Array 1 4837476-4841865 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072203.1 Gordonia polyisoprenivorans strain R9 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 4837476 36 100.0 38 .................................... TCGCCTTCCCACCACACTTGCCGTTCGGCGCAGGCGGC 4837550 36 100.0 36 .................................... CCACTGCGGGGCATCGTCCTGGTCCTTGCCCGCGGT 4837622 36 100.0 37 .................................... CCGCCGTCGCGGTCGCTGACGCGGCGCCGGCGAGGCC 4837695 36 100.0 38 .................................... TGCCGCAGTGTTCGCAGCGGTGGCGTCGCTCACGGTGT 4837769 36 100.0 39 .................................... TCGGATCAACGCCGCCAACGATGTGATCCTGCGCTACTT 4837844 36 100.0 38 .................................... TGCCGCAGTGTTCGCAGCGGTGGCGTCGCTCACGGTGT 4837918 36 100.0 36 .................................... CTGATCGCCATCGGCTCCGGCGTCAATAGCGTTTCG 4837990 36 100.0 38 .................................... CTGCTGCTTGGGTGGCAGCCCGGCGAACGCCAGCGGGT 4838064 36 100.0 38 .................................... CCTATCTTGCTGCTGGCGTTCGCTTGGTTTCCAATTGG 4838138 36 100.0 38 .................................... GTTGATCGTGAATCGAACAGGATCCGCCGTCTTCGACT 4838212 36 100.0 39 .................................... GCCAAGGCTGGATTGATCATCCAGGATCTGCTCAACGGC 4838287 36 100.0 38 .................................... CCACGACCTCGAAACCGTGGGCGCATCCCGTCGCAGGG 4838361 36 100.0 39 .................................... CGGCAACGCTCACCGAGCAGCTCTCGGCCATGGTGTTCA 4838436 36 100.0 39 .................................... GCCAGCGCCGGTTGCGCGCGCACCCGCCGACACCGCCTG 4838511 36 100.0 37 .................................... TCACGAGGTTCACTGCGTTGTCGATGCCGGTGCGGAA 4838584 36 100.0 39 .................................... CTGATGCAGGCCGTCGCGTCCGCGCTCGTCGCAGCCAAC 4838659 36 100.0 38 .................................... AGGCCCGGCACCCTCGATCGTCATCCCGTTCAGTCCGG 4838733 36 100.0 36 .................................... CGTCTGGTGCAGGGGTCGTCGTGACGCGCCGCACTG 4838805 36 100.0 36 .................................... ATTGCTCCGAAACCCGAAGACGAGCGTGTCGATGGC 4838877 36 100.0 39 .................................... GACTCGCGGATCGGGCCGCCGACCTCGACGACGAGGCAC 4838952 36 100.0 39 .................................... TCCCCCGGACCTCCGCTTCGGCGACGCGGGCGGCGAGAC 4839027 36 100.0 38 .................................... AGTCGCTGTGTGCCGCGGGTTCTCGTGCCGCCGGCGAG 4839101 36 100.0 39 .................................... CACAGTCGACCGCGTCAACTGCCATCACAACTACACCGT 4839176 36 100.0 38 .................................... CCGCCCGCACACGAGAGCAGCGTCGAGCCGGACACCGT 4839250 36 100.0 39 .................................... CCTGCGTCAGATCCTCAACGGCAAAGGAACATGACACAC 4839325 36 100.0 38 .................................... GCCTTGCTTGGTCGCCAGCTCATTCCACTCTTGCTGCG 4839399 36 100.0 39 .................................... CGCGAAGAAGCAGGAGCACGACAACAACCAGTTGGACGC 4839474 36 100.0 38 .................................... ACCTGGGCGAAGCCGCGATCGGACTGGAGCTGGAAGCC 4839548 36 100.0 36 .................................... CGCAAGAACGACTACGGCGAGTGGGAACGAGTCAAG 4839620 36 100.0 39 .................................... GCTCGGCGACCTCGGCGACTGGATCAAGGACTTGATCGA 4839695 36 100.0 37 .................................... GGTCCCACCGCAACGCGGCGGCGAGTCCGTAGTCGTT 4839768 36 100.0 38 .................................... TGGCCGCCACCGAGGCGGGTGCCGCCGGTCCACACCTC 4839842 36 100.0 36 .................................... GACCGGCACACCGCGGCGGCGGCCGCCCGTCTCCGG 4839914 36 100.0 37 .................................... GGGTGCAACACTTCCCGGCGATCCGACCGGCGAGATC 4839987 36 100.0 41 .................................... CTCACCCGACGAGCCGTGACCCAGCGTGAAGCCCATCGACT 4840064 36 100.0 40 .................................... TTCCGCCTGCCGAGCCGGATGACGCGTGGGGCGACACAGA 4840140 36 100.0 38 .................................... CCCTTCACGACCTCTGGAAGCCGACCTGCGAGCGCCTT 4840214 36 100.0 37 .................................... CCCCAGGATGGAGAATAAGCGGTGGAGACTCGTAACG 4840287 36 100.0 37 .................................... TCTCGGCCGCCCACGCCTCGGCAGCCTTCTTCGTCGG 4840360 36 100.0 36 .................................... TTGATACCGGCGCCGAACTACCCGTCTTCCCGCCTC 4840432 36 100.0 39 .................................... GGGGCGGCTTCCAACCGCACCAACCGCACGTCAGGAAGT 4840507 36 100.0 39 .................................... CTGGTACGCCGAAGACCTGCAGCTGGTGCCGGCATGACC 4840582 36 100.0 35 .................................... AACTCCCCCGGCCGATATCCGCCCTGCCCGAACAT 4840653 36 100.0 39 .................................... TCCAACTCTCTACCGTCTGGCCGGCCGATCGGCCTACTC 4840728 36 100.0 38 .................................... ATCAGGCGGGCGATCGGGTCCTCGTCGTCCTTGCGGCC 4840802 36 100.0 36 .................................... GCAGCGGCGGGTGATCCGGCCCCGGATACCGGGGCA 4840874 36 100.0 37 .................................... ACACCCACACCCATGCCACCCGCATCAATCAGCGACA 4840947 36 100.0 34 .................................... CTGACGAGGACGGCGAGCCGCGGTTCGTACTGAC 4841017 36 100.0 39 .................................... TCCCCGATCCGACGCAGTGGGTAACATTCCGTTCGACCC 4841092 36 100.0 38 .................................... CCCGAGCGGGCCTCGGACGAGGTTCTGGCCTACCTCGT 4841166 36 100.0 36 .................................... GGGCCCCACAACCAACCACCGACCGACACCCTACCC 4841238 36 100.0 39 .................................... CCGAAGATGGATGTATTCGGCGATGTCGGAGTGGTCACC 4841313 36 100.0 38 .................................... ACGCAGATGACGAAGTACGCGGGCGCGCAGATCGACCC 4841387 36 100.0 40 .................................... CCAGTCCTGGGGCGCTGGGCGGATTGGCTGTTGGATATCC 4841463 36 100.0 39 .................................... GAGGTGAGGTAGACCCACGCGGCGATGCGGGCGGCAATC 4841538 36 100.0 39 .................................... TCCTCGCTCTCGACATTGGCACCCAGTATGCAGCGGACG 4841613 36 100.0 36 .................................... ACGAAGAATGCGGTCGTGGCTGGGGCGACTCAGGCA 4841685 36 100.0 38 .................................... GCCGACTCGACCGAGTCGACCCAGCGCGACATCTTCCC 4841759 36 100.0 35 .................................... TGCCCACTGCAATTGCCCTCCAGACCCGTGGCCGC 4841830 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 60 36 100.0 38 GCTGCAATGGAACCCGGCCGTGAAGACCGGGAGCAC # Left flank : AAAGCCGTGGCCGGGCAGATCCCGGTCAAACGGAACCGGTTCGTCACCCTGCAAGGCGGTGATAAACACGTCAACCGCGCCCTGGAAACCAAAGCCCGAACCCTGGCCGGGTGGAAAGCCTATGCCACCAATATCAGTTCCCCGACACCAGATTTCGTGATCGGCTCCTACCATCAGTTGTGGCGGATCGAGAAAAGCTTCCGCATGTCCAAAAGTGATCTGGCCGCCCGCCCAATCTTCCACCACCTCGAAGACTCGATCCGCGCACACCTGACGATCGTGTTCGCCGCACTGGCCATCACCCGAATCATCGAAACCCGCACCGGCTGGTCGATCAAGAAGTTCGTCACCACCGCCCGCCGCTACCGCACCATCACCATCCAAGCCGCCGGCCATACCCTCACCGCCGCCGACCCCCTACCCGCCGACCTCGCAGACGCCATCACCGCCATCAGCAGTGGACACTAAAATGCGCCAAGTCAGGCCGCTCCGTCCGGCGA # Right flank : CCGCTCGCGAAATTCACCATTCCTGACCTGCAGAAACGAAGCGTCCCGCGAGGGGTGCGATAGACGGAGTGCTCGGACCACTTTACCTTCGCATCTGAAGTTCTCAAAGAGCGCTTTGACCAGCGTGCGAGCGCTGCCCAGGGTATGTGTGGCGGACTCACCGCTCGCGTCCAGGATCACACGACCGTCGGTCCAGACGCCGGCAGATTACGCGGACGACCCAACTGGGTCACGGTCGCCGCGCTTCCCACTGCACCCAGGTCGATGACCACCACAGAATCTTCACCGTAGTCCATGACTCCGTGGATATCTGTTCTCCAACGAGTGCGTTCCAGCTCGGAGAGGTCGCAGAGAAAGACCGAGTACTGCAATCTGGTGCCGTACGCTTCCATGACCTTGCACACCCGCCTCAGTCTCGCCGGCTCGCAAATGTCGTATGCGATGAGGTGACGTCGTCTGGCCATCGCGAATCACCTGGTCACCATCGGTGTGTACGTGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCAATGGAACCCGGCCGTGAAGACCGGGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //