATAATAGGCTATTTTGCAATTTGCGATGAATGTCAACGTATTACCTCTAATATACTGTTTTTATAAACAGCTATCGACACCGAGCCACAGGATGTGACTATGCCCGCGAACTATATTGCCCCGTCGGATTTAAAAATGATTCTCCATTCGAAGCGCGCCAATATTTATTATCTGAAAAAGTGTCGGGTTCAGGTCAACGGCGGCCGCGTGGAATATGTTACGAGCGAGGGGAACGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCTATTATGTTGGGAATGGGAACCTCAGTTAGCCAGGCTGCAATGCGTGAGTTCGCCCGAGCGGGCGTAATGGTCGGTTTTTGCGGTACGGATGGCACGCCTCTTTATGCCGCTAATGAAGTCGATATTGACGTTTCCTGGCTGTCCCCGCAAAGCGAATATCGACCAACTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //