Array 1 166903-164375 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTFP02000164.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0354 CRK0354_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 166902 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 166841 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 166780 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAACCC 166720 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 166659 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 166598 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 166537 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGAAACCCCATAGC 166476 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 166415 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 166354 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 166293 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 166232 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 166171 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 166110 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 166049 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 165988 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 165927 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 165866 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 165805 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 165743 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 165682 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 165621 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 165560 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 165499 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 165437 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 165376 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 165315 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 165254 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 165193 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 165132 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 165071 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 165010 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 164949 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 164888 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 164827 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 164766 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 164705 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 164644 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 164583 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 164522 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 164461 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 164403 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //