Array 1 18714-17996 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AHBC01000040.1 Halomonas sp. GFAJ-1 strain ATCC BAA-2256 contig_c40, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	====================================	=================================	==================
     18713	    36	 100.0	    32	....................................	TGAGTGTTTGGCATGATCCAAACCTCTTGATC 	
     18645	    36	 100.0	    31	....................................	AATTTTCGGCGCTCAGGATTTTCGAGATTCA  	
     18578	    36	 100.0	    33	....................................	ATTTTGATGGAAACGGTCTGAATACCATTTTCA	
     18509	    36	 100.0	    33	....................................	CTTAGTGGTATTAGTAGGATAACGACGCAATAT	
     18440	    36	 100.0	    32	....................................	GATAGCCGCCCACTGCTCAATGTCTTCGTTAT 	
     18372	    36	 100.0	    33	....................................	TCCCCTTAGGAAGGTAGGGTCATCGTATTTAAG	
     18303	    36	 100.0	    31	....................................	CGTCGCCGGAATCGCCAGAGCCATTAGCATC  	
     18236	    36	 100.0	    33	....................................	AACCGACGATGACGGCACAGACTAGATACACCT	
     18167	    36	 100.0	    32	....................................	TCGCTGGGTGGACTCCCAGGTCGTACAGGAAA 	
     18099	    36	 100.0	    32	....................................	TGCGCAAGTCGATTCCACCCCTCACGGGTTAG 	
     18031	    36	  91.7	     0	................................GC.A	|                                	
==========	======	======	======	====================================	=================================	==================
        11	    36	  99.2	    32	GTCCGGATCCTTCCCTGACTTTGAAGGGATTAAGAC	                                 	       

# Left flank :   TATGCCCGCACTTTGGCGCGTAAAATTGACCAACACCGCCTACCTGAGGAAGCCCTATGAGCGATACACAATGGCAGATCATCGTTTATGACATCCGGGACATTAAACGCCTGCGCAAAGTGCATGGCCTGCTCAAGCGTTGCGCCTTTTCCCTGCAGGCCTCCGTCTTTGCATGGCATGGCACCCCCCGCCAGCTACAGCGGCTCAAATCGGAACTCGCCCTGGCGATAGACCCAAAGGCCGACGATGTTCGCGGTTATCCGCTGTTGGCCGAACACAATATCGTTTGGTGGGGAAAGATGCCGTTACCCGCGGGGCTGCATATCGAAGGCTTTCCAACGCTTGAGCAGCGCGGTTTTTTCGGGCAAGATGCCCCTTGAGGCTCATTAAAAATCCACTTAGCACATCCAAGGAAAACAAGCAAACTTTTCATGGCAAAAACAGTCATAAAATTTCGCTTCCAACCCTTTGATAGTCAACGACTTTTTAAAGGCCTCGGG
# Right flank :  GGGAAAGCCTTGGCCGTTCGCCTAGTGGCGTAGTGCCAAGAACCGTACTTACAATATTCACCATCAATTAGTCGCGGATTCAGCCGCAAACAGATCGTGAGCTGTAGCGTCTGGTGCCTGCGCGTAACGAAATGCTTTTTCCAACGTTGCTAGCCCAACACCTTTTACTTGCAATAACTGGTTAAGCTGAACAATGTCATCTCTTTGCAAGGCCTCACGTAGATTTTCCAGTGCTTTTGGCTTCAAACCACTCGCGTTTTGGATATGGACACTGGTTTCGCGGAGAAGGCGCGCTTTGAAGCGTTCAAATACGTCATCATGGGCAGTGGGATCATAGCGGTACACTTCTATATGCAGGCCTTCATGGCCGTTCGCTAAATGCTCTTGTATAAGGCTTAGGCTAATCTCTGGATCAATCCCCCCTTTATCGGCACCTAGCAGCGGCATCGCAATAGAGCGGATTCCTTTCTGGGCATAAGTGGCGGTGAATTTTTCTAGCC

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCGGATCCTTCCCTGACTTTGAAGGGATTAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.00,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,1.05   Confidence: MEDIUM] 

# Array family : NA
//