Array 1 182800-180125 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGZY010000003.1 Klebsiella pneumoniae strain 5012STDY7626376, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182799 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182738 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182677 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182616 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182554 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182493 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182432 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182371 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182310 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182249 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 182188 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 182127 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 182066 29 100.0 0 ............................. - Deletion [182038] 182037 25 82.8 32 ----C........................ CCCCCGCGCACATGCTTAAACGCGCTATCACG 181980 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181919 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181858 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181797 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181736 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181675 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181614 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181553 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181492 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181431 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181370 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181309 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181248 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 181187 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 181126 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 181065 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 181004 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180943 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180882 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180821 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180760 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180699 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180638 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180577 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180516 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180455 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180394 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180333 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180272 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180211 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 180153 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.0 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //